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N Use By Plants
Nitrate Assimilation
Ammonia Assimilation
Glu, Gln, Asn, Gly, Ser
Aminotransferases
Asp, Ala, GABA
Val, Leu, Ileu, Thr, Lys
Pro, Arg, Orn
Polyamines
Non-protein AAs
Alkaloids
Sulfate Assimilation
Cys, Met, AdoMet, ACC
His, Phe, Tyr, Tryp
Secondary Products
Onium Compounds
Enzymes
Methods
Simulation
References
HORT640 - Metabolic Plant Physiology

References, plastocyanin

Abdel-Ghany SE. Contribution of plastocyanin isoforms to photosynthesis and copper homeostasis in Arabidopsis thaliana grown at different copper regimes. Planta 229: 767-779 (2009).

Abdel-Ghany SE, Muller-Moule P, Niyogi KK, Pilon M, Shikanai T. Two P-type ATPases are required for copper delivery in Arabidopsis thaliana chloroplasts. Plant Cell 17: 1233-1251 (2005).

Brown NJ, Sullivan JA, Gray JC. Light and plastid signals regulate the expression of the pea plastocyanin gene through a common region at the 5' end of the coding region. Plant J. 43: 541-552 (2005).

Chassin Y, Kapri-Pardes E, Sinvany G, Arad T, Adam Z. Expression and characterization of the thylakoid lumen protease DegP1 from Arabidopsis. Plant Physiol. 130: 857-864 (2002).

Chitnis PR. Photosystem I: function and physiology. Annu. Rev. Plant Physiol. Plant Mol. Biol. 52: 593-626 (2001).

Chua YL, Watson LA, Gray JC. The transcriptional enhancer of the pea plastocyanin gene associates with the nuclear matrix and regulates gene expression through histone acetylation. Plant Cell 15: 1468-1479 (2003).

Clarke AK, Campbell D. Inactivation of the petE gene for plastocyanin lowers photosynthetic capacity and exacerbates chilling-induced photoinhibition in the cyanobacterium Synechococcus. Plant Physiol. 112: 1551-1561 (1996).

Cruz JA, Salbilla BA, Kanazawa A, Kramer DM. Inhibition of plastocyanin to P(700)(+) electron transfer in Chlamydomonas reinhardtii by hyperosmotic stress. Plant Physiol. 127: 1167-1179 (2001).

Gattolin S, Alandete-Saez M, Elliott K, Gonzalez-Carranza Z, Naomab E, Powell C, Roberts JA. Spatial and temporal expression of the response regulators ARR22 and ARR24 in Arabidopsis thaliana. J. Exp. Bot. 57: 4225-4233 (2006).

Gelis I, Katsaros N, Luchinat C, Piccioli M, Poggi L. A simple protocol to study blue copper proteins by NMR. Eur. J. Biochem. 270: 600-609 (2003).

Ghosh S, Xie X, Dey A, Sun Y, Scholes CP, Solomon EI. Thermodynamic equilibrium between blue and green copper sites and the role of the protein in controlling function. Proc. Natl. Acad. Sci. U.S.A. 106: 4969-4974 (2009).

Haldrup A, Naver H, Scheller HV. The interaction between plastocyanin and photosystem I is inefficient in transgenic Arabidopsis plants lacking the PSI-N subunit of photosystem I. Plant J. 17: 689-698 (1999).

Herbik A, Giritch A, Horstmann C, Becker R, Balzer HJ, Baumlein H, Stephan UW. Iron and copper nutrition-dependent changes in protein expression in a tomato wild type and the nicotianamine-free mutant chloronerva. Plant Physiol. 111: 533-540 (1996).

Hibino T, Kaku N, Yoshikawa H, Takabe T, Takabe T. Molecular characterization of DnaK from the halotolerant cyanobacterium Aphanothece halophytica for ATPase, protein folding, and copper binding under various salinity conditions. Plant Mol. Biol. 40: 409-418 (1999).

Hope AB. Electron transfers amongst cytochrome f, plastocyanin and photosystem I: kinetics and mechanisms. Biochim. Biophys. Acta 1456: 5-26 (2000).

Howe CJ, Schlarb-Ridley BG, Wastl J, Purton S, Bendall DS. The novel cytochrome c6 of chloroplasts: a case of evolutionary bricolage? J. Exp. Bot. 57: 13-22 (2006).

Khan JA, Wang Q, Sjolund RD, Schulz A, Thompson GA. An early nodulin-like protein accumulates in the sieve element plasma membrane of Arabidopsis. Plant Physiol. 143: 1576-1589 (2007).

Kimata Y, Theil EC. Posttranscriptional regulation of ferritin during nodule development in soybean. Plant Physiol. 104: 263-270 (1994).

Kindle KL. Amino-terminal and hydrophobic regions of the Chlamydomonas reinhardtii plastocyanin transit peptide are required for efficient protein accumulation in vivo. Plant Mol. Biol. 38: 365-377 (1998).

Kovacheva S, Bedard J, Wardle A, Patel R, Jarvis P. Further in vivo studies on the role of the molecular chaperone, Hsp93, in plastid protein import. Plant J. 50: 364-379 (2007).

