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N Use By Plants
Nitrate Assimilation
Ammonia Assimilation
Glu, Gln, Asn, Gly, Ser
Aminotransferases
Asp, Ala, GABA
Val, Leu, Ileu, Thr, Lys
Pro, Arg, Orn
Polyamines
Non-protein AAs
Alkaloids
Sulfate Assimilation
Cys, Met, AdoMet, ACC
His, Phe, Tyr, Tryp
Secondary Products
Onium Compounds
Enzymes
Methods
Simulation
References
HORT640 - Metabolic Plant Physiology

References, imidazole and glycerol

Beismann-Driemeyer S, Sterner R. Imidazole glycerol phosphate synthase from Thermotoga maritima - Quaternary structure, steady-state kinetics, and reaction mechanism of the bienzyme complex. J. Biol. Chem. 276: 20387-20396 (2001).

Busch S, Hoffmann B, Valerius O, Starke K, Duvel K, Braus GH. Regulation of the Aspergillus nidulans hisB gene by histidine starvation. Curr. Genet. 38: 314-322 (2001).

Chaudhuri BN, Lange SC, Myers RS, Chittur SV, Davisson VJ, Smith JL. Crystal structure of imidazole glycerol phosphate synthase: A tunnel through a (beta/alpha)(8) barrel joins two active sites. Structure 9: 987-997 (2001).

Chen HM, Ho CW, Liu JW, Lin KY, Wang YT, Lu CH, Liu HL. Production, IMAC purification, and molecular modeling of N-carbamoyl-D-amino acid amidohydrolase C-terminally fused with a six-His peptide. Biotechnol. Prog. 19: 864-873 (2003).

Chittur SV, Chen Y, Davisson VJ. Expression and purification of imidazole glycerol phosphate synthase from Saccharomyces cerevisiae. Protein Expr. Purif. 18: 366-377 (2000).

Cox JM, Hawkes TR, Bellini P, Ellis RM, Barrett R, Swanborough JJ, Russell SE, Walker PA, Barnes NJ, Knee AJ, Lewis T, Davies PR. The design and synthesis of inhibitors of imidazoleglycerol phosphate dehydratase as potential herbicides. Pestic. Sci. 50: 297-311 (1997).

Derkos-Sojak V, Pigac J, Delic V. Biochemical and genetic studies of a histidine regulatory mutant of Streptomyces coelicolor A3 (2). J. Basic Microbiol. 25: 479-485 (1985).

Douangamath A, Walker M, Beismann-Driemeyer S, Vega-Fernandez MC, Sterner R, Wilmanns M. Structural evidence for ammonia tunneling across the (beta alpha)(8) barrel of the imidazole glycerol phosphate synthase bienzyme complex. Structure 10: 185-193 (2002).

Erickson FL, Hannig EM. Characterization of Schizosaccharomyces pombe his1 and his5 cDNAs. Yeast 11: 157-167 (1995).

Ferrari D, Yang LH, Miles EW, Dunn MF. Beta D305a mutant of tryptophan synthase shows strongly perturbed allosteric regulation and substrate specificity. Biochemistry 40: 7421-7432 (2001).

Fujimori K, Tada S, Kanai S, Ohta D. Molecular cloning and characterization of the gene encoding N'-[(5'-phosphoribosyl)-formimino]-5-aminoimidazole-4-carboxamide ribonucleotide (BBM II) isomerase from Arabidopsis thaliana. Mol. Gen. Genet. 259: 216-223 (1998).

Guyer D, Patton D, Ward E. Evidence for cross-pathway regulation of metabolic gene expression in plants. Proc. Natl. Acad. Sci. U.S.A. 92: 4997-5000 (1995).

Harris RM, Ngo H, Dunn MF. Synergistic effects on escape of a ligand from the closed tryptophan synthase bienzyme complex. Biochemistry 44: 16886-16895 (2005).

