|
HORT640 - Metabolic Plant Physiology
References, phenylpropanoid
Abd El-Mawla AM, Beerhues L. Benzoic acid biosynthesis in cell cultures of Hypericum androsaemum. Planta 214: 727-733 (2002).
Abdulrazzak N, Pollet B, Ehlting J, Larsen K, Asnaghi C, Ronseau S, Proux C, Erhardt M, Seltzer V, Renou JP, Ullmann P, Pauly M, Lapierre C, Werck-Reichhart D. A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth. Plant Physiol. 140: 30-48 (2006).
Achnine L, Blancaflor EB, Rasmussen S, Dixon RA. Colocalization of L-phenylalanine ammonia-lyase and cinnamate 4-hydroxylase for metabolic channeling in phenylpropanoid biosynthesis. Plant Cell 16: 3098-3109 (2004).
Akashi T, Aoki T, Ayabe Si. Cloning and functional expression of a cytochrome P450 cDNA encoding 2-hydroxyisoflavanone synthase involved in biosynthesis of the isoflavonoid skeleton in licorice. Plant Physiol. 121: 821-828 (1999).
Akesson A, Persson S, Love J, Boss WF, Widell S, Sommarin M. Overexpression of the Ca2+-binding protein calreticulin in the endoplasmic reticulum improves growth of tobacco cell suspensions (Nicotiana tabacum) in high-Ca2+ medium. Physiol. Plant. 123: 92-99 (2005).
Allina SM, Pri-Hadash A, Theilmann DA, Ellis BE, Douglas CJ. 4-Coumarate:coenzyme A ligase in hybrid poplar. Properties of native enzymes, cDNA cloning, and analysis of recombinant enzymes. Plant Physiol. 116: 743-754 (1998).
Alvarez S, Marsh EL, Schroeder SG, Schachtman DP. Metabolomic and proteomic changes in the xylem sap of maize under drought. Plant Cell Environ. 31: 325-340 (2008).
Anterola AM, Jeon JH, Davin LB, Lewis NG. Transcriptional control of monolignol biosynthesis in Pinus taeda - Factors affecting monolignol ratios and carbon allocation in phenylpropanoid metabolism. J. Biol. Chem. 277: 18272-18280 (2002).
Anterola AM, Lewis NG. Trends in lignin modification: a comprehensive analysis of the effects of genetic manipulations/mutations on lignification and vascular integrity. Phytochemistry 61: 221-294 (2002).
Arfaoui A, El Hadrami A, Mabrouk Y, Sifi B, Boudabous A, El Hadrami I, Daayf F, Cherif M. Treatment of chickpea with Rhizobium isolates enhances the expression of phenylpropanoid defense-related genes in response to infection by Fusarium oxysporum f. sp. ciceris. Plant Physiol. Biochem. 45: 470-479 (2007).
Arguello-Astorga GR, Herrera-Estrella LR. Ancestral multipartite units in light-responsive plant promoters have structural features correlating with specific phototransduction pathways. Plant Physiol. 112: 1151-1166 (1996).
Aziz A, Gauthier A, Bezier A, Poinssot B, Joubert JM, Pugin A, Heyraud A, Baillieul F. Elicitor and resistance-inducing activities of beta-1,4 cellodextrins in grapevine, comparison with beta-1,3 glucans and alpha-1,4 oligogalacturonides. J. Exp. Bot. 58: 1463-1472 (2007).
Baldridge GD, O'Neill NR, Samac DA. Alfalfa (Medicago sativa L.) resistance to the root-lesion nematode, Pratylenchus penetrans: defense-response gene mRNA and isoflavonoid phytoalexin levels in roots. Plant Mol. Biol. 38: 999-1010 (1998).
Bartholomew DM, Van Dyk DE, Lau SM, O'Keefe DP, Rea PA, Viitanen PV. Alternate energy-dependent pathways for the vacuolar uptake of glucose and glutathione conjugates. Plant Physiol. 130: 1562-1572 (2002).
Bate NJ, Orr J, Ni W, Meromi A, Nadler-Hassar T, Doerner PW, Dixon RA, Lamb CJ, Elkind Y. Quantitative relationship between phenylalanine ammonia-lyase levels and phenylpropanoid accumulation in transgenic tobacco identifies a rate-determining step in natural product synthesis. Proc. Natl. Acad. Sci. U.S.A. 91: 7608-7612 (1994).
Bate NJ, Rothstein SJ. C6-volatiles derived from the lipoxygenase pathway induce a subset of defense-related genes. Plant J. 16: 561-569 (1998).
Batz O, Logemann E, Reinold S, Hahlbrock K. Extensive reprogramming of primary and secondary metabolism by fungal elicitor or infection in parsley cells. Biol. Chem. 379: 1127-1135 (1998).
Bednarek P, Schneider B, Svatos A, Oldham NJ, Hahlbrock K. Structural complexity, differential response to infection, and tissue specificity of indolic and phenylpropanoid secondary metabolism in Arabidopsis roots. Plant Physiol. 138: 1058-1070 (2005).
Bell-Lelong DA, Cusumano JC, Meyer K, Chapple C. Cinnamate-4-hydroxylase expression in Arabidopsis. Regulation in response to development and the environment. Plant Physiol. 113: 729-738 (1997).
Ben Zvi MM, Negre-Zakharov F, Masci T, Ovadis M, Shklarman E, Ben-Meir H, Tzfira T, Dudareva N, Vainstein A. Interlinking showy traits: co-engineering of scent and colour biosynthesis in flowers. Plant Biotechnol. J. 6: 403-415 (2008).
Bennett RN, Wenke T, Freudenberg B, Mellon FA, Ludwig-Muller J. The tu8 mutation of Arabidopsis thaliana encoding a heterochromatin protein 1 homolog causes defects in the induction of secondary metabolite biosynthesis. Plant Biol. (Stuttg.) 7: 348-357 (2005).
Berger B, Stracke R, Yatusevich R, Weisshaar B, Flugge UI, Gigolashvili T. A simplified method for the analysis of transcription factor-promoter interactions that allows high-throughput data generation. Plant J. 50: 911-916 (2007).
Berim A, Schneider B, Petersen M. Methyl allyl ether formation in plants: novel S-adenosyl L-methionine:coniferyl alcohol 9-O-methyltransferase from suspension cultures of three Linum species. Plant Mol. Biol. 64: 279-291 (2007).
Beritogoli I, Magel E, Abdel-Latif A, Charpentier JP, Jay-Allemand C, Breton C. Expression of genes encoding chalcone synthase, flavanone 3-hydroxylase and dihydroflavonol 4-reductase correlates with flavanol accumulation during heartwood formation in Juglans nigra. Tree Physiol. 22: 291-300 (2002).
Bernards MA, Susag LM, Bedgar DL, Anterola AM, Lewis NG. Induced phenylpropanoid metabolism during suberization and lignification: a comparative analysis. J. Plant Physiol. 157: 601-607 (2000).
Betz C, McCollum TG, Mayer RT. Differential expression of two cinnamate 4-hydroxylase genes in 'Valencia' orange (Citrus sinensis Osbeck). Plant Mol. Biol. 46: 741-748 (2001).
Bevan M, Shufflebottom D, Edwards K, Jefferson R, Schuch W. Tissue- and cell-specific activity of a phenylalanine ammonia-lyase promoter in transgenic plants. EMBO J. 8: 1899-1906 (1989).
Bharti AK, Khurana JP. Mutants of Arabidopsis as tools to understand the regulation of phenylpropanoid pathway and UVB protection mechanisms. Photochem. Photobiol. 65: 765-776 (1997).
Bi HH, Zeng RS, Su LM, An M, Luo SM. Rice allelopathy induced by methyl jasmonate and methyl salicylate. J. Chem. Ecol. 33: 1089-1103 (2007).
Bi JL, Felton GW, Murphy JB, Howles PA, Dixon RA, Lamb CJ. Do plant phenolics confer resistance to specialist and generalist insect herbivores?. J. Agric. Food Chem. 45: 4500-4504 (1997).
Bilodeau P, Udvardi MK, Peacock WJ, Dennis ES. A prolonged cold treatment-induced cytochrome P450 gene from Arabidopsis thaliana. Plant Cell Environ. 22: 791-800 (1999).
Blee K, Choi JW, O'Connell AP, Jupe SC, Schuch W, Lewis NG, Bolwell GP. Antisense and sense expression of cDNA coding for CYP73A15, a class II cinnamate 4-hydroxylase, leads to a delayed and reduced production of lignin in tobacco. Phytochemistry 57: 1159-1166 (2001).
Blount JW, Korth KL, Masoud SA, Rasmussen S, Lamb C, Dixon RA. Altering expression of cinnamic acid 4-hydroxylase in transgenic plants provides evidence for a feedback loop at the entry point into the phenylpropanoid pathway. Plant Physiol. 122: 107-116 (2000).
Blount JW, Masoud S, Sumner LW, Huhman D, Dixon RA. Over-expression of cinnamate 4-hydroxylase leads to increased accumulation of acetosyringone in elicited tobacco cell-suspension cultures. Planta 214: 902-910 (2002).
Boatright J, Negre F, Chen X, Kish CM, Wood B, Peel G, Orlova I, Gang D, Rhodes D, Dudareva N. Understanding in vivo benzenoid metabolism in petunia petal tissue. Plant Physiol. 135: 1993-2011 (2004).
Bomal C, Bedon F, Caron S, Mansfield SD, Levasseur C, Cooke JE, Blais S, Tremblay L, Morency MJ, Pavy N, Grima-Pettenati J, Séguin A, Mackay J. Involvement of Pinus taeda MYB1 and MYB8 in phenylpropanoid metabolism and secondary cell wall biogenesis: a comparative in planta analysis. J. Exp. Bot. 59: 3925-3939 (2008).
Borevitz JO, Xia Y, Blount J, Dixon RA, Lamb C. Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis. Plant Cell 12: 2383-2394 (2000).
Brand S, Holscher D, Schierhorn A, Svatos A, Schroder J, Schneider B. A type III polyketide synthase from Wachendorfia thyrsiflora and its role in diarylheptanoid and phenylphenalenone biosynthesis. Planta 224: 413-428 (2006).
Brincat MC, Gibson DM, Shuler ML. Alterations in Taxol production in plant cell culture via manipulation of the phenylalanine ammonia lyase pathway. Biotechnol. Prog. 18: 1149-1156 (2002).
Broeckling CD, Huhman DV, Farag MA, Smith JT, May GD, Mendes P, Dixon RA, Sumner LW. Metabolic profiling of Medicago truncatula cell cultures reveals the effects of biotic and abiotic elicitors on metabolism. J. Exp. Bot. 56: 323-336 (2005).
Campos R, Nonogaki H, Suslow T, Saltveit ME. Isolation and characterization of a wound inducible phenylalanine ammonia-lyase gene (LsPAL1) from Romaine lettuce leaves. Physiol. Plant. 121: 429-438 (2004).
Campos-Vargas R, Nonogaki H, Suslow T, Saltveit ME. Heat shock treatments delay the increase in wound-induced phenylalanine ammonia-lyase activity by altering its expression, not its induction in Romaine lettuce (Lactuca sativa) tissue. Physiol. Plant. 123: 82-91 (2005).
Cano-Delgado A, Penfield S, Smith C, Catley M, Bevan M. Reduced cellulose synthesis invokes lignification and defense responses in Arabidopsis thaliana. Plant J. 34: 351-362 (2003).
Canton FR, Suarez MF, Canovas FM. Molecular aspects of nitrogen mobilization and recycling in trees. Photosynth. Res. 83: 265-278 (2005).
Cerovic ZG, Ounis A, Cartelat A, Latouche G, Goulas Y, Meyer S, Moya I. The use of chlorophyll fluorescence excitation spectra for the non-destructive in situ assessment of UV-absorbing compounds in leaves. Plant Cell Environ. 25: 1663-1676 (2002).
Chang J, Luo J, He G. Regulation of polyphenols accumulation by combined overexpression/silencing key enzymes of phenylpropanoid pathway. Acta Biochim. Biophys. Sin. (Shanghai) 41: 123-130 (2009).
Chapple CC, Vogt T, Ellis BE, Somerville CR. An Arabidopsis mutant defective in the general phenylpropanoid pathway. Plant Cell 4: 1413-1424 (1992).
Chemler JA, Koffas MA. Metabolic engineering for plant natural product biosynthesis in microbes. Curr. Opin. Biotechnol. 19: 597-605 (2008).
Chen LM, Li KZ, Miwa T, Izui K. Overexpression of a cyanobacterial phosphoenolpyruvate carboxylase with diminished sensitivity to feedback inhibition in Arabidopsis changes amino acid metabolism. Planta 219: 440-449 (2004).
