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N Use By Plants
Nitrate Assimilation
Ammonia Assimilation
Glu, Gln, Asn, Gly, Ser
Aminotransferases
Asp, Ala, GABA
Val, Leu, Ileu, Thr, Lys
Pro, Arg, Orn
Polyamines
Non-protein AAs
Alkaloids
Sulfate Assimilation
Cys, Met, AdoMet, ACC
His, Phe, Tyr, Tryp
Secondary Products
Onium Compounds
Enzymes
Methods
Simulation
References
HORT640 - Metabolic Plant Physiology

References, sucrose and synthesis

Ainsworth EA, Rogers A, Leakey AD, Heady LE, Gibon Y, Stitt M, Schurr U. Does elevated atmospheric [CO2] alter diurnal C uptake and the balance of C and N metabolites in growing and fully expanded soybean leaves? J. Exp. Bot. 58: 579-591 (2007).

Alba R, Cordonnier-Pratt MM, Pratt LH. Fruit-localized phytochromes regulate lycopene accumulation independently of ethylene production in tomato. Plant Physiol. 123: 363-370 (2000).

Albrecht G, Mustroph A. Localization of sucrose synthase in wheat roots: increased in situ activity of sucrose synthase correlates with cell wall thickening by cellulose deposition under hypoxia. Planta 217: 252-260 (2003).

Alcantara J, Bird DA, Franceschi VR, Facchini PJ. Sanguinarine biosynthesis is associated with the endoplasmic reticulum in cultured opium poppy cells after elicitor treatment. Plant Physiol. 138: 173-183 (2005).

Alfonso M, Collados R, Yruela I, Picorel R. Photoinhibition and recovery in a herbicide-resistant mutant from Glycine max (L.) Merr. cell cultures deficient in fatty acid unsaturation. Planta 219: 428-439 (2004).

Alkharouf NW, Klink VP, Chouikha IB, Beard HS, Macdonald MH, Meyer S, Knap HT, Khan R, Matthews BF. Timecourse microarray analyses reveal global changes in gene expression of susceptible Glycine max (soybean) roots during infection by Heterodera glycines (soybean cyst nematode). Planta 224: 838-852 (2006).

Allen DK, Ohlrogge JB, Shachar-Hill Y. The role of light in soybean seed filling metabolism. Plant J. 58: 220-234 (2009).

Alonso AP, Raymond P, Hernould M, Rondeau-Mouro C, de Graaf A, Chourey P, Lahaye M, Shachar-Hill Y, Rolin D, Dieuaide-Noubhani M. A metabolic flux analysis to study the role of sucrose synthase in the regulation of the carbon partitioning in central metabolism in maize root tips. Metab. Eng. 9: 419-432 (2007).

Alonso AP, Raymond P, Rolin D, Dieuaide-Noubhani M. Substrate cycles in the central metabolism of maize root tips under hypoxia. Phytochemistry 68: 2222-2231 (2007).

Altmann T, Kossmann J. Photosynthesis and primary metabolism. Trends Plant Sci. 6: 93-94 (2001).

Amiard V, Mueh KE, Demmig-Adams B, Ebbert V, Turgeon R, Adams WW 3rd. Anatomical and photosynthetic acclimation to the light environment in species with differing mechanisms of phloem loading. Proc. Natl. Acad. Sci. U.S.A. 102: 12968-12973 (2005).

Amthor JS. Efficiency of lignin biosynthesis: a quantitative analysis. Ann. Bot. (Lond.) 91: 673-695 (2003).

Andersson-Gunneras S, Mellerowicz EJ, Love J, Segerman B, Ohmiya Y, Coutinho PM, Nilsson P, Henrissat B, Moritz T, Sundberg B. Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. Plant J. 45: 144-165 (2006).

Anterola AM, Jeon JH, Davin LB, Lewis NG. Transcriptional control of monolignol biosynthesis in Pinus taeda - Factors affecting monolignol ratios and carbon allocation in phenylpropanoid metabolism. J. Biol. Chem. 277: 18272-18280 (2002).

Asano T, Kunieda N, Omura Y, Ibe H, Kawasaki T, Takano M, Sato M, Furuhashi H, Mujin T, Takaiwa F, Wu Cy CY, Tada Y, Satozawa T, Sakamoto M, Shimada H. Rice SPK, a calmodulin-like domain protein kinase, is required for storage product accumulation during seed development: phosphorylation of sucrose synthase is a possible factor. Plant Cell 14: 619-628 (2002).

Asega AF, Nascimento JR, Schroeven L, Ende WV, Carvalho MA. Cloning, characterization and functional analysis of a 1-FEH cDNA from Vernonia herbacea (Vell.) Rusby. Plant Cell Physiol. 49: 1185-1195 (2008).

