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HORT640 - Metabolic Plant Physiology
References, pyruvate phosphate dikinase
Agarie S, Kai M, Takatsuji H, Ueno O. Expression of C3 and C4 photosynthetic characteristics in the amphibious plant Eleocharis vivipara: structure and analysis of the expression of isogenes for pyruvate, orthophosphate dikinase. Plant Mol. Biol. 34: 363-369 (1997).
Beyel V, Bruggemann W. Differential inhibition of photosynthesis during pre-flowering drought stress in Sorghum bicolor genotypes with different senescence traits. Physiol. Plant. 124: 249-259 (2005).
Budde RJ, Holbrook GP, Chollet R. Studies on the dark/light regulation of maize leaf pyruvate, orthophosphate dikinase by reversible phosphorylation. Arch. Biochem. Biophys. 242: 283-290 (1985).
Chapman KSR, Hatch MD. Regulation of C4 photosynthesis: mechanism of activation and inactivation of extracted pyruvate, inorganic-phosphate dikinase in relation to dark-light regulation. Arch. Biochem. Biophys. 210: 82-89 (1981).
Chastain CJ, Fries JP, Vogel JA, Randklev CL, Vossen AP, Dittmer SK, Watkins EE, Fiedler LJ, Wacker SA, Meinhover KC, Sarath G, Chollet R. Pyruvate, orthophosphate dikinase in leaves and chloroplasts of C3 plants undergoes light-/dark-induced reversible phosphorylation. Plant Physiol. 128: 1368-1378 (2002).
Chastain CJ, Heck JW, Colquhoun TA, Voge DG, Gu XY. Posttranslational regulation of pyruvate, orthophosphate dikinase in developing rice (Oryza sativa) seeds. Planta 224: 924-934 (2006).
Chastain CJ, Xu W, Parsley K, Sarath G, Hibberd JM, Chollet R. The pyruvate, orthophosphate dikinase regulatory proteins of Arabidopsis possess a novel, unprecedented Ser/Thr protein kinase primary structure. Plant J. 53: 854-863 (2008).
Crafts-Brandner SJ, Salvucci ME. Sensitivity of photosynthesis in a C4 plant, maize, to heat stress. Plant Physiol. 129: 1773-1780 (2002).
Dever LV, Blackwell RD, Fullwood NJ, Lacuesta M, Leegood RC, Onek LA, Pearson M, Lea PJ. The isolation and characterization of mutants of the C4 photosynthetic pathway. J. Exp. Bot. 46: 1363-1376 (1995).
Devi MT, Raghavendra AS. Partial reduction in activities of photorespiratory enzymes in C3-C4 intermediates of Alternanthera and Parthenium. J. Exp. Bot. 44: 779-784 (1993).
Famiani F, Cultrera NG, Battistelli A, Casulli V, Proietti P, Standardi A, Chen ZH, Leegood RC, Walker RP. Phosphoenolpyruvate carboxykinase and its potential role in the catabolism of organic acids in the flesh of soft fruit during ripening. J. Exp. Bot. 56: 2959-2969 (2005).
Fisslthaler B, Meyer G, Bohnert HJ, Schmitt JM. Age-dependent induction of pyruvate, orthophosphate dikinase in Mesembryanthemum crystallinum L. Planta 196: 492-500 (1995).
Fukayama H, Tsuchida H, Agarie S, Nomura M, Onodera H, Ono K, Lee BH, Hirose S, Toki S, Ku MS, Makino A, Matsuoka M, Miyao M. Significant accumulation of C4-specific pyruvate, orthophosphate dikinase in a C3 plant, rice. Plant Physiol. 127: 1136-1146 (2001).
Gallusci P, Varotto S, Matsuoko M, Maddaloni M, Thompson RD. Regulation of cytosolic pyruvate, orthophosphate dikinase expression in developing maize endosperm. Plant Mol. Biol. 31: 45-55 (1996).
Glackin CA, Grula JW. Organ-specific transcripts of different size and abundance derive from the same pyruvate, orthophosphate dikinase gene in maize. Proc. Natl. Acad. Sci. U.S.A. 87: 3004-3008 (1990).
Hausler RE, Baur B, Scharte J, Teichmann T, Eicks M, Fischer KL, Flugge UI, Schubert S, Weber A, Fischer K. Plastidic metabolite transporters and their physiological functions in the inducible Crassulacean acid metabolism plant Mesembryanthemum crystallinum. Plant J. 24: 285-296 (2000).