Choi YH, Tapias EC, Kim HK, Lefeber AW, Erkelens C, Verhoeven JT, Brzin J, Zel J, Verpoorte R. Metabolic discrimination of Catharanthus roseus leaves infected by phytoplasma using 1H-NMR spectroscopy and multivariate data analysis. Plant Physiol. 135: 2398-2410 (2004).
Chong J, Baltz R, Schmitt C, Beffa R, Fritig B, Saindrenan P. Downregulation of a pathogen-responsive tobacco UDP-Glc:phenylpropanoid glucosyltransferase reduces scopoletin glucoside accumulation, enhances oxidative stress, and weakens virus resistance. Plant Cell 14: 1093-1107 (2002).
Chong J, Pierrel MA, Atanassova R, Werck-Reichhart D, Fritig B, Saindrenan P. Free and conjugated benzoic acid in tobacco plants and cell cultures. Induced accumulation upon elicitation of defense responses and role as salicylic acid precursors. Plant Physiol. 125: 318-328 (2001).
Cle C, Hill LM, Niggeweg R, Martin CR, Guisez Y, Prinsen E, Jansen MA. Modulation of chlorogenic acid biosynthesis in Solanum lycopersicum; consequences for phenolic accumulation and UV-tolerance. Phytochemistry 69: 2149-2156 (2008).
Cochrane FC, Davin LB, Lewis NG. The Arabidopsis phenylalanine ammonia lyase gene family: kinetic characterization of the four PAL isoforms. Phytochemistry 65: 1557-1564 (2004).
Coleman HD, Park JY, Nair R, Chapple C, Mansfield SD. RNAi-mediated suppression of p-coumaroyl-CoA 3'-hydroxylase in hybrid poplar impacts lignin deposition and soluble secondary metabolism. Proc. Natl. Acad. Sci. U.S.A. 105: 4501-4506 (2008).
Connelly JA, Conn EE. Tyrosine biosynthesis in Sorghum bicolor: isolation and regulatory properties of arogenate dehydrogenase. Z. Naturforsch. [C] 41: 69-78 (1986).
Cortes-Cruz M, Snook M, McMullen MD. The genetic basis of C-glycosyl flavone B-ring modification in maize (Zea mays L.) silks. Genome 46: 182-94 (2003).
Cummins I, Brazier-Hicks M, Stobiecki M, Franski R, Edwards R. Selective disruption of wheat secondary metabolism by herbicide safeners. Phytochemistry 67: 1722-1730 (2006).
Cunningham OD, Edwards R. Modifying the acylation of flavonols in Petunia hybrida. Phytochemistry 69: 2016-2021 (2008).
Cvikrova M, Binarova P, Eder J, Vagner M, Hrubcova M, Zon J, Machackova I. Effect of inhibition of phenylalanine ammonia-lyase activity on growth of alfalfa cell suspension culture: Alterations in mitotic index, ethylene production, and contents of phenolics, cytokinins, and polyamines. Physiol. Plant. 107: 329-337 (1999).
Dauwe R, Morreel K, Goeminne G, Gielen B, Rohde A, Van Beeumen J, Ralph J, Boudet AM, Kopka J, Rochange SF, Halpin C, Messens E, Boerjan W. Molecular phenotyping of lignin-modified tobacco reveals associated changes in cell-wall metabolism, primary metabolism, stress metabolism and photorespiration. Plant J. 52: 263-285 (2007).
Davin LB, Wang CZ, Helms GL, Lewis NG. [13C]-Specific labeling of 8-2' linked (-)-cis-blechnic, (-)-trans-blechnic and (-)-brainic acids in the fern Blechnum spicant. Phytochemistry 62: 501-511 (2003).
De Luca V, Ibrahim RK. Enzymatic synthesis of polymethylated flavonols in Chrysosplenium americanum. I. Partial purification and some properties of S-adenosyl-L-methionine:flavonol 3-, 6-, 7-, and 4'-O-methyltransferases. Arch. Biochem. Biophys. 238: 596-605 (1985).
De Luca V, St Pierre B. The cell and developmental biology of alkaloid biosynthesis. Trends Plant Sci. 5: 168-173 (2000).
de Vetten N, ter Horst J, van Schaik HP, de Boer A, Mol J, Koes R. A cytochrome b5 is required for full activity of flavonoid 3', 5'-hydroxylase, a cytochrome P450 involved in the formation of blue flower colors. Proc. Natl. Acad. Sci. U.S.A. 96: 778-783 (1999).
Dean JV, Devarenne TP. Peroxidase-mediated conjugation of glutathione to unsaturated phenylpropanoids. Evidence against glutathione S-transferase involvement. Physiol. Plant. 99: 271-278 (1997).
Dean JV, Devarenne TP, Lee IS, Orlofsky LE. Properties of a maize glutathione-S-transferase that conjugates coumaric acid and other phenylpropanoids. Plant Physiol. 108: 985-994 (1995).
Dean JV, Devarenne TP, Lee IS, Orlofsky LE. Properties of a maize glutathione S-transferase that conjugates coumaric acid and other phenylpropanoids. Plant Physiol. 108: 985-994 (1995).
Delazar A, Biglari F, Esnaashari S, Nazemiyeh H, Talebpour AH, Nahar L, Sarker SD. GC-MS analysis of the essential oils, and the isolation of phenylpropanoid derivatives from the aerial parts of Pimpinella aurea. Phytochemistry 67: 2176-2181 (2006).
Deluc L, Barrieu F, Marchive C, Lauvergeat V, Decendit A, Richard T, Carde JP, Merillon JM, Hamdi S. Characterization of a grapevine R2R3-MYB transcription factor that regulates the phenylpropanoid pathway. Plant Physiol. 140: 499-511 (2006).
Devic M, Guilleminot J, Debeaujon I, Bechtold N, Bensaude E, Koornneef M, Pelletier G, Delseny M. The BANYULS gene encodes a DFR-like protein and is a marker of early seed coat development. Plant J. 19: 387-398 (1999).
Dhakulkar S, Ganapathi TR, Bhargava S, Bapat VA. Induction of hairy roots in Gmelina arborea Roxb. and production of verbascoside in hairy roots. Plant Sci. 169: 812-818 (2005).
Dixon RA, Howles PA, Lamb C, He XZ, Reddy JT. Prospects for the metabolic engineering of bioactive flavonoids and related phenylpropanoid compounds. Adv. Exp. Med. Biol. 439: 55-66 (1998).
Dixon RA, Lamb CJ, Masoud S, Sewalt VJ, Paiva NL. Metabolic engineering: prospects for crop improvement through the genetic manipulation of phenylpropanoid biosynthesis and defense responses--a review. Gene 179: 61-71 (1996).
Dixon RA, Paiva NL. Stress-induced phenylpropanoid metabolism. Plant Cell 7: 1085-1097 (1995).
Dixon RA, Steele CL. Flavonoids and isoflavonoids - a gold mine for metabolic engineering. Trends Plant Sci. 4: 394-400 (1999).
Domínguez M, Marin JC, Esquivel B, Cespedes CL. Pensteminoside, an unusual catalpol-type iridoid from Penstemon gentianoides HBK (Plantaginaceae). Phytochemistry 68: 1762-1766 (2007).
Dudareva N, Martin D, Kish CM, Kolosova N, Gorenstein N, Faldt J, Miller B, Bohlmann J. (E)-beta-ocimene and myrcene synthase genes of floral scent biosynthesis in snapdragon: function and expression of three terpene synthase genes of a new terpene synthase subfamily. Plant Cell 15: 1227-1241 (2003).
Dunphy PJ. Location and biosynthesis of monoterpenyl fatty acyl esters in rose petals. Phytochemistry 67: 1110-1119 (2006).
Ebel J, Schmidt WE, Loyal R. Phytoalexin synthesis in soybean cells: elicitor induction of phenylalanine ammonia-lyase and chalcone synthase mRNAs and correlation with phytoalexin accumulation. Arch. Biochem. Biophys. 232: 240-248 (1984).
Edahiro J, Seki M. Phenylpropanoid metabolite supports cell aggregate formation in strawberry cell suspension culture. J. Biosci. Bioeng. 102: 8-13 (2006).
Ehlting J, Buttner D, Wang Q, Douglas CJ, Somssich IE, Kombrink E. Three 4-coumarate:coenzyme A ligases in Arabidopsis thaliana represent two evolutionarily divergent classes in angiosperms. Plant J. 19: 9-20 (1999).
Ehlting J, Mattheus N, Aeschliman DS, Li E, Hamberger B, Cullis IF, Zhuang J, Kaneda M, Mansfield SD, Samuels L, Ritland K, Ellis BE, Bohlmann J, Douglas CJ. Global transcript profiling of primary stems from Arabidopsis thaliana identifies candidate genes for missing links in lignin biosynthesis and transcriptional regulators of fiber differentiation. Plant J. 42: 618-640 (2005).
Ehlting J, Shin JJ, Douglas CJ. Identification of 4-coumarate:coenzyme A ligase (4CL) substrate recognition domains. Plant J. 27: 455-465 (2001).
Eichenseer H, Bi JL, Felton GW. Indiscrimination of Manduca sexta larvae to overexpressed and underexpressed levels of phenylalanine ammonia-lyase in tobacco leaves. Entomol. Exp. Appl. 87: 73-78 (1998).
el Jaber-Vazdekis N, Barres ML, Ravelo AG, Zarate R. Effects of elicitors on tropane alkaloids and gene expression in Atropa baetica transgenic hairy roots. J. Nat. Prod. 71: 2026-2031 (2008).
Elkind Y, Edwards R, Mavandad M, Hedrick SA, Ribak O, Dixon RA, Lamb CJ. Abnormal plant development and down-regulation of phenylpropanoid biosynthesis in transgenic tobacco containing a heterologous phenylalanine ammonia-lyase gene. Proc. Natl. Acad. Sci. U.S.A. 87: 9057-9061 (1990).
Farhi M, Dudareva N, Masci T, Weiss D, Vainstein A, Abeliovich H. Synthesis of the food flavoring methyl benzoate by genetically engineered Saccharomyces cerevisiae. J. Biotechnol. 122: 307-315 (2006).
Fellenberg C, Milkowski C, Hause B, Lange PR, Böttcher CT, Schmidt J, Vogt T. Tapetum specific location of a cation-dependent O-methyltransferase in Arabidopsis thaliana. Plant J. 56: 132-145 (2008).
Felton GW, Korth KL, Bi JL, Wesley SV, Huhman DV, Mathews MC, Murphy JB, Lamb C, Dixon RA. Inverse relationship between systemic resistance of plants to microorganisms and to insect herbivory. Curr. Biol. 9: 317-320 (1999).
Ferrer JL, Austin MB, Stewart C Jr, Noel JP. Structure and function of enzymes involved in the biosynthesis of phenylpropanoids. Plant Physiol. Biochem. 46: 356-370 (2008).
Ferrer JL, Zubieta C, Dixon RA, Noel JP. Crystal structures of alfalfa caffeoyl coenzyme A 3-O-methyltransferase. Plant Physiol. 137: 1009-1017 (2005).
Flors V, Miralles MC, Gonzalez-Bosch C, Carda M, Garcia-Agustin P. Induction of protection against the necrotrophic pathogens Phytophthora citrophthora and Alternaria solani in Lycopersicon esculentum Mill. by a novel synthetic glycoside combined with amines. Planta 216: 929-938 (2003).
Focks N, Sagasser M, Weisshaar B, Benning C. Characterization of tt15, a novel transparent testa mutant of Arabidopsis thaliana (L.) Heynh. Planta 208: 352-357 (1999).
Ford JD, Huang KS, Wang HB, Davin LB, Lewis NG. Biosynthetic pathway to the cancer chemopreventive secoisolariciresinol diglucoside-hydroxymethyl glutaryl ester- linked lignan oligomers in flax (Linum usitatissimum) seed. J. Nat. Prod. 64: 1388-1397 (2001).
Fraissinet-Tachet L, Baltz R, Chong J, Kauffmann S, Fritig B, Saindrenan P. Two tobacco genes induced by infection, elicitor and salicylic acid encode glucosyltransferases acting on phenylpropanoids and benzoic acid derivatives, including salicylic acid. FEBS Lett. 437: 319-323 (1998).
Franca SC, Roberto PG, Marins MA, Puga RD, Rodrigues A, Pereira JO. Biosynthesis of secondary metabolites in sugarcane. Genet. Mol. Biol. 24: 243-250 (2001).
Frank MR, Deyneka JM, Schuler MA. Cloning of wound-induced cytochrome P450 monooxygenases expressed in pea. Plant Physiol. 110: 1035-1046 (1996).
Franke R, Hemm MR, Denault JW, Ruegger MO, Humphreys JM, Chapple C. Changes in secondary metabolism and deposition of an unusual lignin in the ref8 mutant of Arabidopsis. Plant J. 30: 47-59 (2002).
