Baroja-Fernandez E, Munoz FJ, Akazawa T, Pozueta-Romero J. Reappraisal of the currently prevailing model of starch biosynthesis in photosynthetic tissues: a proposal involving the cytosolic production of ADP-glucose by sucrose synthase and occurrence of cyclic turnover of starch in the chloroplast. Plant Cell Physiol. 42: 1311-1320 (2001).

Baroja-Fernandez E, Munoz FJ, Akazawa T, Pozueta-Romero J. Reappraisal of the currently prevailing model of starch biosynthesis in photosynthetic tissues: a proposal involving the cytosolic production of ADP-glucose by sucrose synthase and occurrence of cyclic turnover of starch in the chloroplast. Plant Cell Physiol. 42: 1311-1320 (2001).

Blasing OE, Gibon Y, Gunther M, Hohne M, Morcuende R, Osuna D, Thimm O, Usadel B, Scheible WR, Stitt M. Sugars and circadian regulation make major contributions to the global regulation of diurnal gene expression in Arabidopsis. Plant Cell 17: 3257-3281 (2005).

Brautaset T, Petersen S, Valla S. An experimental study on carbon flow in Escherichia coli as a function of kinetic properties and expression levels of the enzyme phosphoglucomutase. Biotechnol. Bioeng. 58: 299-302 (1998).

Brautaset T, Petersen SB, Valla S. In vitro determined kinetic properties of mutant phosphoglucomutases and their effects on sugar catabolism in Escherichia coli. Metab. Eng. 2: 104-114 (2000).

Bro C, Knudsen S, Regenberg B, Olsson L, Nielsen J. Improvement of galactose uptake in Saccharomyces cerevisiae through overexpression of phosphoglucomutase: example of transcript analysis as a tool in inverse metabolic engineering. Appl. Environ. Microbiol. 71: 6465-6472 (2005).

Davies EJ, Tetlow IJ, Bowsher CG, Emes MJ. Molecular and biochemical characterization of cytosolic phosphoglucomutase in wheat endosperm (Triticum aestivum L. cv. Axona). J. Exp. Bot. 54: 1351-1360 (2003).

Desvaux M, Guedon E, Petitdemange H. Carbon flux distribution and kinetics of cellulose fermentation in steady-state continuous cultures of Clostridium cellulolyticum on a chemically defined medium. J. Bacteriol. 183: 119-130 (2001).

Desvaux M, Petitdemange H. Flux analysis of the metabolism of Clostridium cellulolyticum grown in cellulose-fed continuous culture on a chemically defined medium under ammonium-limited conditions. Appl. Environ. Microbiol. 67: 3846-3851 (2001).

Eimert K, Wang SM, Lue WI, Chen J. Monogenic recessive mutations causing both late floral initiation and excess starch accumulation in Arabidopsis. Plant Cell 7: 1703-1712 (1995).

Farre EM, Tiessen A, Roessner U, Geigenberger P, Trethewey RN, Willmitzer L. Analysis of the compartmentation of glycolytic intermediates, nucleotides, sugars, organic acids, amino acids, and sugar alcohols in potato tubers using a nonaqueous fractionation method. Plant Physiol. 127: 685-700 (2001).

Fernie AR, Roessner U, Trethewey RN, Willmitzer L. The contribution of plastidial phosphoglucomutase to the control of starch synthesis within the potato tuber. Planta 213: 418-426 (2001).

Fernie AR, Tauberger E, Lytovchenko A, Roessner U, Willmitzer L, Trethewey RN. Antisense repression of cytosolic phosphoglucomutase in potato (Solanum tuberosum) results in severe growth retardation, reduction in tuber number and altered carbon metabolism. Planta 214: 510-520 (2002).

Fettke J, Nunes-Nesi A, Alpers J, Szkop M, Fernie AR, Steup M. Alterations in cytosolic glucose phosphate metabolism affect structural features and biochemical properties of starch-related heteroglycans. Plant Physiol. 148: 1614-1629 (2008).

Flemetakis E, Efrose RC, Ott T, Stedel C, Aivalakis G, Udvardi MK, Katinakis P. Spatial and temporal organization of sucrose metabolism in Lotus japonicus nitrogen-fixing nodules suggests a role for the elusive alkaline/neutral invertase. Plant Mol. Biol. 62: 53-69 (2006).