Hawkes TR, Thomas PG, Edwards LS, Rayner SJ, Wilkinson KW, Rice DW. Purification and characterization of the imidazoleglycerol-phosphate dehydratase of Saccharomyces cerevisiae from recombinant Escherichia coli. Biochem. J. 306: 385-397 (1995).

Hocker B, Beismann-Driemeyer S, Hettwer S, Lustig A, Sterner R. Dissection of a (beta alpha)(8)-barrel enzyme into two folded halves. Nat. Struct. Biol. 8: 32-36 (2001).

Kasunic DA, Kushner SR. Expression of the HIS3 gene of Saccharomyces cerevisiae in polynucleotide phosphorylase-deficient strains of Escherichia coli K-12. Gene 12: 1-10 (1980).

Kidd GL, Gross SR. Specific regulatory interconnection between the leucine and histidine pathways of Neurospora crassa. J. Bacteriol. 158: 121-127 (1984).

Mano J, Hatano M, Koizumi S, Tada S, Hashimoto M, Scheidegger A. Purification and properties of a monofunctional imidazoleglycerol-phosphate dehydratase from wheat. Plant Physiol. 103: 733-739 (1993).

O'Donoghue P, Amaro RE, Luthey-Schulten Z. On the structure of hisH: Protein structure prediction in the context of structural and functional genomics. J. Struct. Biol. 134: 257-268 (2001).

Ohta D, Mori I, Ward E. Inhibitors of imidazoleglycerolphosphate dehydratase as herbicides. Weed Sci. 45: 610-620 (1997).

Persans MW, Yan X, Patnoe JM, Kramer U, Salt DE. Molecular dissection of the role of histidine in nickel hyperaccumulation in Thlaspi goesingense (Halacsy). Plant Physiol. 121: 1117-1126 (1999).

Raushel FM, Thoden JB, Holden HM. Enzymes with molecular tunnels. Acc. Chem. Res. 36: 539-548 (2003).

Sok DE. Ascorbate-induced oxidative inactivation of Zn2+-glycerophosphocholine cholinephosphodiesterase. J. Neurochem. 70: 1167-1174 (1998).

Tada S, Hatano M, Nakayama Y, Volrath S, Guyer D, Ward E, Ohta D. Insect cell expression of recombinant imidazoleglycerolphosphate dehydratase of Arabidopsis and wheat and inhibition by triazole herbicides. Plant Physiol. 109: 153-159 (1995).

Tada S, Volrath S, Guyer D, Scheidegger A, Ryals J, Ohta D, Ward E. Isolation and characterization of cDNAs encoding imidazoleglycerolphosphate dehydratase from Arabidopsis thaliana. Plant Physiol. 105: 579-583 (1994).

Thoma R, Obmolova G, Lang DA, Schwander M, Jeno P, Sterner R, Wilmanns M. Efficient expression, purification and crystallisation of two hyperthermostable enzymes of histidine biosynthesis. FEBS Lett. 454: 1-6 (1999).

Thoma R, Schwander M, Liebl W, Kirschner K, Sterner R. A histidine gene cluster of the hyperthermophile Thermotoga maritima: sequence analysis and evolutionary significance. Extremophiles 2: 379-389 (1998).

Valerius O, Draht O, Kubler E, Adler K, Hoffmann B, Braus GH. Regulation of hisHF transcription of Aspergillus nidulans by adenine and amino acid limitation. Fungal Genet. Biol. 32: 21-31 (2001).

Yamanishi M, Yunoki M, Tobimatsu T, Sato H, Matsui J, Dokiya A, Iuchi Y, Oe K, Suto K, Shibata N, Morimoto Y, Yasuoka N, Toraya T. The crystal structure of coenzyme B12-dependent glycerol dehydratase in complex with cobalamin and propane-1,2-diol. Eur. J. Biochem. 269: 4484-4494 (2002).

Number of references = 29

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David Rhodes
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Last Update: 10/01/09