Franke R, Humphreys JM, Hemm MR, Denault JW, Ruegger MO, Cusumano JC, Chapple C. The Arabidopsis REF8 gene encodes the 3-hydroxylase of phenylpropanoid metabolism. Plant J. 30: 33-45 (2002).
Franklin G, Conceicao LF, Kombrink E, Dias AC. Xanthone biosynthesis in Hypericum perforatum cells provides antioxidant and antimicrobial protection upon biotic stress. Phytochemistry 70: 60-68 (2009).
Frick S, Kutchan TM. Molecular cloning and functional expression of O-methyltransferases common to isoquinoline alkaloid and phenylpropanoid biosynthesis. Plant J. 17: 329-339 (1999).
Frick S, Ounaroon A, Kutchan TM. Combinatorial biochemistry in plants: the case of O-methyltransferases. Phytochemistry 56: 1-4 (2001).
Fritz C, Palacios-Rojas N, Feil R, Stitt M. Regulation of secondary metabolism by the carbon-nitrogen status in tobacco: nitrate inhibits large sectors of phenylpropanoid metabolism. Plant J. 46: 533-548 (2006).
Fu CX, Cheng LQ, Lv XF, Zhao DX, Ma F. Methyl jasmonate stimulates jaceosidin and hispidulin production in cell cultures of Saussurea medusa. Appl. Biochem. Biotechnol. 134: 89-96 (2006).
Fujiwara M, Umemura K, Kawasaki T, Shimamoto K. Proteomics of Rac GTPase signaling reveals its predominant role in elicitor-induced defense response of cultured rice cells. Plant Physiol. 140: 734-745 (2006).
Gachon CM, Langlois-Meurinne M, Henry Y, Saindrenan P. Transcriptional co-regulation of secondary metabolism enzymes in Arabidopsis: functional and evolutionary implications. Plant Mol. Biol. 58: 229-245 (2005).
Galis I, Simek P, Narisawa T, Sasaki M, Horiguchi T, Fukuda H, Matsuoka K. A novel R2R3 MYB transcription factor NtMYBJS1 is a methyl jasmonate-dependent regulator of phenylpropanoid-conjugate biosynthesis in tobacco. Plant J. 46: 573-592 (2006).
Gang DR. Evolution of flavors and scents. Annu. Rev. Plant Biol. 56: 301-325 (2005).
Gang DR, Beuerle T, Ullmann P, Werck-Reichhart D, Pichersky E. Differential production of meta hydroxylated phenylpropanoids in sweet basil peltate glandular trichomes and leaves is controlled by the activities of specific acyltransferases and hydroxylases. Plant Physiol. 130: 1536-1544 (2002).
Gang DR, Kasahara H, Xia ZQ, Vander Mijnsbrugge K, Bauw G, Boerjan W, Van Montagu M, Davin LB, Lewis NG. Evolution of plant defense mechanisms. Relationships of phenylcoumaran benzylic ether reductases to pinoresinol-lariciresinol and isoflavone reductases. J. Biol. Chem. 274: 7516-7527 (1999).
Gang DR, Wang J, Dudareva N, Nam KH, Simon JE, Lewinsohn E, Pichersky E. An investigation of the storage and biosynthesis of phenylpropenes in sweet basil. Plant Physiol. 125: 539-555 (2001).
Glassgen WE, Rose A, Madlung J, Koch W, Gleitz J, Seitz HU. Regulation of enzymes involved in anthocyanin biosynthesis in carrot cell cultures in response to treatment with ultraviolet light and fungal elicitors. Planta 204: 490-498 (1998).
Goes da Silva F, Iandolino A, Al-Kayal F, Bohlmann MC, Cushman MA, Lim H, Ergul A, Figueroa R, Kabuloglu EK, Osborne C, Rowe J, Tattersall E, Leslie A, Xu J, Baek J, Cramer GR, Cushman JC, Cook DR. Characterizing the grape transcriptome. Analysis of expressed sequence tags from multiple Vitis species and development of a compendium of gene expression during berry development. Plant Physiol. 139: 574-597 (2005).
Goicoechea M, Lacombe E, Legay S, Mihaljevic S, Rech P, Jauneau A, Lapierre C, Pollet B, Verhaegen D, Chaubet-Gigot N, Grima-Pettenati J. EgMYB2, a new transcriptional activator from Eucalyptus xylem, regulates secondary cell wall formation and lignin biosynthesis. Plant J. 43: 553-567 (2005).
Gomez-Vasquez R, Day R, Buschmann H, Randles S, Beeching JR, Cooper RM. Phenylpropanoids, phenylalanine ammonia lyase and peroxidases in elicitor-challenged cassava (Manihot esculenta) suspension cells and leaves. Ann. Bot. (Lond.) 94: 87-97 (2004).
Gonzalez A, Zhao M, Leavitt JM, Lloyd AM. Regulation of the anthocyanin biosynthetic pathway by the TTG1/bHLH/Myb transcriptional complex in Arabidopsis seedlings. Plant J. 53: 814-827 (2008).
Gorlach J, Raesecke HR, Rentsch D, Regenass M, Roy P, Zala M, Keel C, Boller T, Amrhein N, Schmid J. Temporally distinct accumulation of transcripts encoding enzymes of the prechorismate pathway in elicitor-treated, cultured tomato cells. Proc. Natl. Acad. Sci. U.S.A. 92: 3166-3170 (1995).
Grace SC, Logan BA. Energy dissipation and radical scavenging by the plant phenylpropanoid pathway. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 355: 1499-1510 (2000).
Grand C, Sarni F, Lamb CJ. Rapid induction by fungal elicitor of the synthesis of cinnamyl-alcohol dehydrogenase, a specific enzyme of lignin synthesis. Eur. J. Biochem. 169: 73-77 (1987).
Gray-Mitsumune M, Molitor EK, Cukovic D, Carlson JE, Douglas CJ. Developmentally regulated patterns of expression directed by poplar PAL promoters in transgenic tobacco and poplar. Plant Mol. Biol. 39: 657-669 (1999).
Grotewold E, Chamberlin M, Snook M, Siame B, Butler L, Swenson J, Maddock S, Clair GS, Bowen B. Engineering secondary metabolism in maize cells by ectopic expression of transcription factors. Plant Cell 10: 721-740 (1998).
Guillet G, Poupart J, Basurco J, De Luca V. Expression of tryptophan decarboxylase and tyrosine decarboxylase genes in tobacco results in altered biochemical and physiological phenotypes. Plant Physiol. 122: 933-944 (2000).
Guterman I, Masci T, Chen X, Negre F, Pichersky E, Dudareva N, Weiss D, Vainstein A. Generation of phenylpropanoid pathway-derived volatiles in transgenic plants: rose alcohol acetyltransferase produces phenylethyl acetate and benzyl acetate in petunia flowers. Plant Mol. Biol. 60: 555-563 (2006).
Hain R, Grimmig B. Chapter 11. Modification of Plant Secondary Metabolism by Genetic Engineering. In "Metabolic Engineering of Plant Secondary Metabolism" (Verpoorte R, Alfermann AW, eds), Kluwer Academic Publishers, Dortrecht, The Netherlands, pp. 217-231 (2000).
Hamiduzzaman MM, Jakab G, Barnavon L, Neuhaus JM, Mauch-Mani B. beta-Aminobutyric acid-induced resistance against downy mildew in grapevine acts through the potentiation of callose formation and jasmonic acid signaling. Mol. Plant Microbe Interact. 18: 819-829 (2005).
Harding SA, Leshkevich J, Chiang VL, Tsai CJ. Differential substrate inhibition couples kinetically distinct 4-coumarate:coenzyme A ligases with spatially distinct metabolic roles in quaking aspen. Plant Physiol. 128: 428-438 (2002).
Hartmann U, Sagasser M, Mehrtens F, Stracke R, Weisshaar B. Differential combinatorial interactions of cis-acting elements recognized by R2R3-MYB, BZIP, and BHLH factors control light-responsive and tissue-specific activation of phenylpropanoid biosynthesis genes. Plant Mol. Biol. 57: 155-171 (2005).
Hashimoto M, Hatanaka Y, Nabeta K. Novel photoreactive cinnamic acid analogues to elucidate phenylalanine ammonia-lyase. Bioorg. Med. Chem. Lett. 10: 2481-2483 (2000).
Hauffe KD, Lee SP, Subramaniam R, Douglas CJ. Combinatorial interactions between positive and negative cis-acting elements control spatial patterns of 4CL-1 expression in transgenic tobacco. Plant J. 4: 235-253 (1993).
He XZ, Dixon RA. Genetic manipulation of isoflavone 7-O-methyltransferase enhances biosynthesis of 4'-O-methylated isoflavonoid phytoalexins and disease resistance in alfalfa. Plant Cell 12: 1689-1702 (2000).
He XZ, Reddy JT, Dixon RA. Stress responses in alfalfa (Medicago sativa L). XXII. cDNA cloning and characterization of an elicitor-inducible isoflavone 7-O-methyltransferase. Plant Mol. Biol. 36: 43-54 (1998).
Heide L. Chapter 12. Expression of the Bacterial ubiC Gene Opens a New Biosynthetic Pathway in Plants. In "Metabolic Engineering of Plant Secondary Metabolism" (Verpoorte R, Alfermann AW, eds), Kluwer Academic Publishers, Dortrecht, The Netherlands, pp. 233-251 (2000).
Heinekamp T, Kuhlmann M, Lenk A, Strathmann A, Droge-Laser W. The tobacco bZIP transcription factor BZI-1 binds to G-box elements in the promoters of phenylpropanoid pathway genes in vitro, but it is not involved in their regulation in vivo. Mol. Genet. Genomics 267: 16-26 (2002).
Heinzle E, Matsuda F, Miyagawa H, Wakasa K, Nishioka T. Estimation of metabolic fluxes, expression levels and metabolite dynamics of a secondary metabolic pathway in potato using label pulse-feeding experiments combined with kinetic network modelling and simulation. Plant J. 50: 176-187 (2007).
Hemm MR, Herrmann KM, Chapple C. AtMYB4: a transcription factor general in the battle against UV. Trends Plant Sci. 6: 135-136 (2001).
Hemm MR, Rider SD, Ogas J, Murry DJ, Chapple C. Light induces phenylpropanoid metabolism in Arabidopsis roots. Plant J. 38: 765-778 (2004).
Hemm MR, Ruegger MO, Chapple C. The Arabidopsis ref2 mutant is defective in the gene encoding CYP83A1 and shows both phenylpropanoid and glucosinolate phenotypes. Plant Cell 15: 179-194 (2003).
Henkes S, Sonnewald U, Badur R, Flachmann R, Stitt M. A small decrease of plastid transketolase activity in antisense tobacco transformants has dramatic effects on photosynthesis and phenylpropanoid metabolism. Plant Cell 13: 535-551 (2001).
Herrig V, Ferrarese Mde L, Suzuki LS, Rodrigues JD, Ferrarese-Filho O. Peroxidase and phenylalanine ammonia-lyase activities, phenolic acid contents, and allelochemicals-inhibited root growth of soybean. Biol. Res. 35: 59-66. (2002).
Hisaminato H, Murata M, Homma S. Relationship between the enzymatic browning and phenylalanine ammonia-lyase activity of cut lettuce, and the prevention of browning by inhibitors of polyphenol biosynthesis. Biosci. Biotechnol. Biochem. 65: 1016-1021 (2001).
Hoffmann L, Besseau S, Geoffroy P, Ritzenthaler C, Meyer D, Lapierre C, Pollet B, Legrand M. Silencing of hydroxycinnamoyl-coenzyme A shikimate/quinate hydroxycinnamoyltransferase affects phenylpropanoid biosynthesis. Plant Cell 16: 1446-1465 (2004).
Hoffmann L, Maury S, Martz F, Geoffroy P, Legrand M. Purification, cloning, and properties of an acyltransferase controlling shikimate and quinate ester intermediates in phenylpropanoid metabolism. J. Biol. Chem. 278: 95-103 (2003).
Hoffmann T, Kalinowski G, Schwab W. RNAi-induced silencing of gene expression in strawberry fruit (Fragaria x ananassa) by agroinfiltration: a rapid assay for gene function analysis. Plant J. 48: 818-826 (2006).
Hollander H, Kiltz HH, Amrhein N. Interference of L-alpha-aminooxy-beta-phenylpropionic acid with phenylalanine metabolism in buckwheat. Z. Naturforsch. [C] 34: 1162-1173 (1979).
Hosoya T, Yun YS, Kunugi A. Antioxidant phenylpropanoid glycosides from the leaves of Wasabia japonica. Phytochemistry 69: 827-832 (2008).