Fritzius T, Aeschbacher R, Wiemken A, Wingler A. Induction of ApL3 expression by trehalose complements the starch-deficient Arabidopsis mutant adg2-1 lacking ApL1, the large subunit of ADP-glucose pyrophosphorylase. Plant Physiol. 126: 883-889 (2001).

Fu L, Miseta A, Hunton D, Marchase RB, Bedwell DM. Loss of the major isoform of phosphoglucomutase results in altered calcium homeostasis in Saccharomyces cerevisiae. J. Biol. Chem. 275: 5431-5440 (2000).

Geigenberger P, Stitt M, Fernie AR. Metabolic control analysis and regulation of the conversion of sucrose to starch in growing potato tubers. Plant Cell Environ. 27: 655-673 (2004).

Gibon Y, Blaesing OE, Hannemann J, Carillo P, Hohne M, Hendriks JH, Palacios N, Cross J, Selbig J, Stitt M. A robot-based platform to measure multiple enzyme activities in Arabidopsis using a set of cycling assays: comparison of changes of enzyme activities and transcript levels during diurnal cycles and in prolonged darkness. Plant Cell 16: 3304-3325 (2004).

Guan C, Rosen ES, Boonsirichai K, Poff KL, Masson PH. The ARG1-LIKE2 gene of Arabidopsis functions in a gravity signal transduction pathway that is genetically distinct from the PGM pathway. Plant Physiol. 133: 100-112 (2003).

Guedon E, Desvaux M, Petitdemange H. Kinetic analysis of Clostridium cellulolyticum carbohydrate metabolism: J. Bacteriol. 182: 2010-2017 (2000).

Harrison CJ, Mould RM, Leech MJ, Johnson SA, Turner L, Schreck SL, Baird KM, Jack PL, Rawsthorne S, Hedley CL, Wang TL. The rug3 locus of pea encodes plastidial phosphoglucomutase. Plant Physiol. 122: 1187-1192 (2000).

Hendriks JH, Kolbe A, Gibon Y, Stitt M, Geigenberger P. ADP-glucose pyrophosphorylase is activated by posttranslational redox-modification in response to light and to sugars in leaves of Arabidopsis and other plant species. Plant Physiol. 133: 838-849 (2003).

Jin LH, Um HJ, Yin CJ, Kim YH, Lee JH. Proteomic analysis of curdlan-producing Agrobacterium sp. in response to pH downshift. J. Biotechnol. 138: 80-87 (2008).

Klaus D, Ohlrogge JB, Neuhaus HE, Dormann P. Increased fatty acid production in potato by engineering of acetyl-CoA carboxylase. Planta 219: 389-396 (2004).

Kortstee AJ, Appeldoorn NJ, Oortwijn ME, Visser RG. Differences in regulation of carbohydrate metabolism during early fruit development between domesticated tomato and two wild relatives. Planta 226: 929-939 (2007).

Kuznetsova E, Proudfoot M, Gonzalez CF, Brown G, Omelchenko MV, Borozan I, Carmel L, Wolf YI, Mori H, Savchenko AV, Arrowsmith CH, Koonin EV, Edwards AM, Yakunin AF. Genome-wide analysis of substrate specificities of the Escherichia coli haloacid dehalogenase-like phosphatase family. J. Biol. Chem. 281: 36149-36161 (2006).

Laday M, Szecsi A. Distinct electrophoretic isozyme profiles of Fusarium graminearum and closely related species. Syst. Appl. Microbiol. 24: 67-75 (2001).

Li CY, Weiss D, Goldschmidt EE. Effects of carbohydrate starvation on gene expression in citrus root. Planta 217: 11-20 (2003).

Li CY, Weiss D, Goldschmidt EE. Girdling affects carbohydrate-related gene expression in leaves, bark and roots of alternate-bearing citrus trees. Ann. Bot. (Lond.) 92: 137-143 (2003).

Lindahl M, Florencio FJ. Thioredoxin-linked processes in cyanobacteria are as numerous as in chloroplasts, but targets are different. Proc. Natl. Acad. Sci. U.S.A. 100: 16107-16112 (2003).