Babb VM, Haigler CH. Sucrose phosphate synthase activity rises in correlation with high-rate cellulose synthesis in three heterotrophic systems. Plant Physiol. 127: 1234-1242 (2001).

Baena-Gonzalez E, Rolland F, Thevelein JM, Sheen J. A central integrator of transcription networks in plant stress and energy signalling. Nature 448: 938-942 (2007).

Bagnall DJ, King RW. Phytochrome, photosynthesis and flowering of Arabidopsis thaliana: photophysiological studies using mutants and transgenic lines. Aust. J. Plant Physiol. 28: 401-408 (2001).

Bao X, Ohlrogge J. Supply of fatty acid is one limiting factor in the accumulation of triacylglycerol in developing embryos. Plant Physiol. 120: 1057-1062 (1999).

Barnes SA, Knight JS, Gray JC. Alteration of the amount of the chloroplast phosphate translocator in transgenic tobacco affects the distribution of assimilate between starch and sugar. Plant Physiol. 106: 1123-1129 (1994).

Baroja-Fernandez E, Munoz FJ, Akazawa T, Pozueta-Romero J. Reappraisal of the currently prevailing model of starch biosynthesis in photosynthetic tissues: a proposal involving the cytosolic production of ADP-glucose by sucrose synthase and occurrence of cyclic turnover of starch in the chloroplast. Plant Cell Physiol. 42: 1311-1320 (2001).

Baroja-Fernandez E, Munoz FJ, Akazawa T, Pozueta-Romero J. Reappraisal of the currently prevailing model of starch biosynthesis in photosynthetic tissues: a proposal involving the cytosolic production of ADP-glucose by sucrose synthase and occurrence of cyclic turnover of starch in the chloroplast. Plant Cell Physiol. 42: 1311-1320 (2001).

Barra L, Pica N, Gouffi K, Walker GC, Blanco C, Trautwetter A. Glucose 6-phosphate dehydrogenase is required for sucrose and trehalose to be efficient osmoprotectants in Sinorhizobium meliloti. FEMS Microbiol. Lett. 229: 183-188 (2003).

Basham JC, Chabrerie A, Kempson SA. Hypertonic activation of the renal betaine/GABA transporter is microtubule dependent. Kidney Int. 59: 2182-2191 (2001).

Battistelli A, Adcock MD, Leegood RC. The relationship between the activation state of sucrose-phosphate synthase and the rate of CO2 assimilation in spinach leaves. Planta 183: 620-622 (1991).

Baxter CJ, Carrari F, Bauke A, Overy S, Hill SA, Quick PW, Fernie AR, Sweetlove LJ. Fruit carbohydrate metabolism in an introgression line of tomato with increased fruit soluble solids. Plant Cell Physiol. 46: 425-437 (2005).

Baxter CJ, Foyer CH, Turner J, Rolfe SA, Quick WP. Elevated sucrose-phosphate synthase activity in transgenic tobacco sustains photosynthesis in older leaves and alters development. J. Exp. Bot. 54: 1813-1820 (2003).

Berger S, Papadopoulos M, Schreiber U, Kaiser W, Roitsch T. Complex regulation of gene expression, photosynthesis and sugar levels by pathogen infection in tomato. Physiol. Plant. 122: 419-428 (2004).

Bertin N, Causse M, Brunel B, Tricon D, Genard M. Identification of growth processes involved in QTLs for tomato fruit size and composition. J. Exp. Bot. 60: 237-248 (2009).

Blanc G, Lardet L, Martin A, Jacob JL, Carron MP. Differential carbohydrate metabolism conducts morphogenesis in embryogenic callus of Hevea brasiliensis (Mull. Arg.). J. Exp. Bot. 53: 1453-1462 (2002).

Blazquez MA, Green R, Nilsson O, Sussman MR, Weigel D. Gibberellins promote flowering of Arabidopsis by activating the LEAFY promoter. Plant Cell 10: 791-800 (1998).

Blumenrother MC, Low M, Matyssek R, Osswald W. Flux-based response of sucrose and starch in leaves of adult beech trees (Fagus sylvatica L.) under chronic free-air O3 fumigation. Plant Biol. (Stuttg). 9: 207-214 (2007).

Bologa KL, Fernie AR, Leisse A, Ehlers Loureiro M, Geigenberger P. A bypass of sucrose synthase leads to low internal oxygen and impaired metabolic performance in growing potato tubers. Plant Physiol. 132: 2058-2072 (2003).