Hotter GS. Elicitor-induced oxidative burst and phenylpropanoid metabolism in Pinus radiata cell suspension cultures. Aust. J. Plant Physiol. 24: 797-804 (1997).
Howles PA, Sewalt V, Paiva NL, Elkind Y, Bate NJ, Lamb C, Dixon RA. Overexpression of L-phenylalanine ammonia-lyase in transgenic tobacco plants reveals control points for flux into phenylpropanoid biosynthesis. Plant Physiol. 112: 1617-1624 (1996).
Hrazdina G, Wagner GJ. Metabolic pathways as enzyme complexes: evidence for the synthesis of phenylpropanoids and flavonoids on membrane associated enzyme complexes. Arch. Biochem. Biophys. 237: 88-100 (1985).
Hrubcova M, Cvikrova M, Eder J, Zon J, Machackova I. Effect of inhibition of phenylpropanoid biosynthesis on peroxidase and IAA-oxidase activities and auxin content in alfalfa suspension cultures. Plant Physiol. Biochem. 38: 949-956 (2000).
Hsiao YY, Tsai WC, Kuoh CS, Huang TH, Wang HC, Wu TS, Leu YL, Chen WH, Chen HH. Comparison of transcripts in Phalaenopsis bellina and Phalaenopsis equestris (Orchidaceae) flowers to deduce monoterpene biosynthesis pathway. BMC Plant Biol. 6: 14 (2006).
Hu WJ, Kawaoka A, Tsai CJ, Lung J, Osakabe K, Ebinuma H, Chiang VL. Compartmentalized expression of two structurally and functionally distinct 4-coumarate:CoA ligase genes in aspen (Populus tremuloides). Proc. Natl. Acad. Sci. U.S.A. 95: 5407-5412 (1998).
Humphreys JM, Hemm MR, Chapple C. New routes for lignin biosynthesis defined by biochemical characterization of recombinant ferulate 5-hydroxylase, a multifunctional cytochrome P450-dependent monooxygenase. Proc. Natl. Acad. Sci. U.S.A. 96: 10045-10050 (1999).
Huo C, Liang H, Zhao Y, Wang B, Zhang Q. Neolignan glycosides from Symplocos caudata. Phytochemistry 69: 788-795 (2008).
Iijima Y, Davidovich-Rikanati R, Fridman E, Gang DR, Bar E, Lewinsohn E, Pichersky E. The biochemical and molecular basis for the divergent patterns in the biosynthesis of terpenes and phenylpropenes in the peltate glands of three cultivars of basil. Plant Physiol. 136: 3724-3736 (2004).
Inoue K. Carotenoid hydroxylation--P450 finally! Trends Plant Sci. 9: 515-517 (2004).
Ishihara A, Asada Y, Takahashi Y, Yabe N, Komeda Y, Nishioka T, Miyagawa H, Wakasa K. Metabolic changes in Arabidopsis thaliana expressing the feedback-resistant anthranilate synthase alpha subunit gene OASA1D. Phytochemistry 67: 2349-2362 (2006).
Ishikawa A, Kuma T, Sasaki H, Sasaki N, Ozeki Y, Kobayashi N, Kitamura Y. Constitutive expression of bergaptol O-methyltransferase in Glehnia littoralis cell cultures. Plant Cell Rep. 28: 257-265 (2009).
Jaakola L, Maatta-Riihinen K, Karenlampi S, Hohtola A. Activation of flavonoid biosynthesis by solar radiation in bilberry (Vaccinium myrtillus L) leaves. Planta 218: 721-728 (2004).
Jacquard C, Mazeyrat-Gourbeyre F, Devaux P, Boutilier K, Baillieul F, Clement C. Microspore embryogenesis in barley: anther pre-treatment stimulates plant defence gene expression. Planta 229: 393-402 (2009).
Jenett-Siems K, Weigl R, Kaloga M, Schulz J, Eich E. Ipobscurines C and D: macrolactam-type indole alkaloids from the seeds of Ipomoea obscura. Phytochemistry 62: 1257-1263 (2003).
Johnson KS, Felton GW. Plant phenolics as dietary antioxidants for herbivorous insects: A test with genetically modified tobacco. J. Chem. Ecol. 27: 2579-2597 (2001).
Jorgensen K, Rasmussen AV, Morant M, Nielsen AH, Bjarnholt N, Zagrobelny M, Bak S, Moller BL. Metabolon formation and metabolic channeling in the biosynthesis of plant natural products. Curr. Opin. Plant Biol. 8: 280-291 (2005).
Joshi CP, Chiang VL. Conserved sequence motifs in plant S-adenosyl-L-methionine-dependent methyltransferases. Plant Mol. Biol. 37: 663-674 (1998).
Juvvadi PR, Seshime Y, Kitamoto K. Genomics reveals traces of fungal phenylpropanoid-flavonoid metabolic pathway in the filamentous fungus Aspergillus oryzae. J. Microbiol. 43 :475-486 (2005).
Kai K, Mizutani M, Kawamura N, Yamamoto R, Tamai M, Yamaguchi H, Sakata K, Shimizu BI. Scopoletin is biosynthesized via ortho-hydroxylation of feruloyl CoA by a 2-oxoglutarate-dependent dioxygenase in Arabidopsis thaliana. Plant J. 55: 989-999 (2008).
Kai K, Shimizu B, Mizutani M, Watanabe K, Sakata K. Accumulation of coumarins in Arabidopsis thaliana. Phytochemistry 67: 379-386 (2006).
Kakiuchi Y, Galis I, Tamogami S, Wabiko H. Reduction of polar auxin transport in tobacco by the tumorigenic Agrobacterium tumefaciens AK-6b gene. Planta 223: 237-247 (2006).
Kandan A, Commare RR, Nandakumar R, Ramiah M, Raguchander T, Samiyappan R. Induction of phenylpropanoid metabolism by Pseudomonas fluorescens against tomato spotted wilt virus in tomato. Folia Microbiol. (Praha) 47: 121-129 (2002).
Kaneda M, Rensing KH, Wong JC, Banno B, Mansfield SD, Samuels AL. Tracking monolignols during wood development in Pinus contorta var. latifolia. Plant Physiol. 147: 1750-1760 (2008).
Kang K, Back K. Production of phenylpropanoid amides in recombinant Escherichia coli. Metab. Eng. 11: 64-68 (2009).
Kang MK, Park KS, Choi D. Coordinated expression of defense-related genes by TMV infection or salicylic acid treatment in tobacco. Mol. Cells 8: 388-392 (1998).
Kao YY, Harding SA, Tsai CJ. Differential expression of two distinct phenylalanine ammonia-lyase genes in condensed tannin-accumulating and lignifying cells of quaking aspen. Plant Physiol. 130: 796-807 (2002).
Kasahara H, Jiao Y, Bedgar DL, Kim SJ, Patten AM, Xia ZQ, Davin LB, Lewis NG. Pinus taeda phenylpropenal double-bond reductase: purification, cDNA cloning, heterologous expression in Escherichia coli, and subcellular localization in P. taeda. Phytochemistry 67: 1765-1780 (2006).
Katsuyama Y, Matsuzawa M, Funa N, Horinouchi S. Production of curcuminoids by Escherichia coli carrying an artificial biosynthesis pathway. Microbiology 154: 2620-2628 (2008).
Kauss H, Franke R, Krause K, Conrath U, Jeblick W, Grimmig B, Matern U. Conditioning of parsley (Petroselinum crispum L.) suspension cells increases elicitor-induced incorporation of cell wall phenolics. Plant Physiol. 102: 459-466 (1993).
Kawaoka A, Ebinuma H. Transcriptional control of lignin biosynthesis by tobacco LIM protein. Phytochemistry 57: 1149-1157 (2001).
Kawaoka A, Kaothien P, Yoshida K, Endo S, Yamada K, Ebinuma H. Functional analysis of tobacco LIM protein ntlim1 involved in lignin biosynthesis. Plant J. 22: 289-301 (2000).
Kervinen T, Peltonen S, Teeri TH, Karjalainen R. Differential expression of phenylalanine ammonia-lyase genes in barley induced by fungal infection or elicitors. New Phytol. 139: 293-300 (1998).
Khan F, Peter XK, Mackenzie RM, Katsoulis L, Gehring R, Munro OQ, van Heerden FR, Drewes SE. Venusol from Gunnera perpensa: structural and activity studies. Phytochemistry 65: 1117-1121 (2004).
Kim BG, Lee Y, Hur HG, Lim Y, Ahn JH. Flavonoid 3'-O-methyltransferase from rice: cDNA cloning, characterization and functional expression. Phytochemistry 67: 387-394 (2006).
Kim JK, Bamba T, Harada K, Fukusaki E, Kobayashi A. Time-course metabolic profiling in Arabidopsis thaliana cell cultures after salt stress treatment. J. Exp. Bot. 58: 415-424 (2007).
Kim SH, Virmani D, Wake K, MacDonald K, Kronstad JW, Ellis BE. Cloning and disruption of a phenylalanine ammonia-lyase gene from Ustilago maydis. Curr. Genet. 40: 40-48 (2001).
Kliebenstein DJ. Secondary metabolites and plant/environment interactions: a view through Arabidopsis thaliana tinged glasses. Plant Cell Environ. 27: 675-684 (2004).
Kliebenstein DJ, Rowe HC, Denby KJ. Secondary metabolites influence Arabidopsis/Botrytis interactions: variation in host production and pathogen sensitivity. Plant J. 44: 25-36 (2005).
Knappe S, Lottgert T, Schneider A, Voll L, Flugge UI, Fischer K. Characterization of two functional phosphoenolpyruvate/phosphate translocator (PPT) genes in Arabidopsis--AtPPT1 may be involved in the provision of signals for correct mesophyll development. Plant J. 36: 411-420 (2003).
Koeduka T, Orlova I, Baiga TJ, Noel JP, Dudareva N, Pichersky E. The lack of floral synthesis and emission of isoeugenol in Petunia axillaris subsp. parodii is due to a mutation in the isoeugenol synthase gene. Plant J. 58: 961-969 (2009).
Koopmann E, Logemann E, Hahlbrock K. Regulation and functional expression of cinnamate 4-hydroxylase from parsley. Plant Physiol. 119: 49-56 (1999).
Korth KL, Blount JW, Chen F, Rasmussen S, Lamb C, Dixon RA. Changes in phenylpropanoid metabolites associated with homology-dependent silencing of phenylalanine ammonia-lyase and its somatic reversion in tobacco. Physiol. Plant. 111: 137-143 (2001).
Kota P, Guo D, Zubieta C, Noel J, Dixon RA. O-Methylation of benzaldehyde derivatives by "lignin specific" caffeic acid 3-O-methyltransferase. Phytochemistry 65: 837-846 (2004).
Koutaniemi S, Warinowski T, Karkonen A, Alatalo E, Fossdal CG, Saranpaa P, Laakso T, Fagerstedt KV, Simola LK, Paulin L, Rudd S, Teeri TH. Expression profiling of the lignin biosynthetic pathway in Norway spruce using EST sequencing and real-time RT-PCR. Plant Mol. Biol. 65: 311-328 (2007).
Kreft S, Strukelj B, Gaberscik A, Kreft I. Rutin in buckwheat herbs grown at different UV-B radiation levels: comparison of two UV spectrophotometric and an HPLC method. J. Exp. Bot. 53: 1801-1804 (2002).
Krens FA, Keizer LCP, Capel IEM. Transgenic caraway, Carum carvi L.: a model species for metabolic engineering. Plant Cell Rep. 17: 39-43 (1997).
Kumar A, Ellis BE. 4-Coumarate:CoA ligase gene family in Rubus idaeus: cDNA structures, evolution, and expression. Plant Mol. Biol. 51: 327-340 (2003).
Kumar A, Ellis BE. The phenylalanine ammonia-lyase gene family in raspberry. Structure, expression, and evolution. Plant Physiol. 127: 230-239 (2001).
Kutchan TM. A role for intra- and intercellular translocation in natural product biosynthesis. Curr. Opin. Plant Biol. 8: 292-300 (2005).
Laitinen RA, Ainasoja M, Broholm SK, Teeri TH, Elomaa P. Identification of target genes for a MYB-type anthocyanin regulator in Gerbera hybrida. J. Exp. Bot. 59: 3691-3703 (2008).
Lam KC, Ibrahim RK, Behdad B, Dayanandan S. Structure, function, and evolution of plant O-methyltransferases. Genome 50: 1001-1013 (2007).
Lane AL, Kubanek J. Structure-activity relationship of chemical defenses from the freshwater plant Micranthemum umbrosum. Phytochemistry 67: 1224-1231 (2006).
Lanot A, Hodge D, Jackson RG, George GL, Elias L, Lim EK, Vaistij FE, Bowles DJ. The glucosyltransferase UGT72E2 is responsible for monolignol 4-O-glucoside production in Arabidopsis thaliana. Plant J. 48: 286-295 (2006).