Lytovchenko A, Bieberich K, Willmitzer L, Fernie AR. Carbon assimilation and metabolism in potato leaves deficient in plastidial phosphoglucomutase. Planta 215: 802-811 (2002).

Lytovchenko A, Hajirezaei M, Eickmeier I, Mittendorf V, Sonnewald U, Willmitzer L, Fernie AR. Expression of an Escherichia coli phosphoglucomutase in potato (Solanum tuberosum L.) results in minor changes in tuber metabolism and a considerable delay in tuber sprouting. Planta 221: 915-927 (2005).

Lytovchenko A, Sweetlove L, Pauly M, Fernie AR. The influence of cytosolic phosphoglucomutase on photosynthetic carbohydrate metabolism. Planta 215: 1013-1021 (2002).

Manjunath S, Lee CH, VanWinkle P, Bailey-Serres J. Molecular and biochemical characterization of cytosolic phosphoglucomutase in maize. Expression during development and in response to oxygen deprivation. Plant Physiol. 117: 997-1006 (1998).

Massonneau A, Langlade N, Leon S, Smutny J, Vogt E, Neumann G, Martinoia E. Metabolic changes associated with cluster root development in white lupin (Lupinus albus L.): relationship between organic acid excretion, sucrose metabolism and energy status. Planta 213: 534-542 (2001).

Penger A, Pelzer-Reith B, Schnarrenberger C. cDNA sequence for the plastidic phosphoglucomutase from Spinacia oleracea (L.). Plant Physiol. 105: 1439-1440 (1994).

Periappuram C, Steinhauer L, Barton DL, Taylor DC, Chatson B, Zou J. The plastidic phosphoglucomutase from Arabidopsis. A reversible enzyme reaction with an important role in metabolic control. Plant Physiol. 122: 1193-1200 (2000).

Pharkya P, Maranas CD. An optimization framework for identifying reaction activation/inhibition or elimination candidates for overproduction in microbial systems. Metab. Eng. 8: 1-13 (2006).

Roscher A, Emsley L, Raymond P, Roby C. Unidirectional steady state rates of central metabolism enzymes measured simultaneously in a living plant tissue. J. Biol. Chem. 273: 25053-25061 (1998).

Sergeeva LI, Vonk J, Keurentjes JJ, van der Plas LH, Koornneef M, Vreugdenhil D. Histochemical analysis reveals organ-specific quantitative trait loci for enzyme activities in Arabidopsis. Plant Physiol. 134: 237-245 (2004).

Sergeeva LI, Vreugdenhil D. In situ staining of activities of enzymes involved in carbohydrate metabolism in plant tissues. J. Exp. Bot. 53: 361-370 (2002).

Solfanelli C, Poggi A, Loreti E, Alpi A, Perata P. Sucrose-specific induction of the anthocyanin biosynthetic pathway in Arabidopsis thaliana. Plant Physiol. 140: 637-646 (2006).

Sweetlove LJ, Burrell MM, ap Rees T. Characterization of transgenic potato (Solanum tuberosum) tubers with increased ADPglucose pyrophosphorylase. Biochem. J. 320: 487-492 (1996).

Tauberger E, Fernie AR, Emmermann M, Renz A, Kossmann J, Willmitzer L, Trethewey RN. Antisense inhibition of plastidial phosphoglucomutase provides compelling evidence that potato tuber amyloplasts import carbon from the cytosol in the form of glucose-6-phosphate. Plant J. 23: 43-53 (2000).

Tetlow IJ, Blissett KJ, Emes MJ. Metabolite pools during starch synthesis and carbohydrate oxidation in amyloplasts isolated from wheat endosperm. Planta 204: 100-108 (1998).

Thimm O, Blasing O, Gibon Y, Nagel A, Meyer S, Kruger P, Selbig J, Muller LA, Rhee SY, Stitt M. MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant J. 37: 914-939 (2004).

Trethewey RN, Riesmeier JW, Willmitzer L, Stitt M, Geigenberger P. Tuber-specific expression of a yeast invertase and a bacterial glucokinase in potato leads to an activation of sucrose phosphate synthase and the creation of a sucrose futile cycle. Planta 208: 227-238 (1999).

Weise SE, Weber AP, Sharkey TD. Maltose is the major form of carbon exported from the chloroplast at night. Planta 218: 474-482 (2004).

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