Borisjuk L, Rolletschek H, Wobus U, Weber H. Differentiation of legume cotyledons as related to metabolic gradients and assimilate transport into seeds. J. Exp. Bot. 54: 503-512 (2003).

Bornke F, Hajirezaei M, Heineke D, Melzer M, Herbers K, Sonnewald U. High-level production of the non-cariogenic sucrose isomer palatinose in transgenic tobacco plants strongly impairs development. Planta 214: 356-364 (2002).

Boyer JS, Westgate ME. Grain yields with limited water. J. Exp. Bot. 55: 2385-2394 (2004).

Buckeridge MS, Vergara CE, Carpita NC. The mechanism of synthesis of a mixed-linkage (1-->3),(1-->4)beta-D-glucan in maize. Evidence for multiple sites of glucosyl transfer in the synthase complex. Plant Physiol. 120: 1105-1116 (1999).

Burkle L, Hibberd JM, Quick WP, Kuhn C, Hirner B, Frommer WB. The H+-sucrose cotransporter NtSUT1 is essential for sugar export from tobacco leaves. Plant Physiol. 118: 59-68 (1998).

Cairns AJ, Gallagher JA. Absence of turnover and futile cycling of sucrose in leaves of Lolium temulentum L.: implications for metabolic compartmentation. Planta 219: 836-846 (2004).

Castleden CK, Aoki N, Gillespie VJ, MacRae EA, Quick WP, Buchner P, Foyer CH, Furbank RT, Lunn JE. Evolution and function of the sucrose-phosphate synthase gene families in wheat and other grasses. Plant Physiol. 135: 1753-1764 (2004).

Casu RE, Dimmock CM, Chapman SC, Grof CP, McIntyre CL, Bonnett GD, Manners JM. Identification of differentially expressed transcripts from maturing stem of sugarcane by in silico analysis of stem expressed sequence tags and gene expression profiling. Plant Mol. Biol. 54: 503-517 (2004).

Casu RE, Grof CP, Rae AL, McIntyre CL, Dimmock CM, Manners JM. Identification of a novel sugar transporter homologue strongly expressed in maturing stem vascular tissues of sugarcane by expressed sequence tag and microarray analysis. Plant Mol. Biol. 52: 371-386 (2003).

Cernac A, Andre C, Hoffmann-Benning S, Benning C. WRI1 is required for seed germination and seedling establishment. Plant Physiol. 141: 745-757 (2006).

Cernac A, Benning C. WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis. Plant J. 40: 575-585 (2004).

Chambers ST, Kunin CM. Isolation of glycine betaine and proline betaine from human urine. Assessment of their role as osmoprotective agents for bacteria and the kidney. J. Clin. Invest. 79: 731-737 (1987).

Champigny M-L, Foyer C. Nitrate activation of cytosolic protein kinases diverts photosynthetic carbon from sucrose to amino acid biosynthesis. Plant Physiol. 100: 7-12 (1992).

Chen LM, Li KZ, Miwa T, Izui K. Overexpression of a cyanobacterial phosphoenolpyruvate carboxylase with diminished sensitivity to feedback inhibition in Arabidopsis changes amino acid metabolism. Planta 219: 440-449 (2004).

Chen LS, Qi YP, Smith BR, Liu XH. Aluminum-induced decrease in CO2 assimilation in citrus seedlings is unaccompanied by decreased activities of key enzymes involved in CO2 assimilation. Tree Physiol. 25: 317-324 (2005).

Chen S, Hajirezaei M, Bornke F. Differential expression of sucrose-phosphate synthase isoenzymes in tobacco reflects their functional specialization during dark-governed starch mobilization in source leaves. Plant Physiol. 139: 1163-1174 (2005).

Chen S, Hajirezaei M, Peisker M, Tschiersch H, Sonnewald U, Bornke F. Decreased sucrose-6-phosphate phosphatase level in transgenic tobacco inhibits photosynthesis, alters carbohydrate partitioning, and reduces growth. Planta 221: 479-492 (2005).

Chen Y, Ji F, Xie H, Liang J, Zhang J. The regulator of G-protein signaling proteins involved in sugar and abscisic acid signaling in Arabidopsis seed germination. Plant Physiol. 140: 302-310 (2006).

Cheng CL, Acedo GN, Cristinsin M, Conkling MA. Sucrose mimics the light induction of Arabidopsis nitrate reductase gene transcription. Proc. Natl. Acad. Sci. U.S.A. 89: 1861-1864 (1992).

Cheng L, Zhou R, Reidel EJ, Sharkey TD, Dandekar AM. Antisense inhibition of sorbitol synthesis leads to up-regulation of starch synthesis without altering CO2 assimilation in apple leaves. Planta 220: 767-776 (2005).