Lanot A, Hodge D, Lim EK, Vaistij FE, Bowles DJ. Redirection of flux through the phenylpropanoid pathway by increased glucosylation of soluble intermediates. Planta 228: 609-616 (2008).
Larsen K. Molecular cloning and characterization of cDNAs encoding cinnamoyl CoA reductase (CCR) from barley (Hordeum vulgare) and potato (Solanum tuberosum). J. Plant Physiol. 161: 105-112 (2004).
Lauvergeat V, Rech P, Jauneau A, Guez C, Coutos-Thevenot P, Grima-Pettenati J. The vascular expression pattern directed by the Eucalyptus gunnii cinnamyl alcohol dehydrogenase EgCAD2 promoter is conserved among woody and herbaceous plant species. Plant Mol. Biol. 50: 497-509 (2002).
Lawton MA, Dixon RA, Hahlbrock K, Lamb CJ. Elicitor induction of mRNA activity. Rapid effects of elicitor on phenylalanine ammonia-lyase and chalcone synthase mRNA activities in bean cells. Eur. J. Biochem. 130: 131-139 (1983).
Lee D, Meyer K, Chapple C, Douglas CJ. Antisense suppression of 4-coumarate:coenzyme A ligase activity in Arabidopsis leads to altered lignin subunit composition. Plant Cell 9: 1985-1998 (1997).
Lee SJ, Suh MC, Kim S, Kwon JK, Kim M, Paek KH, Choi D, Kim BD. Molecular cloning of a novel pathogen-inducible cDNA encoding a putative acyl-CoA synthetase from Capsicum annuum L. Plant Mol. Biol. 46: 661-671 (2001).
Lehfeldt C, Shirley AM, Meyer K, Ruegger MO, Cusumano JC, Viitanen PV, Strack D, Chapple C. Cloning of the SNG1 gene of Arabidopsis reveals a role for a serine carboxypeptidase-like protein as an acyltransferase in secondary metabolism. Plant Cell 12: 1295-1306 (2000).
Leonard E, Yan Y, Koffas MA. Functional expression of a P450 flavonoid hydroxylase for the biosynthesis of plant-specific hydroxylated flavonols in Escherichia coli. Metab. Eng. 8: 172-181 (2006).
Leser C, Treutter D. Effects of nitrogen supply on growth, contents of phenolic compounds and pathogen (scab) resistance of apple trees. Physiol. Plant. 123: 49-56 (2005).
Levin RA, Raguso RA, McDade LA. Fragrance chemistry and pollinator affinities in Nyctaginaceae. Phytochemistry 58: 429-440 (2001).
Lewis DR, Miller ND, Splitt BL, Wu G, Spalding EP. Separating the roles of acropetal and basipetal auxin transport on gravitropism with mutations in two Arabidopsis multidrug resistance-like ABC transporter genes. Plant Cell 19: 1838-1850 (2007).
Leyva A, Liang X, Pintor-Toro JA, Dixon RA, Lamb CJ. Cis-element combinations determine phenylalanine ammonia-lyase gene tissue-specific expression patterns. Plant Cell 4: 263-271 (1992).
Li H, Flachowsky H, Fischer TC, Hanke MV, Forkmann G, Treutter D, Schwab W, Hoffmann T, Szankowski I. Maize Lc transcription factor enhances biosynthesis of anthocyanins, distinct proanthocyanidins and phenylpropanoids in apple (Malus domestica Borkh.). Planta 226: 1243-1254 (2007).
Liang XW, Dron M, Cramer CL, Dixon RA, Lamb CJ. Differential regulation of phenylalanine ammonia-lyase genes during plant development and by environmental cues. J. Biol. Chem. 264: 14486-14492 (1989).
Lim EK, Li Y, Parr A, Jackson R, Ashford DA, Bowles DJ. Identification of glucosyltransferase genes involved in sinapate metabolism and lignin synthesis in Arabidopsis. J. Biol. Chem. 276: 4344-4349 (2001).
Lim HW, Park SS, Lim CJ. Purification and properties of phenylalanine ammonia-lyase from leaf mustard. Mol. Cells 7: 715-720 (1997).
Lim HW, Sa JH, Kim TS, Park EH, Park SS, Lim CJ. Purification and properties of phenylalanine ammonia-lyase from Chinese cabbage. J. Biochem. Mol. Biol. 31: 31-36 (1998).
Lin KC, Bushnell WR, Smith AG, Szabo LJ. Temporal accumulation patterns of defence response gene transcripts in relation to resistant reactions in oat inoculated with Puccinia graminis. Physiol. Mol. Plant Pathol. 52: 95-114 (1998).
Lindermayr C, Mollers B, Fliegmann J, Uhlmann A, Lottspeich F, Meimberg H, Ebel J. Divergent members of a soybean (Glycine max L.) 4-coumarate:coenzyme A ligase gene family. Eur. J. Biochem. 269: 1304-1315 (2002).
Liu H, Jensen KG, Tran LM, Chen M, Zhai L, Olsen CE, Sohoel H, Denmeade SR, Isaacs JT, Brogger Christensen S. Cytotoxic phenylpropanoids and an additional thapsigargin analogue isolated from Thapsia garganica. Phytochemistry 67: 2651-2658 (2006).
Lo SC, Nicholson RL. Reduction of light-induced anthocyanin accumulation in inoculated sorghum mesocotyls. Implications for a compensatory role in the defense response. Plant Physiol. 116: 979-989 (1998).
Loguercio LL, Zhang JQ, Wilkins TA. Differential regulation of six novel MYB-domain genes defines two distinct expression patterns in allotetraploid cotton (Gossypium hirsutum L.). Mol. Gen. Genet. 261: 660-671 (1999).
Lopes-Lutz D, Alviano DS, Alviano CS, Kolodziejczyk PP. Screening of chemical composition, antimicrobial and antioxidant activities of Artemisia essential oils. Phytochemistry 69: 1732-1738 (2008).
Lorenzen M, Racicot V, Strack D, Chapple C. Sinapic acid ester metabolism in wild type and a sinapoylglucose-accumulating mutant of Arabidopsis. Plant Physiol. 112: 1625-1630 (1996).
Lu S, Zhou Y, Li L, Chiang VL. Distinct roles of cinnamate 4-hydroxylase genes in Populus. Plant Cell Physiol. 47: 905-914 (2006).
Lunkenbein S, Salentijn EM, Coiner HA, Boone MJ, Krens FA, Schwab W. Up- and down-regulation of Fragariaxananassa O-methyltransferase: impacts on furanone and phenylpropanoid metabolism. J. Exp. Bot. 57: 2445-2453 (2006).
Ma QH, Tian B. Biochemical characterization of a cinnamoyl-CoA reductase from wheat. Biol. Chem. 386: 553-560 (2005).
Maeda K, Kimura S, Demura T, Takeda J, Ozeki Y. DcMYB1 acts as a transcriptional activator of the carrot phenylalanine ammonia-lyase gene (DcPAL1) in response to elicitor treatment, UV-B irradiation and the dilution effect. Plant Mol. Biol. 59: 739-752 (2005).
Mahroug S, Courdavault V, Thiersault M, St-Pierre B, Burlat V. Epidermis is a pivotal site of at least four secondary metabolic pathways in Catharanthus roseus aerial organs. Planta 223: 1191-1200 (2006).
Mase K, Sato K, Nakano Y, Nishikubo N, Tsuboi Y, Zhou J, Kitano H, Katayama Y. The ectopic expression of phenylalanine ammonia lyase with ectopic accumulation of polysaccharide-linked hydroxycinnamoyl esters in internode parenchyma of rice mutant Fukei 71. Plant Cell Rep. 24: 487-493 (2005).
Mathouet H, Elomri A, Lameiras P, Daich A, Verite P. An alkaloid, two conjugate sesquiterpenes and a phenylpropanoid from Pachypodanthium confine Engl. and Diels. Phytochemistry 68: 1813-1818 (2007).
Matros A, Amme S, Kettig B, Buck-Sorlin GH, Sonnewald U, Mock HP. Growth at elevated CO2 concentrations leads to modified profiles of secondary metabolites in tobacco cv. SamsunNN and to increased resistance against infection with potato virus Y. Plant Cell Environ. 29: 126-137 (2006).
Matsuda F, Morino K, Ano R, Kuzawa M, Wakasa K, Miyagawa H. Metabolic flux analysis of the phenylpropanoid pathway in elicitor-treated potato tuber tissue. Plant Cell Physiol. 46: 454-466 (2005).
Matsuda F, Morino K, Miyashita M, Miyagawa H. Metabolic flux analysis of the phenylpropanoid pathway in wound-healing potato tuber tissue using stable isotope-labeled tracer and LC-MS spectroscopy. Plant Cell Physiol. 44: 510-517 (2003).
Matt P, Krapp A, Haake V, Mock HP, Stitt M. Decreased Rubisco activity leads to dramatic changes of nitrate metabolism, amino acid metabolism and the levels of phenylpropanoids and nicotine in tobacco antisense RBCS transformants. Plant J. 30: 663-677 (2002).
Maury S, Geoffroy P, Legrand M. Tobacco O-methyltransferases involved in phenylpropanoid metabolism. The … Plant Physiol. 121: 215-224 (1999).
Mayer MJ, Narbad A, Parr AJ, Parker ML, Walton NJ, Mellon FA, Michael AJ. Rerouting the plant phenylpropanoid pathway by expression of a novel bacterial enoyl-CoA hydratase/lyase enzyme function. Plant Cell 13: 1669-1682 (2001).
Mazza CA, Boccalandro HE, Giordano CV, Battista D, Scopel AL, Ballare CL. Functional significance and induction by solar radiation of ultraviolet-absorbing sunscreens in field-grown soybean crops. Plant Physiol. 122: 117-126 (2000).
McInnis S, Clemens S, Kermode AR. The ornamental variety, Japanese striped corn, contains high anthocyanin levels and PAL specific activity: establishing the potential for development of an oral therapeutic. Plant Cell Rep. 28: 503-515 (2009).
McQualter RB, Chong BF, Meyer K, Van Dyk DE, O'Shea MG, Walton NJ, Viitanen PV, Brumbley SM. Initial evaluation of sugarcane as a production platform for p-hydroxybenzoic acid. Plant Biotechnol. J. 3: 29-41 (2005).
Medina-Holguín AL, Holguín FO, Micheletto S, Goehle S, Simon JA, O'Connell MA. Chemotypic variation of essential oils in the medicinal plant, Anemopsis californica. Phytochemistry 69: 919-927 (2008).
Mehrtens F, Kranz H, Bednarek P, Weisshaar B. The Arabidopsis transcription factor MYB12 is a flavonol-specific regulator of phenylpropanoid biosynthesis. Plant Physiol. 138: 1083-1096 (2005).
MeiBner D, Albert A, Bottcher C, Strack D, Milkowski C. The role of UDP-glucose:hydroxycinnamate glucosyltransferases in phenylpropanoid metabolism and the response to UV-B radiation in Arabidopsis thaliana. Planta 228: 663-674 (2008).
Meijer AH, Lopes Cardoso MI, Voskuilen JT, de Waal A, Verpoorte R, Hoge JH. Isolation and characterization of a cDNA clone from Catharanthus roseus encoding NADPH:cytochrome P-450 reductase, an enzyme essential for reactions catalysed by cytochrome P-450 mono-oxygenases in plants. Plant J. 4: 47-60 (1993).
Mellway RD, Tran LT, Prouse MB, Campbell MM, Constabel CP. The wound-, pathogen-, and ultraviolet B-responsive MYB134 gene encodes an R2R3 MYB transcription factor that regulates proanthocyanidin synthesis in poplar. Plant Physiol. 150: 924-941 (2009).
Memelink J. The use of genetics to dissect plant secondary pathways. Curr. Opin. Plant Biol. 8: 230-235 (2005).
Memelink J, Menkw FL, van der Fits L, Kijne JW. Chapter 6. Transcriptional Regulators to Modify Secondary Metabolism. In "Metabolic Engineering of Plant Secondary Metabolism" (Verpoorte R, Alfermann AW, eds), Kluwer Academic Publishers, Dortrecht, The Netherlands, pp. 111-125 (2000).
Merali Z, Mayer MJ, Parker ML, Michael AJ, Smith AC, Waldron KW. Metabolic diversion of the phenylpropanoid pathway causes cell wall and morphological changes in transgenic tobacco stems. Planta 225: 1165-1178 (2007).
Meyer K, Cusumano JC, Somerville C, Chapple CC. Ferulate-5-hydroxylase from Arabidopsis thaliana defines a new family of cytochrome P450-dependent monooxygenases. Proc. Natl. Acad. Sci. U.S.A. 93: 6869-6874 (1996).