Lee BH, Hibino T, Jo J, Viale AM, Takabe T. Isolation and characterization of a dnaK genomic locus in a halotolerant cyanobacterium Aphanothece halophytica. Plant Mol. Biol. 35: 763-775 (1997).

Lindell D, Sullivan MB, Johnson ZI, Tolonen AC, Rohwer F, Chisholm SW. Transfer of photosynthesis genes to and from Prochlorococcus viruses. Proc. Natl. Acad. Sci. U.S.A. 101: 11013-11018 (2004).

Manna P, Vermaas W. Lumenal proteins involved in respiratory electron transport in the cyanobacterium Synechocystis sp. PCC6803. Plant Mol. Biol. 35: 407-416 (1997).

Navarro JA, Duran RV, De la Rosa MA, Hervas M. Respiratory cytochrome c oxidase can be efficiently reduced by the photosynthetic redox proteins cytochrome c6 and plastocyanin in cyanobacteria. FEBS Lett. 579: 3565-3568 (2005).

Olesen K, Veselov A, Zhao Y, Wang Y, Danner B, Scholes CP, Shapleigh JP. Spectroscopic, kinetic, and electrochemical characterization of heterologously expressed wild-type and mutant forms of copper-containing nitrite reductase from Rhodobacter sphaeroides 2.4.3. Biochemistry 37: 6086-6094 (1998).

Oswald O, Martin T, Dominy PJ, Graham IA. Plastid redox state and sugars: interactive regulators of nuclear-encoded photosynthetic gene expression. Proc. Natl. Acad. Sci. U.S.A. 98: 2047-2052 (2001).

Popova AV, Busheva MR. Cryoprotective effect of glycine betaine and glycerol is not based on a single mechanism. Cryo. Letters 22: 293-298 (2001).

Quinn JM, Merchant S. Two copper-responsive elements associated with the Chlamydomonas Cyc6 gene function as targets for transcriptional activators. Plant Cell 7: 623-628 (1995).

Sandhu JS, Webster CI, Gray JC. A/T-rich sequences act as quantitative enhancers of gene expression in transgenic tobacco and potato plants. Plant Mol. Biol. 37: 885-896 (1998).

Schottler MA, Flugel C, Thiele W, Bock R. Knock-out of the plastid-encoded PetL subunit results in reduced stability and accelerated leaf age-dependent loss of the cytochrome b6f complex. J. Biol. Chem. 282: 976-985 (2007).

Schottler MA, Kirchhoff H, Weis E. The role of plastocyanin in the adjustment of the photosynthetic electron transport to the carbon metabolism in tobacco. Plant Physiol. 136: 4265-4274 (2004).

Shao N, Vallon O, Dent R, Niyogi KK, Beck CF. Defects in the cytochrome b6/f complex prevent light-induced expression of nuclear genes involved in chlorophyll biosynthesis. Plant Physiol. 141: 1128-1137 (2006).

Shikanai T, Muller-Moule P, Munekage Y, Niyogi KK, Pilon M. PAA1, a P-type ATPase of Arabidopsis, functions in copper transport in chloroplasts. Plant Cell 15: 1333-1346 (2003).

Sommer F, Hippler M, Biehler K, Fischer N, Rochaix JD. Comparative analysis of photosensitivity in photosystem I donor and acceptor side mutants of Chlamydomonas reinhardtii. Plant Cell Environ. 26: 1881-1892 (2003).

Sullivan JA, Gray JC. Multiple plastid signals regulate the expression of the pea plastocyanin gene in pea and transgenic tobacco plants. Plant J. 32: 763-774 (2002).

Veselov A, Olesen K, Sienkiewicz A, Shapleigh JP, Scholes CP. Electronic structural information from Q-band ENDOR on the type 1 and type 2 copper liganding environment in wild-type and mutant forms of copper-containing nitrite reductase. Biochemistry 37: 6095-6105 (1998).

Weigel M, Pesaresi P, Leister D. Tracking the function of the cytochrome c6-like protein in higher plants. Trends Plant Sci. 8: 513-517 (2003).

Xie Y, Inoue T, Seike N, Matsumura H, Kanbayashi K, Itoh K, Kataoka K, Yamaguchi K, Suzuki S, Kai Y; Deligeer. Crystallization and preliminary X-ray crystallographic studies of dissimilatory nitrite reductase isolated from Hyphomicrobium denitrificans A3151. Acta Crystallogr. D. Biol. Crystallogr. 60: 2383-2386 (2004).

Xu Q, Guikema JA, Chitnis PR. Identification of surface-exposed domains on the reducing side of photosystem I. Plant Physiol. 106: 617-624 (1994).

Yamaguchi K, Kataoka K, Kobayashi M, Itoh K, Fukui A, Suzuki S. Characterization of two type 1 Cu sites of Hyphomicrobium denitrificans nitrite reductase: a new class of copper-containing nitrite reductases. Biochemistry 43: 14180-14188 (2004).

Yamasaki H, Hayashi M, Fukazawa M, Kobayashi Y, Shikanai T. SQUAMOSA promoter binding protein-like7 is a central regulator for copper homeostasis in Arabidopsis. Plant Cell 21: 347-361 (2009).

Number of references = 41

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