Chia T, Thorneycroft D, Chapple A, Messerli G, Chen J, Zeeman SC, Smith SM, Smith AM. A cytosolic glucosyltransferase is required for conversion of starch to sucrose in Arabidopsis leaves at night. Plant J. 37: 853-863 (2004).

Chia TY, Pike MJ, Rawsthorne S. Storage oil breakdown during embryo development of Brassica napus (L.). J. Exp. Bot. 56: 1285-1296 (2005).

Chiang YJ, Stushnoff C, McSay AE. Overexpression of mannitol-1-phosphate dehydrogenase increases mannitol accumulation and adds protection against chilling injury in petunia. J. Am. Soc. Hortic. Sci. 130: 605-610 (2005).

Chong BF, Bonnett GD, Glassop D, O'Shea MG, Brumbley SM. Growth and metabolism in sugarcane are altered by the creation of a new hexose-phosphate sink. Plant Biotechnol. J. 5: 240-253 (2007).

Ciereszko I, Johansson H, Hurry V, Kleczkowski LA. Phosphate status affects the gene expression, protein content and enzymatic activity of UDP-glucose pyrophosphorylase in wild-type and pho mutants of Arabidopsis. Planta 212: 598-605 (2001).

Ciereszko I, Johansson H, Kleczkowski LA. Sucrose and light regulation of a cold-inducible UDP-glucose pyrophosphorylase gene via a hexokinase-independent and abscisic acid-insensitive pathway in Arabidopsis. Biochem. J. 354: 67-72 (2001).

Clarke BR, Denyer K, Jenner CF, Smith AM. The relationship between the rate of starch synthesis, the adenosine 5'-diphosphoglucose concentration and the amylose content of starch in developing pea embryos. Planta 209: 324-329 (1999).

Close TJ, Lammers PJ. An osmotic stress protein of cyanobacteria is immunologically related to plant dehydrins. Plant Physiol. 101: 773-779 (1993).

Colebatch G, Kloska S, Trevaskis B, Freund S, Altmann T, Udvardi MK. Novel aspects of symbiotic nitrogen fixation uncovered by transcript profiling with cDNA arrays. Mol. Plant Microbe Interact. 15: 411-420 (2002).

Conde C, Agasse A, Silva P, Lemoine R, Delrot S, Tavares R, Geros H. OeMST2 encodes a monosaccharide transporter expressed throughout olive fruit maturation. Plant Cell Physiol. 48: 1299-1308 (2007).

Cooper K, Farrant JM. Recovery of the resurrection plant Craterostigma wilmsii from desiccation: protection versus repair. J. Exp. Bot. 53: 1805-1813 (2002).

Cordoba E, Shishkova S, Vance CP, Hernandez G. Antisense inhibition of NADH glutamate synthase impairs carbon/nitrogen assimilation in nodules of alfalfa (Medicago sativa L.). Plant J. 33: 1037-1049 (2003).

Coruzzi GM, Zhou L. Carbon and nitrogen sensing and signaling in plants: emerging ‘matrix effects’. Curr. Opin. Plant Biol. 4: 247-253 (2001).

Couee I, Sulmon C, Gouesbet G, El Amrani A. Involvement of soluble sugars in reactive oxygen species balance and responses to oxidative stress in plants. J. Exp. Bot. 57: 449-459 (2006).

Cruz C, Lips H, Martins-Loucao MA. Nitrogen use efficiency by a slow-growing species as affected by CO2 levels, root temperature, N source and availability. J. Plant Physiol. 160: 1421-1428 (2003).

Cumino A, Ekeroth C, Salerno GL. Sucrose-phosphate phosphatase from Anabaena sp. strain PCC 7120: isolation of the protein and gene revealed significant structural differences from the higher-plant enzyme. Planta 214: 250-256 (2001).

Cumming CM, Rizkallah HD, McKendrick KA, Abdel-Massih RM, Baydoun EA, Brett CT. Biosynthesis and cell-wall deposition of a pectin-xyloglucan complex in pea. Planta 222: 546-555 (2005).

Curatti L, Giarrocco LE, Cumino AC, Salerno GL. Sucrose synthase is involved in the conversion of sucrose to polysaccharides in filamentous nitrogen-fixing cyanobacteria. Planta 228: 617-625 (2008).

Dai N, Petreikov M, Portnoy V, Katzir N, Pharr DM, Schaffer AA. Cloning and expression analysis of a UDP-galactose/glucose pyrophosphorylase from melon fruit provides evidence for the major metabolic pathway of galactose metabolism in raffinose oligosaccharide metabolizing plants. Plant Physiol. 142: 294-304 (2006).