Meyer K, Shirley AM, Cusumano JC, Bell-Lelong DA, Chapple C. Lignin monomer composition is determined by the expression of a cytochrome P450-dependent monooxygenase in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A. 95: 6619-6623 (1998).
Millar DJ, Long M, Donovan G, Fraser PD, Boudet AM, Danoun S, Bramley PM, Bolwell GP. Introduction of sense constructs of cinnamate 4-hydroxylase (CYP73A24) in transgenic tomato plants shows opposite effects on flux into stem lignin and fruit flavonoids. Phytochemistry 68: 1497-1509 (2007).
Mitra A, Mayer MJ, Mellon FA, Michael AJ, Narbad A, Parr AJ, Waldron KW, Walton NJ. 4-Hydroxycinnamoyl-CoA hydratase/lyase, an enzyme of phenylpropanoid cleavage from Pseudomonas, causes formation of C(6)-C(1) acid and alcohol glucose conjugates when expressed in hairy roots of Datura stramonium L. Planta 215: 79-89 (2002).
Moco S, Bino RJ, Vorst O, Verhoeven HA, de Groot J, van Beek TA, Vervoort J, de Vos CH. A liquid chromatography-mass spectrometry-based metabolome database for tomato. Plant Physiol. 141: 1205-1218 (2006).
Moffitt MC, Louie GV, Bowman ME, Pence J, Noel JP, Moore BS. Discovery of two cyanobacterial phenylalanine ammonia lyases: kinetic and structural characterization. Biochemistry 46: 1004-1012 (2007).
Mol J, Cornish E, Mason J, Koes R. Novel coloured flowers. Curr. Opin. Biotechnol. 10: 198-201 (1999).
Molas ML, Kiss JZ, Correll MJ. Gene profiling of the red light signalling pathways in roots. J. Exp. Bot. 57: 3217-3229 (2006).
Moller R, McDonald AG, Walter C, Harris PJ. Cell differentiation, secondary cell-wall formation and transformation of callus tissue of Pinus radiata D. Don. Planta 217: 736-747 (2003).
Mondolot L, LA Fisca P, Buatois B, Talansier E, DE Kochko A, Campa C. Evolution in caffeoylquinic acid content and histolocalization during Coffea canephora leaf development. Ann. Bot. (Lond.) 98: 33-40 (2006).
Morant M, Jorgensen K, Schaller H, Pinot F, Moller BL, Werck-Reichhart D, Bak S. CYP703 is an ancient cytochrome P450 in land plants catalyzing in-chain hydroxylation of lauric acid to provide building blocks for sporopollenin synthesis in pollen. Plant Cell 19: 1473-1487 (2007).
Moriwaki M, Yamakawa T, Washino T, Kodama T, Igarashi Y. Suppressed phenylalanine ammonia-lyase activity after heat shock in transgenic Nicotiana plumbaginifolia containing an Arabidopsis HSP18.2-parsley PAL2 chimera gene. J. Biosci. Bioeng. 87: 588-593 (1999).
Motose H, Iwamoto K, Endo S, Demura T, Sakagami Y, Matsubayashi Y, Moore KL, Fukuda H. Involvement of phytosulfokine in the attenuation of stress response during the transdifferentiation of Zinnia mesophyll cells into tracheary elements. Plant Physiol. 150: 437-447 (2009).
Moyano E, Martinez-Garcia JF, Martin C. Apparent redundancy in myb gene function provides gearing for the control of flavonoid biosynthesis in antirrhinum flowers. Plant Cell 8: 1519-1532 (1996).
Nair RB, Bastress KL, Ruegger MO, Denault JW, Chapple C. The Arabidopsis thaliana reduced epidermal fluorescence1 gene encodes an aldehyde dehydrogenase involved in ferulic acid and sinapic acid biosynthesis. Plant Cell 16: 544-554 (2004).
Nair RB, Joy RW IV, Kurylo E, Shi X, Schnaider J, Datla RS, Keller WA, Selvaraj G. Identification of a CYP84 family of cytochrome P450-dependent mono-oxygenase genes in Brassica napus and perturbation of their expression for engineering sinapine reduction in the seeds. Plant Physiol. 123: 1623-1634 (2000).
Nair RB, Xia Q, Kartha CJ, Kurylo E, Hirji RN, Datla R, Selvaraj G. Arabidopsis CYP98A3 mediating aromatic 3-hydroxylation. Developmental regulation of the gene, and expression in yeast. Plant Physiol. 130: 210-220 (2002).
Narasimhan K, Basheer C, Bajic VB, Swarup S. Enhancement of plant-microbe interactions using a rhizosphere metabolomics-driven approach and its application in the removal of polychlorinated biphenyls. Plant Physiol. 132: 146-153 (2003).
Negrel J, Javelle F. Induction of phenylpropanoid and tyramine metabolism in pectinase- or pronase-elicited cell suspension cultures of tobacco (Nicotiana tabacum). Physiol. Plant. 95: 569-574 (1995).
Neustaedter DA, Lee SP, Douglas CJ. A novel parsley 4CL1 cis-element is required for developmentally regulated expression and protein-DNA complex formation. Plant J. 18: 77-88 (1999).
Ni W, Sewalt V, Korth KL, Blount JW, Ballance GM, Dixon RA. Stress responses in alfalfa. XXI Activation of caffeic acid 3-O-methyltransferase and caffeoyl coenzyme A 3-O-methyltransferase genes does not contribute to changes in metabolite accumulation in elicitor-treated cell-suspension cultures. Plant Physiol. 112: 717-726 (1996).
Nielsen ME, Lok F, Nielsen HB. Distinct developmental defense activations in barley embryos identified by transcriptome profiling. Plant Mol. Biol. 61: 589-601 (2006).
Noel JP, Austin MB, Bomati EK. Structure-function relationships in plant phenylpropanoid biosynthesis. Curr. Opin. Plant Biol. 8: 249-253 (2005).
Orr JD, Edwards R, Dixon RA. Stress responses in alfalfa (Medicago sativa L.) XIV. Changes in the levels of phenylpropanoid pathway intermediates in relation to regulation of L-phenylalanine ammonia-lyase in elicitor-treated cell-suspension cultures. Plant Physiol. 101: 847-856 (1993).
Orr JD, Sumner LW, Edwards R, Dixon RA. Determination of cinnamic acid and 4-coumaric acid in alfalafa (Medicago sativa L.) cell suspension cultures by gas chromatography. Phytochem. Anal. 4: 124-130 (1993).
Ounaroon A, Decker G, Schmidt J, Lottspeich F, Kutchan TM. (R,S)-Reticuline 7-O-methyltransferase and (R,S)-norcoclaurine 6-O-methyltransferase of Papaver somniferum - cDNA cloning and characterization of methyl transfer enzymes of alkaloid biosynthesis in opium poppy. Plant J. 36: 808-819 (2003).
Pan H, Wang Y, Zhang Y, Zhou T, Fang C, Nan P, Wang X, Li X, Wei Y, Chen J. Phenylalanine ammonia lyase functions as a switch directly controlling the accumulation of calycosin and calycosin-7-O-{beta}-D-glucoside in Astragalus membranaceus var. mongholicus plants. J. Exp. Bot. 59: 3027-3037 (2008).
Pan Y, Michael TP, Hudson ME, Kay SA, Chory J, Schuler MA. Cytochrome P450 monooxygenases as reporters for circadian-regulated pathways. Plant Physiol. 150: 858-878 (2009).
Pandey SP, Baldwin IT. Silencing RNA-directed RNA polymerase 2 increases the susceptibility of Nicotiana attenuata to UV in the field and in the glasshouse. Plant J. 54: 845-862 (2008).
Paolacci AR, D'Ovidio R, Marabottini R, Nali C, Lorenzini G, Abenavoli MR, Badiani M. Ozone induces a differential accumulation of phenyalanine ammonia-lyase, chalcone synthase and chalcone isomerase RNA transcripts in sensitive and resistant bean cultivars. Aust. J. Plant Physiol. 28: 425-428 (2001).
Parker D, Beckmann M, Zubair H, Enot DP, Caracuel-Rios Z, Overy DP, Snowdon S, Talbot NJ, Draper J. Metabolomic analysis reveals a common pattern of metabolic re-programming during invasion of three host plant species by Magnaporthe grisea. Plant J. 59: 723-737 (2009).
Pedras MS, Zheng QA, Gadagi RS, Rimmer SR. Phytoalexins and polar metabolites from the oilseeds canola and rapeseed: differential metabolic responses to the biotroph Albugo candida and to abiotic stress. Phytochemistry 69: 894-910 (2008).
Peng M, Bi YM, Zhu T, Rothstein SJ. Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. Plant Mol. Biol. 65: 775-797 (2007).
Peng M, Hudson D, Schofield A, Tsao R, Yang R, Gu H, Bi YM, Rothstein SJ. Adaptation of Arabidopsis to nitrogen limitation involves induction of anthocyanin synthesis which is controlled by the NLA gene. J. Exp. Bot. 59: 2933-2944 (2008).
Peters DJ, Constabel CP. Molecular analysis of herbivore-induced condensed tannin synthesis: cloning and expression of dihydroflavonol reductase from trembling aspen (Populus tremuloides). Plant J. 32: 701-712 (2002).
Petit AN, Baillieul F, Vaillant-Gaveau N, Jacquens L, Conreux A, Jeandet P, Clement C, Fontaine F. Low responsiveness of grapevine flowers and berries at fruit set to UV-C irradiation. J. Exp. Bot. 60: 1155-1162 (2009).
Petit AN, Wojnarowiez G, Panon ML, Baillieul F, Clement C, Fontaine F, Vaillant-Gaveau N. Botryticides affect grapevine leaf photosynthesis without inducing defense mechanisms. Planta 229: 497-506 (2009).
Pflugmacher S, Schroder P, Sandermann H. Taxonomic distribution of plant glutathione S-transferases acting on xenobiotics. Phytochemistry 54: 267-273 (2000).
Pichersky E, Dudareva N. Scent engineering: toward the goal of controlling how flowers smell. Trends Biotechnol. 25: 105-110 (2007).
Pichersky E, Gang DR. Genetics and biochemistry of secondary metabolites in plants: an evolutionary perspective. Trends Plant Sci. 5: 439-445 (2000).
Piquemal J, Lapierre C, Myton K, O'Connell A, Schuch W, Grima-Pettenati J, Boudet AM. Down-regulation of cinnamoyl-CoA reductase induces significant changes of lignin profiles in transgenic tobacco plants. Plant J. 13: 71-83 (1998).
Preston J, Wheeler J, Heazlewood J, Li SF, Parish RW. AtMYB32 is required for normal pollen development in Arabidopsis thaliana. Plant J. 40: 979-995 (2004).
Raguso RA, Schlumpberger BO, Kaczorowski RL, Holtsford TP. Phylogenetic fragrance patterns in Nicotiana sections Alatae and Suaveolentes. Phytochemistry 67: 1931-1942 (2006).
Rajasekhar VK, Lamb C, Dixon RA. Early events in the signal pathway for the oxidative burst in soybean cells exposed to avirulent Pseudomonas syringae pv glycinea. Plant Physiol. 120: 1137-1146 (1999).
Ralston L, Subramanian S, Matsuno M, Yu O. Partial reconstruction of flavonoid and isoflavonoid biosynthesis in yeast using soybean type I and type II chalcone isomerases. Plant Physiol. 137: 1375-1388 (2005).
Ramirez-Ahumada MD, Timmermann BN, Gang DR. Biosynthesis of curcuminoids and gingerols in turmeric (Curcuma longa) and ginger (Zingiber officinale): identification of curcuminoid synthase and hydroxycinnamoyl-CoA thioesterases. Phytochemistry 67: 2017-2029 (2006).
Ramos CS, Vanin SA, Kato MJ. Metabolism of (-)-grandisin from Piper solmsianum in Coleoptera and Lepidoptera species. Phytochemistry 69: 2157-2161 (2008).
Ramos RLB, Tovar FJ, Junqueira RM, Lino FB, Sachetto-Martins G. Sugarcane expressed sequences tags (ESTs) encoding enzymes involved in lignin biosynthesis pathways. Genet. Mol. Biol. 24: 235-241 (2001).
Ranjan P, Kao YY, Jiang H, Joshi CP, Harding SA, Tsai CJ. Suppression subtractive hybridization-mediated transcriptome analysis from multiple tissues of aspen (Populus tremuloides) altered in phenylpropanoid metabolism. Planta 219: 694-704 (2004).
Rao SR, Ravishankar GA. Biotransformation of protocatechuic aldehyde and caffeic acid to vanillin and capsaicin in freely suspended and immobilized cell cultures of Capsicum frutescens. J. Biotechnol. 76: 137-146 (2000).