Hennen-Bierwagen TA, Lin Q, Grimaud F, Planchot V, Keeling PL, James MG, Myers AM. Proteins from multiple metabolic pathways associate with starch biosynthetic enzymes in high molecular weight complexes: a model for regulation of carbon allocation in maize amyloplasts. Plant Physiol. 149: 1541-1559 (2009).
Huang S, Colmer TD, Millar AH. Does anoxia tolerance involve altering the energy currency towards PPi? Trends Plant Sci. 13: 221-227 (2008).
Imaizumi N, Ku MS, Ishihara K, Samejima M, Kaneko S, Matsuoka M. Characterization of the gene for pyruvate, orthophosphate dikinase from rice, a C3 plant, and a comparison of structure and expression between C3 and C4 genes for this protein. Plant Mol. Biol. 34: 701-716 (1997).
Jiao D, Huang X, Li X, Chi W, Kuang T, Zhang Q, Ku MS, Cho D. Photosynthetic characteristics and tolerance to photo-oxidation of transgenic rice expressing C(4) photosynthesis enzymes. Photosynth. Res. 72: 85-93 (2002).
Jiao JA, Echevarria C, Vidal J, Chollet R. Protein turnover as a component in the light dark regulation of phosphoenolpyruvate carboxylase protein serine kinase activity in C4 plants. Proc. Natl. Acad. Sci. U.S.A. 88: 2712-2715 (1991).
Kang HG, Park S, Matsuoka M, An G. White-core endosperm floury endosperm-4 in rice is generated by knockout mutations in the C-type pyruvate orthophosphate dikinase gene (OsPPDKB). Plant J. 42: 901-911 (2005).
Leegood RC. The regulation of C4 photosynthesis. Adv. Bot. Res. 26: 251-316 (1997).
Lin JF, Wu SH. Molecular events in senescing Arabidopsis leaves. Plant J. 39: 612-628 (2004).
MacKintosh C, Coggins J, Cohen P. Plant protein phosphatases: subcellular distribution, detection of protein phosphatase 2C and identification of protein phosphatase 2A as the major quinate dehydrogenase phosphatase. Biochem. J. 273: 733-738 (1991).
Manicacci D, Camus-Kulandaivelu L, Fourmann M, Arar C, Barrault S, Rousselet A, Feminias N, Consoli L, Frances L, Mechin V, Murigneux A, Prioul JL, Charcosset A, Damerval C. Epistatic interactions between Opaque2 transcriptional activator and its target gene CyPPDK1 control kernel trait variation in maize. Plant Physiol. 150: 506-520 (2009).
Matsuoka M. Structure, genetic mapping, and expression of the gene for pyruvate, orthophosphate dikinase from maize. J. Biol. Chem. 265: 16772-16777 (1990).
Matsuoka M. The gene for pyruvate, orthophosphate dikinase in C4 plants: structure, regulation and evolution. Plant Cell Physiol. 36: 937-943 (1995).
Moons A, Valcke R, Van Montagu M. Low-oxygen stress and water deficit induce cytosolic pyruvate orthophosphate dikinase (PPDK) expression in roots of rice, a C3 plant. Plant J. 15: 89-98 (1998).
Moreno-Sanchez R, Encalada R, Marin-Hernandez A, Saavedra E. Experimental validation of metabolic pathway modeling. An illustration with glycotic segments from Entamoeba histolytica. FEBS J. 275: 3454-3469 (2008).
Naidu SL, Long SP. Potential mechanisms of low-temperature tolerance of C4 photosynthesis in Miscanthus x giganteus: an in vivo analysis. Planta 220: 145-155 (2004).
Naidu SL, Moose SP, AL-Shoaibi AK, Raines CA, Long SP. Cold tolerance of C4 photosynthesis in Miscanthus x giganteus: adaptation in amounts and sequence of C4 photosynthetic enzymes. Plant Physiol. 132: 1688-1697 (2003).
Niersbach M, Kreuzaler F, Geerse RH, Postma PW, Hirsch HJ. Cloning and nucleotide sequence of the Escherichia coli K-12 ppsA gene, encoding PEP synthase. Mol. Gen. Genet. 231: 332-336 (1992).
Parsley K, Hibberd JM. The Arabidopsis PPDK gene is transcribed from two promoters to produce differentially expressed transcripts responsible for cytosolic and plastidic proteins. Plant Mol. Biol. 62: 339-349 (2006).