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Davies C, Robinson SP. Sugar accumulation in grape berries. Cloning of two putative vacuolar invertase cDNAs and their expression in grapevine tissues. Plant Physiol. 111: 275-283 (1996).

de Graaf AA, Striegel K, Wittig RM, Laufer B, Schmitz G, Wiechert W, Sprenger GA, Sahm H. Metabolic state of Zymomonas mobilis in glucose-, fructose-, and xylose-fed continuous cultures as analysed by 13C- and 31P-NMR spectroscopy. Arch. Microbiol. 171: 371-385 (1999).

De Roover J, Vandenbranden, Van Laere A, Van den Ende W. Drought induces fructan synthesis and 1-SST (sucrose:sucrose fructosyltransferase) in roots and leaves of chicory seedlings. Planta 210: 808-814 (2000).

de Sousa SM, Paniago MD, Arruda P, Yunes JA. Sugar levels modulate sorbitol dehydrogenase expression in maize. Plant Mol. Biol. 68: 203-213 (2008).

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Dejardin A, Rochat C, Maugenest S, Boutin JP. Purification, characterization and physiological role of sucrose synthase in the pea seed coat (Pisum sativum L.). Planta 201: 128-137 (1997).

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Fernie AR, Roessner U, Geigenberger P. The sucrose analog palatinose leads to a stimulation of sucrose degradation and starch synthesis when supplied to discs of growing potato tubers. Plant Physiol. 125: 1967-1977 (2001).

Fernie AR, Roessner U, Trethewey RN, Willmitzer L. The contribution of plastidial phosphoglucomutase to the control of starch synthesis within the potato tuber. Planta 213: 418-426 (2001).

Fernie AR, Roscher A, Ratcliffe RG, Kruger NJ. Fructose 2,6-bisphosphate activates pyrophosphate: fructose-6-phosphate 1-phosphotransferase and increases triose phosphate to hexose phosphate cycling in heterotrophic cells. Planta 212: 250-263 (2001).

Fernie AR, Tauberger E, Lytovchenko A, Roessner U, Willmitzer L, Trethewey RN. Antisense repression of cytosolic phosphoglucomutase in potato (Solanum tuberosum) results in severe growth retardation, reduction in tuber number and altered carbon metabolism. Planta 214: 510-520 (2002).

Fernie AR, Tiessen A, Stitt M, Willmitzer L, Geigenberger P. Altered metabolic fluxes result from shifts in metabolite levels in sucrose phosphorylase-expressing potato tubers. Plant Cell Environ. 25: 1219-1232 (2002).

Ferrario-Mery S, Hodges M, Hirel B, Foyer CH. Photorespiration-dependent increases in phosphoenolpyruvate carboxylase, isocitrate dehydrogenase and glutamate dehydrogenase in transformed tobacco plants deficient in ferredoxin-dependent glutamine-alpha-ketoglutarate aminotransferase. Planta 214: 877-886 (2002).

Ferrario-Mery S, Thibaud MC, Betsche T, Valadier MH, Foyer CH. Modulation of carbon and nitrogen metabolism, and of nitrate reductase, in untransformed and transformed Nicotiana plumbaginifolia during CO2 enrichment of plants grown in pots and in hydroponic culture. Planta 202: 510-521 (1997).

Ferrario-Mery S, Valadier MH, Foyer CH. Overexpression of nitrate reductase in tobacco delays drought-induced decreases in nitrate reductase activity and mRNA. Plant Physiol. 117: 293-302 (1998).

Fieulaine S, Lunn JE, Borel F, Ferrer JL. The structure of a cyanobacterial sucrose-phosphatase reveals the sugar tongs that release free sucrose in the cell. Plant Cell 17: 2049-2058 (2005).

Fieuw S, Muller-Rober B, Galvez S, Willmitzer L. Cloning and expression analysis of the cytosolic NADP(+)-dependent isocitrate dehydrogenase from potato. Implications for nitrogen metabolism. Plant Physiol. 107: 905-913 (1995).

Florchinger M, Zimmermann M, Traub M, Neuhaus HE, Mohlmann T. Adenosine stimulates anabolic metabolism in developing castor bean (Ricinus communis L.) cotyledons. Planta 223: 340-348 (2006).

Footitt S, Dietrich D, Fait A, Fernie AR, Holdsworth MJ, Baker A, Theodoulou FL. The COMATOSE ABC transporter is required for full fertility in Arabidopsis. Plant Physiol. 144: 1467-1480 (2007).

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