Rasmussen S, Dixon RA. Transgene-mediated and elicitor-induced perturbation of metabolic channeling at the entry point into the phenylpropanoid pathway. Plant Cell 11: 1537-1552 (1999).
Razal RA, Ellis S, Singh S, Lewis NG, Towers GHN. Nitrogen recycling in phenylpropanoid metabolism. Phytochemistry 41: 31-35 (1996).
Reddy JT, Korth KL, Wesley SV, Howles PA, Rasmussen S, Lamb C, Dixon RA. Post-transcriptional regulation of phenylalanine ammonia-lyase expression in tobacco following recovery from gene silencing. Biol. Chem. 381: 655-665 (2000).
Reinold S, Hauffe KD, Douglas CJ. Tobacco and parsley 4-coumarate:coenzyme A ligase genes are temporally and spatially regulated in a cell type-specific manner during tobacco flower development. Plant Physiol. 101: 373-383 (1993).
Rhodes D, Peel GJ, Dudareva N. Metabolism, secondary: engineering pathways of. In (RM Goodman, ed) Encyclopedia of Plant and Crop Science, Marcell Dekker, N.Y., pp. 720-723 (2004).
Ribnicky DM, Shulaev V, Raskin I. Intermediates of salicylic acid biosynthesis in tobacco. Plant Physiol. 118: 565-572 (1998).
Rippert P, Scimemi C, Dubald M, Matringe M. Engineering plant shikimate pathway for production of tocotrienol and improving herbicide resistance. Plant Physiol. 134: 92-100 (2004).
Ritter H, Schulz GE. Structural basis for the entrance into the phenylpropanoid metabolism catalyzed by phenylalanine ammonia-lyase. Plant Cell 16: 3426-3436 (2004).
Ro DK, Mah N, Ellis BE, Douglas CJ. Functional characterization and subcellular localization of poplar (Populus trichocarpa x Populus deltoides) cinnamate 4-hydroxylase. Plant Physiol. 126: 317-329 (2001).
Robinson AR, Gheneim R, Kozak RA, Ellis DD, Mansfield SD. The potential of metabolite profiling as a selection tool for genotype discrimination in Populus. J. Exp. Bot. 56: 2807-2819 (2005).
Rohde A, Morreel K, Ralph J, Goeminne G, Hostyn V, De Rycke R, Kushnir S, Van Doorsselaere J, Joseleau JP, Vuylsteke M, Van Driessche G, Van Beeumen J, Messens E, Boerjan W. Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism. Plant Cell 16: 2749-2771 (2004).
Ruegger M, Meyer K, Cusumano JC, Chapple C. Regulation of ferulate-5-hydroxylase expression in Arabidopsis in the context of sinapate ester biosynthesis. Plant Physiol. 119: 101-110 (1999).
Ryder TB, Hedrick SA, Bell JN, Liang XW, Clouse SD, Lamb CJ. Organization and differential activation of a gene family encoding the plant defense enzyme chalcone synthase in Phaseolus vulgaris. Mol. Gen. Genet. 210: 219-233 (1987).
Sablowski RW, Moyano E, Culianez-Macia FA, Schuch W, Martin C, Bevan M. A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes. EMBO J. 13: 128-137 (1994).
Sagasser M, Lu GH, Hahlbrock K, Weisshaar B. A. thaliana TRANSPARENT TESTA 1 is involved in seed coat development and defines the WIP subfamily of plant zinc finger proteins. Genes Dev. 16: 138-149 (2002).
Saltveit ME, Choi YJ, Tomas-Barberan FA. Mono-carboxylic acids and their salts inhibit wound-induced phenolic accumulation in excised lettuce (Lactuca sativa) leaf tissue. Physiol. Plant. 125: 454-463 (2005).
Saltveit ME, Choi YJ, Tomas-Barberan FA. Involvement of components of the phospholipid-signaling pathway in wound-induced phenylpropanoid metabolism in lettuce (Lactuca sativa) leaf tissue. Physiol. Plant. 125: 345-355 (2005).
Salzman RA, Brady JA, Finlayson SA, Buchanan CD, Summer EJ, Sun F, Klein PE, Klein RR, Pratt LH, Cordonnier-Pratt MM, Mullet JE. Transcriptional profiling of sorghum induced by methyl jasmonate, salicylic acid, and aminocyclopropane carboxylic acid reveals cooperative regulation and novel gene responses. Plant Physiol. 138: 352-368 (2005).
Saouf A, Guerra FM, Rubal JJ, Jorge ZD, Akssira M, Mellouki F, Moreno-Dorado FJ, Massanet GM. Phenylpropanoids from Thapsia transtagana. Phytochemistry 67: 800-804 (2006).
Sarma AD, Sreelakshmi Y, Sharma R. Differential expression and properties of phenylalanine ammonia-lyase isoforms in tomato leaves. Phytochemistry 49: 2233-2243 (1998).
Sattler SE, Saathoff AJ, Haas EJ, Palmer NA, Funnell-Harris DL, Sarath G, Pedersen JF. A nonsense mutation in a cinnamyl alcohol dehydrogenase gene is responsible for the Sorghum brown midrib6 phenotype. Plant Physiol. 150: 584-595 (2009).
Schalk M, Batard Y, Seyer A, Nedelkina S, Durst F, Werck-Reichhart D. Design of fluorescent substrates and potent inhibitors of CYP73As, P450s that catalyze 4-hydroxylation of cinnamic acid in higher plants. Biochemistry 36: 15253-15261 (1997).
Schalk M, Cabello-Hurtado F, Pierrel MA, Atanossova R, Saindrenan P, Werck-Reichhart D. Piperonylic acid, a selective, mechanism-based inactivator of the trans-cinnamate 4-hydroxylase: A new tool to control the flux of metabolites in the phenylpropanoid pathway. Plant Physiol. 118: 209-218 (1998).
Schmidt HL, Werner RA, Eisenreich W, Fuganti C, Fronza G, Remaud G, Robins RJ. The prediction of isotopic patterns in phenylpropanoids from their precursors and the mechanism of the NIH-shift: basis of the isotopic characteristics of natural aromatic compounds. Phytochemistry 67: 1094-1103 (2006).
Schmitt B, Schneider B. Phenylpropanoid interconversion in Anigozanthos preissii observed by high-performance liquid chromatography-nuclear magnetic resonance spectroscopy. Phytochem. Anal. 12: 43-47 (2001).
Schoch G, Goepfert S, Morant M, Hehn A, Meyer D, Ullmann P, Werck-Reichhart D. CYP98A3 from Arabidopsis thaliana is a 3'-hydroxylase of phenolic esters, a missing link in the phenylpropanoid pathway. J. Biol. Chem. 276: 36566-36574 (2001).
Schoch GA, Nikov GN, Alworth WL, Werck-Reichhart D. Chemical inactivation of the cinnamate 4-hydroxylase allows for the accumulation of salicylic acid in elicited cells. Plant Physiol. 130: 1022-1031 (2002).
Schoenbohm C, Martens S, Eder C, Forkmann G, Weisshaar B. Identification of the Arabidopsis thaliana flavonoid 3'-hydroxylase gene and functional expression of the encoded P450 enzyme. Biol. Chem. 381: 749-753 (2000).
Seguin J, Muzac I, Ibrahim RK. Purification and immunological characterization of a recombinant trimethylflavonol 3'-O-methyltransferase. Phytochemistry 49: 319-325 (1998).
Seshime Y, Juvvadi PR, Fujii I, Kitamoto K. Genomic evidences for the existence of a phenylpropanoid metabolic pathway in Aspergillus oryzae. Biochem. Biophys. Res. Commun. 337: 747-751 (2005).
Sewalt VJH, Ni WT, Blount JW, Jung HG, Masoud SA, Howles PA, Lamb C, Dixon RA. Reduced lignin content and altered lignin composition in transgenic tobacco down-regulated in expression of L-phenylalanine ammonia-lyase or cinnamate 4-hydroxylase. Plant Physiol. 115: 41-50 (1997).
Shadle GL, Wesley SV, Korth KL, Chen F, Lamb C, Dixon RA. Phenylpropanoid compounds and disease resistance in transgenic tobacco with altered expression of L-phenylalanine ammonia-lyase. Phytochemistry 64: 153-161 (2003).
Shelton D, Leach D, Baverstock P, Henry R. Isolation of genes involved in secondary metabolism from Melaleuca alternifolia (Cheel) using expressed sequence tags (ESTs). Plant Sci. 162: 9-15 (2002).
Shinya T, Galis I, Narisawa T, Sasaki M, Fukuda H, Matsuoka H, Saito M, Matsuoka K. Comprehensive analysis of glucan elicitor-regulated gene expression in tobacco BY-2 cells reveals a novel MYB transcription factor involved in the regulation of phenylpropanoid metabolism. Plant Cell Physiol. 48: 1404-1413 (2007).
Shirley AM, McMichael CM, Chapple C. The sng2 mutant of Arabidopsis is defective in the gene encoding the serine carboxypeptidase-like protein sinapoylglucose:choline sinapoyltransferase. Plant J. 28: 83-94 (2001).
Sibout R, Eudes A, Pollet B, Goujon T, Mila I, Granier F, Seguin A, Lapierre C, Jouanin L. Expression pattern of two paralogs encoding cinnamyl alcohol dehydrogenases in Arabidopsis. Isolation and characterization of the corresponding mutants. Plant Physiol. 132: 848-860 (2003).
Siebert M, Sommer S, Li SM, Wang ZX, Severin K, Heide L. Genetic engineering of plant secondary metabolism. Accumulation of 4-hydroxybenzoate glucosides as a result of the expression of the bacterial ubiC gene in tobacco. Plant Physiol. 112: 811-819 (1996).
Silber MV, Meimberg H, Ebel J. Identification of a 4-coumarate:CoA ligase gene family in the moss, Physcomitrella patens. Phytochemistry 69: 2449-2456 (2008).
Singh S, Lewis NG, Towers GH. Nitrogen recycling during phenylpropanoid metabolism in sweet potato tubers. J. Plant Physiol. 153: 316-323 (1998).
Sircar D, Mitra A. Accumulation of p-hydroxybenzoic acid in hairy roots of Daucus carota 2: confirming biosynthetic steps through feeding of inhibitors and precursors. J. Plant Physiol. 166: 1370-1380 (2009).
Sircar D, Mitra A. Evidence for p-hydroxybenzoate formation involving enzymatic phenylpropanoid side-chain cleavage in hairy roots of Daucus carota. J. Plant Physiol. 165: 407-414 (2008).
Soltani BM, Ehlting J, Hamberger B, Douglas CJ. Multiple cis-regulatory elements regulate distinct and complex patterns of developmental and wound-induced expression of Arabidopsis thaliana 4CL gene family members. Planta 224: 1226-1238 (2006).
Sonbol FM, Fornale S, Capellades M, Encina A, Tourino S, Torres JL, Rovira P, Ruel K, Puigdomenech P, Rigau J, Caparros-Ruiz D. The maize ZmMYB42 represses the phenylpropanoid pathway and affects the cell wall structure, composition and degradability in Arabidopsis thaliana. Plant Mol. Biol. 70: 283-296 (2009).
Spitzer B, Zvi MM, Ovadis M, Marhevka E, Barkai O, Edelbaum O, Marton I, Masci T, Alon M, Morin S, Rogachev I, Aharoni A, Vainstein A. Reverse genetics of floral scent: application of tobacco rattle virus-based gene silencing in Petunia. Plant Physiol. 145: 1241-1250 (2007).
Sreevidya V, Srinivasa Rao C, Sullia S, Ladha JK, Reddy PM. Metabolic engineering of rice with soybean isoflavone synthase for promoting nodulation gene expression in rhizobia. J. Exp. Bot. 57: 1957-1969 (2006).
Stitt M, Muller C, Matt P, Gibon Y, Carillo P, Morcuende R, Scheible WR, Krapp A. Steps towards an integrated view of nitrogen metabolism. J. Exp. Bot. 53: 959-970 (2002).
Subramanian S, Hu X, Lu G, Odelland JT, Yu O. The promoters of two isoflavone synthase genes respond differentially to nodulation and defense signals in transgenic soybean roots. Plant Mol. Biol. 54: 623-639 (2004).
Suzuki H, Reddy MS, Naoumkina M, Aziz N, May GD, Huhman DV, Sumner LW, Blount JW, Mendes P, Dixon RA. Methyl jasmonate and yeast elicitor induce differential transcriptional and metabolic re-programming in cell suspension cultures of the model legume Medicago truncatula. Planta 220: 696-707 (2005).
Takahama U. Ascorbic acid-dependent regulation of redox levels of chlorogenic acid and its isomers in the apoplast of leaves of Nicotiana tabacum L. Plant Cell Physiol. 39: 681-689 (1998).