Podesta FE, Iglesias AA, Andreo CS. Oligomeric enzymes in the C4 pathway of photosynthesis. Photosynth. Res. 26: 161-170 (1990).
Qu le Q, Takaiwa F. Evaluation of tissue specificity and expression strength of rice seed component gene promoters in transgenic rice. Plant Biotechnol. J. 2: 113-125 (2004).
Rippmann JF, Michalowski CB, Nelson DE, Bohnert HJ. Induction of a ribosome-inactivating protein upon environmental stress. Plant Mol. Biol. 35: 701-709 (1997).
Rosche E, Chitty J, Westhoff P, Taylor WC. Analysis of promoter activity for the gene encoding pyruvate orthophosphate dikinase in stably transformed C4 Flaveria species. Plant Physiol. 117: 821-829 (1998).
Salahas G, Manetas Y, Gavalas NA. Effects of glycerol on the in vitro stability and regulatory activation/inactivation of pyruvate, orthophosphate dikinase of Zea mays L. Photosynth. Res. 26: 9-17 (1990).
Salahas G, Manetas Y, Gavalas NA. Assaying for pyruvate, orthophosphate dikinase activity: necessary precautions with phosphoenolpyruvate carboxylase as coupling enzyme. Photosynth. Res. 24: 183-188 (1990).
Sheen J. Molecular mechanisms underlying the differential expression of maize pyruvate, orthophosphate dikinase genes. Plant Cell 3: 225-245 (1991).
Shu G, Pontieri V, Dengler NG, Mets LJ. Light induction of cell type differentiation and cell-type-specific gene expression in cotyledons of a C(4) plant, Flaveria trinervia. Plant Physiol. 121: 731-741 (1999).
Simon JP, Hatch MD. Temperature effects on the activation and inactivation of pyruvate, Pi dikinase in two populations of the C-4 weed Echinochloa crus-galli (barnyard grass) from sites of contrasting climates. Aust. J. Plant Physiol. 21: 463-473 (1994).
Suzuki S, Murai N, Burnell JN, Arai M. Changes in photosynthetic carbon flow in transgenic rice plants that express C4-type phosphoenolpyruvate carboxykinase from Urochloa panicoides. Plant Physiol. 124: 163-172 (2000).
Taniguchi M, Izawa K, Ku MS, Lin JH, Saito H, Ishida Y, Ohta S, Komari T, Matsuoka M, Sugiyama T. The promoter for the maize C4 pyruvate, orthophosphate dikinase gene directs cell- and tissue-specific transcription in transgenic maize plants. Plant Cell Physiol. 41: 42-48 (2000).
Taniguchi Y, Ohkawa H, Masumoto C, Fukuda T, Tamai T, Lee K, Sudoh S, Tsuchida H, Sasaki H, Fukayama H, Miyao M. Overproduction of C4 photosynthetic enzymes in transgenic rice plants: an approach to introduce the C4-like photosynthetic pathway into rice. J. Exp. Bot. 59: 1799-1809 (2008).
Tazoe Y, Hanba YT, Furumoto T, Noguchi K, Terashima I. Relationships between quantum yield for CO2 assimilation, activity of key enzymes and CO2 leakiness in Amaranthus cruentus, a C4 dicot, grown in high or low light. Plant Cell Physiol. 49: 19-29 (2008).
Trevanion SJ, Ashton AR, Furbank RT. Antisense RNA inhibition of pyruvate, orthophosphate dikinase and NADP malate dehydrogenase in the C-4 plant Flaveria bidentis: analysis of plants with a mosaic phenotype. Aust. J. Plant Physiol. 26: 537-547 (1999).
Ueno O. Induction of Kranz anatomy and C4-like biochemical characteristics in a submerged amphibious plant by abscisic acid. Plant Cell 10: 571-584 (1998).
Voll L, Hausler RE, Hecker R, Weber A, Weissenbock G, Fiene G, Waffenschmidt S, Flugge UI. The phenotype of the Arabidopsis cue1 mutant is not simply caused by a general restriction of the shikimate pathway. Plant J. 36: 301-317 (2003).
Wang JL, Long JJ, Hotchkiss T, Berry JO. C4 photosynthetic gene expression in light- and dark-grown amaranth cotyledons. Plant Physiol. 102: 1085-1093 (1993).
Yamakawa H, Hirose T, Kuroda M, Yamaguchi T. Comprehensive expression profiling of rice grain filling-related genes under high temperature using DNA microarray. Plant Physiol. 144: 258-277 (2007).
Number of references = 52
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