Takahama U, Hirotsu M, Oniki T. Age-dependent changes in levels of ascorbic acid and chlorogenic acid, and activities of peroxidase and superoxide dismutase in the apoplast of tobacco leaves: Mechanism of the oxidation of chlorogenic acid in the apoplast. Plant Cell Physiol. 40: 716-724 (1999).
Takahama U, Oniki T. A peroxidase/phenolics/ascorbate system can scavenge hydrogen peroxide in plant cells. Physiol. Plant. 101: 845-852 (1997).
Tamagnone L, Merida A, Parr A, Mackay S, Culianez-Macia FA, Roberts K, Martin C. The AmMYB308 and AmMYB330 transcription factors from Antirrhinum regulate phenylpropanoid and lignin biosynthesis in transgenic tobacco. Plant Cell 10: 135-154 (1998).
Tan J, Bednarek P, Liu J, Schneider B, Svatos A, Hahlbrock K. Universally occurring phenylpropanoid and species-specific indolic metabolites in infected and uninfected Arabidopsis thaliana roots and leaves. Phytochemistry 65: 691-699 (2004).
Tan KH, Tan LT, Nishida R. Floral phenylpropanoid cocktail and architecture of Bulbophyllum vinaceum orchid in attracting fruit flies for pollination. J. Chem. Ecol. 32: 2429-2441 (2006).
Temple SJ, Vance CP, Gantt JS. Glutamate synthase and nitrogen assimilation. Trends Plant Sci. 3: 51-56 (1998).
Thoma S, Hecht U, Kippers A, Botella J, De Vries S, Somerville C. Tissue-specific expression of a gene encoding a cell wall-localized lipid transfer protein from Arabidopsis. Plant Physiol. 105: 35-45 (1994).
Thulke O, Conrath U. Salicylic acid has a dual role in the activation of defence-related genes in parsley. Plant J. 14: 35-42 (1998).
Tian L, Blount JW, Dixon RA. Phenylpropanoid glycosyltransferases from osage orange (Maclura pomifera) fruit. FEBS Lett. 580: 6915-6920 (2006).
Toquin V, Grausem B, Geoffroy P, Legrand M. Structure of the tobacco caffeic acid O-methyltransferase (COMT) II gene: identification of promoter sequences involved in gene inducibility by various stimuli. Plant Mol. Biol. 52: 495-509 (2003).
Trognitz F, Manosalva P, Gysin R, Nino-Liu D, Simon R, Herrera MD, Trognitz B, Ghislain M, Nelson R. Plant defense genes associated with quantitative resistance to potato late blight in Solanum phureja x dihaploid S. tuberosum hybrids. Mol. Plant Microbe Interact. 15: 587-597 (2002).
Truman W, de Zabala MT, Grant M. Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance. Plant J. 46: 14-33 (2006).
Uimari A, Strommer J. Myb26: a MYB-like protein of pea flowers with affinity for promoters of phenylpropanoid genes. Plant J. 12: 1273-1284 (1997).
Unterlinner B, Lenz R, Kutchan TM. Molecular cloning and functional expression of codeinone reductase: the penultimate enzyme in morphine biosynthesis in the opium poppy Papaver somniferum. Plant J. 18: 465-475 (1999).
Urbanczyk-Wochniak E, Usadel B, Thimm O, Nunes-Nesi A, Carrari F, Davy M, Blasing O, Kowalczyk M, Weicht D, Polinceusz A, Meyer S, Stitt M, Fernie AR. Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Mol. Biol. 60: 773-792 (2006).
Vaknin H, Bar-Akiva A, Ovadia R, Nissim-Levi A, Forer I, Weiss D, Oren-Shamir M. Active anthocyanin degradation in Brunfelsia calycina (yesterday-today-tomorrow) flowers. Planta 222: 19-26 (2005).
van der Rest B, Danoun S, Boudet AM, Rochange SF. Down-regulation of cinnamoyl-CoA reductase in tomato (Solanum lycopersicum L.) induces dramatic changes in soluble phenolic pools. J. Exp. Bot. 57: 1399-1411 (2006).
Van Moerkercke A, Schauvinhold I, Pichersky E, Haring MA, Schuurink RC. A plant thiolase involved in benzoic acid biosynthesis and volatile benzenoid production. Plant J. Jun 15 [Epub ahead of print] (2009).
Vander Mijnsbrugge K, Beeckman H, De Rycke R, Van Montagu M, Engler G, Boerjan W. Phenylcoumaran benzylic ether reductase, a prominent poplar xylem protein, is strongly associated with phenylpropanoid biosynthesis in lignifying cells. Planta 211: 502-509 (2000).
Vander Mijnsbrugge K, Meyermans H, Van Montagu M, Bauw G, Boerjan W. Wood formation in poplar: identification, characterization, and seasonal variation of xylem proteins. Planta 210: 589-598 (2000).
Vogt T. Regiospecificity and kinetic properties of a plant natural product O-methyltransferase are determined by its N-terminal domain. FEBS Lett. 561: 159-162 (2004).
Voll LM, Allaire EE, Fiene G, Weber AP. The Arabidopsis phenylalanine insensitive growth mutant exhibits a deregulated amino acid metabolism. Plant Physiol. 136: 3058-3069 (2004).
Vom Endt D, Kijne JW, Memelink J. Transcription factors controlling plant secondary metabolism: what regulates the regulators? Phytochemistry 61: 107-114 (2002).
Voo KS, Whetten RW, O'Malley DM, Sederoff RR. 4-Coumarate:coenzyme A ligase from loblolly pine xylem. Isolation, characterization, and complementary DNA cloning. Plant Physiol. 108: 85-97 (1995).
Wagner A, Ralph J, Akiyama T, Flint H, Phillips L, Torr K, Nanayakkara B, Te Kiri L. Exploring lignification in conifers by silencing hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyltransferase in Pinus radiata. Proc. Natl. Acad. Sci. U.S.A. 104: 11856-11861 (2007).
Wakabayashi K, Hoson T, Kamisaka S. Osmotic stress suppresses cell wall stiffening and the increase in cell wall-bound ferulic and diferulic acids in wheat coleoptiles. Plant Physiol. 113: 967-973 (1997).
Walczak HA, Dean JV. Vacuolar transport of the glutathione conjugate of trans-cinnamic acid. Phytochemistry 53: 441-446 (2000).
Walczak HA, Dean JV. Vacuolar transport of the glutathione conjugate of trans-cinnamic acid. Phytochemistry 53: 441-446 (2000).
Walter MH, Grima-Pettenati J, Grand C, Boudet AM, Lamb CJ. Cinnamyl-alcohol dehydrogenase, a molecular marker specific for lignin synthesis: cDNA cloning and mRNA induction by fungal elicitor. Proc. Natl. Acad. Sci. U.S.A. 85: 5546-5550 (1988).
Wang AM, Xia Q, Xie WS, Dumonceaux T, Zou JT, Datla R, Selvaraj G. Male gametophyte development in bread wheat (Triticum aestivum L.): molecular, cellular, and biochemical analyses of a sporophytic contribution to pollen wall ontogeny. Plant J. 30: 613-623 (2002).
Wang J, Dudareva N, Bhakta S, Raguso RA, Pichersky E. Floral scent production in Clarkia breweri (Onagraceae). II. Localization and developmental modulation of the enzyme S-adenosyl-L-methionine:(iso)eugenol O-methyltransferase and phenylpropanoid emission. Plant Physiol. 114: 213-221 (1997).
Wang P, Li S, Ownby S, Zhang Z, Yuan W, Zhang W, Scott Beasley R. Ecdysteroids and a sucrose phenylpropanoid ester from Froelichia floridana. Phytochemistry 70: 430-436 (2009).
Warpeha KM, Gibbons J, Carol A, Slusser J, Tree R, Durham W, Kaufman LS. Adequate phenylalanine synthesis mediated by G-protein is critical for protection from UV radiation damage in young etiolated Arabidopsis thaliana seedlings. Plant Cell Environ. 31: 1756-1770 (2008).
Weisshaar B, Jenkins GI. Phenylpropanoid biosynthesis and its regulation. Curr. Opin. Plant Biol. 1: 251-257 (1998).
Wen PF, Chen JY, Kong WF, Pan QH, Wan SB, Huang WD. Salicylic acid induced the expression of phenylalanine ammonia-lyase gene in grape berry. Plant Sci. 169: 928-934 (2005).
Werck-Reichhart D. Cytochromes P450 in phenylpropanoid metabolism. Drug Metabol. Drug Interact. 12: 221-243 (1995).
Whitbred JM, Schuler MA. Molecular characterization of CYP73A9 and CYP82A1 P450 genes involved in plant defense in pea. Plant Physiol. 124: 47-58 (2000).
Wilkins O, Nahal H, Foong J, Provart NJ, Campbell MM. Expansion and diversification of the Populus R2R3-MYB family of transcription factors. Plant Physiol. 149: 981-993 (2009).
Winkel BS. Metabolic channeling in plants. Annu. Rev. Plant Biol. 55: 85-107 (2004).
Winkel-Shirley B. Evidence for enzyme complexes in the phenylpropanoid and flavonoid pathways. Physiol. Plant. 107: 142-149 (1999).
Wisman E, Hartmann U, Sagasser M, Baumann E, Palme K, Hahlbrock K, Saedler H, Weisshaar B. Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes. Proc. Natl. Acad. Sci. U.S.A. 95: 12432-12437 (1998).
Wright GA, Lutmerding A, Dudareva N, Smith BH. Intensity and the ratios of compounds in the scent of snapdragon flowers affect scent discrimination by honeybees (Apis mellifera). J. Comp. Physiol. A. Neuroethol. Sens. Neural. Behav. Physiol. 191: 105-114 (2005).
Wuyts N, Lognay G, Swennen R, De Waele D. Nematode infection and reproduction in transgenic and mutant Arabidopsis and tobacco with an altered phenylpropanoid metabolism. J. Exp. Bot. 57: 2825-2835 (2006).
Xie Z, Kapteyn J, Gang DR. A systems biology investigation of the MEP/terpenoid and shikimate/phenylpropanoid pathways points to multiple levels of metabolic control in sweet basil glandular trichomes. Plant J. 54: 349-361 (2008).
Yang S, Sweetman JP, Amirsadeghi S, Barghchi M, Huttly AK, Chung WI, Twell D. Novel anther-specific myb genes from tobacco as putative regulators of phenylalanine ammonia-lyase expression. Plant Physiol. 126: 1738-1753 (2001).
Yao K, De Luca V, Brisson N. Creation of a metabolic sink for tryptophan alters the phenylpropanoid pathway and the susceptibility of potato to Phytophthora infestans. Plant Cell 7: 1787-1799 (1995).
Ye Z, Zhong R, Morrison WH 3rd, Himmelsbach DS. Caffeoyl coenzyme A O-methyltransferase and lignin biosynthesis. Phytochemistry 57: 1177-1185 (2001).
Yoshihara N, Fukuchi-Mizutani M, Okuhara H, Tanaka Y, Yabuya T. Molecular cloning and characterization of O-methyltransferases from the flower buds of Iris hollandica. J. Plant Physiol. 165: 415-422 (2008).
Yu CK, Springob K, Schmidt J, Nicholson RL, Chu IK, Yip WK, Lo C. A stilbene synthase gene (SbSTS1) is involved in host and nonhost defense responses in sorghum. Plant Physiol. 138: 393-401 (2005).
Yu O, Jez JM. Nature's assembly line: biosynthesis of simple phenylpropanoids and polyketides. Plant J. 54: 750-762 (2008).
Zeier J, Delledonne M, Mishina T, Severi E, Sonoda M, Lamb C. Genetic elucidation of nitric oxide signaling in incompatible plant-pathogen interactions. Plant Physiol. 136: 2875-2886 (2004).
Zhang L, Liao CC, Huang HC, Shen YC, Yang LM, Kuo YH. Antioxidant phenylpropanoid glycosides from Smilax bracteata. Phytochemistry 69: 1398-1404 (2008).
Zhang L, Robbins MP, Carver TLW, Zeyen RJ. Induction of phenylpropanoid gene transcripts in oat attacked by Erysiphe graminis at 20 degrees C and 10 degrees C. Physiol. Mol. Plant Pathol. 51: 15-33 (1997).
Zhang P, Wang Y, Zhang J, Maddock S, Snook M, Peterson T. A maize QTL for silk maysin levels contains duplicated Myb-homologous genes which jointly regulate flavone biosynthesis. Plant Mol. Biol. 52: 1-15 (2003).
Zhou J, Lee C, Zhong R, Ye ZH. MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis. Plant Cell 21: 248-266 (2009).
Number of references = 402
| PubMed Search | Entrez Protein Search | ISI Web of Knowledge Search | Scirus Search |
|