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HORT640 - Metabolic Plant Physiology
References, glycerate kinase
Anderson LE, Carol AA. Enzyme co-localization in the pea leaf cytosol: 3-P-glycerate kinase, glyceraldehyde-3-P dehydrogenase, triose-P isomerase and aldolase. Plant Sci. 169: 620-628 (2005).
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Bazan JF, Fletterick RJ, Pilkis SJ. Evolution of a bifunctional enzyme: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase. Proc. Natl. Acad. Sci. U.S.A. 86: 9642-9646 (1989).
Beudeker RF, Tabita FR. Control of photorespiratory glycolate metabolism in an oxygen-resistant mutant of Chlorella sorokiniana. J. Bacteriol. 155: 650-656 (1983).
Boldt R, Edner C, Kolukisaoglu U, Hagemann M, Weckwerth W, Wienkoop S, Morgenthal K, Bauwe H. D-GLYCERATE 3-KINASE, the last unknown enzyme in the photorespiratory cycle in Arabidopsis, belongs to a novel kinase family. Plant Cell 17: 2413-2420 (2005).
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Brice DC, Bryant JA, Dambrauskas G, Drury SC, Littlechild JA. Cloning and expression of cytosolic phosphoglycerate kinase from pea (Pisum sativum L.). J. Exp. Bot. 55: 955-956 (2004).
Calik P, Calik G, Taka S, Ozdamar TH. Metabolic flux analysis for serine alkaline protease fermentation by Bacillus licheniformis in a defined medium: effects of the oxygen transfer rate. Biotechnol. Bioeng. 64: 151-167 (1999).
Chistoserdova L, Lidstrom ME. Identification and mutation of a gene required for glycerate kinase activity from a facultative methylotroph, Methylobacterium extorquens AM1. J. Bacteriol. 179: 4946-4948 (1997).
Daniel RM, Danson MJ, Eisenthal R. The temperature optima of enzymes: a new perspective on an old phenomenon. Trends Biochem. Sci. 26: 223-225 (2001).
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Durmus Tekir S, Cakir T, O Ulgen K. Analysis of enzymopathies in the human red blood cells by constraint-based stoichiometric modeling approaches. Comput. Biol. Chem. 30: 327-338 (2006).
Eckardt NA. Photorespiration revisited. Plant Cell 17: 2139-2141 (2005).
Fridlyand LE, Backhausen JE, Holtgrefe S, Kitzmann C, Scheibe R. Quantitative evaluation of the rate of 3-phosphoglycerate reduction in chloroplasts. Plant Cell Physiol. 38: 1177-1186 (1997).
Fridlyand LE, Backhausen JE, Scheibe R. Homeostatic regulation upon changes of enzyme activities in the Calvin cycle as an example for general mechanisms of flux control. What can we expect from transgenic plants? Photosynth. Res. 61: 227-239 (1999).
Gao L, Mejias R, Echevarria M, Lopez-Barneo J. Induction of the glucose-6-phosphate dehydrogenase gene expression by chronic hypoxia in PC12 cells. FEBS Lett. 569: 256-260 (2004).
Geigenberger P, Geiger M, Stitt M. High-temperature perturbation of starch synthesis is attributable to inhibition of ADP-glucose pyrophosphorylase by decreased levels of glycerate-3-phosphate in growing potato tubers. Plant Physiol. 117: 1307-1316 (1998).
Geigenberger P, Regierer B, Lytovchenko A, Leisse A, Schauer N, Springer F, Kossmann J, Fernie AR. Heterologous expression of a ketohexokinase in potato plants leads to inhibited rates of photosynthesis, severe growth retardation and abnormal leaf development. Planta 218: 569-578 (2004).
Geiger M, Haake V, Ludewig F, Sonnewald U, Stitt M. The nitrate and ammonium nitrate supply have a major influence on the response of photosynthesis, carbon metabolism, nitrogen metabolism and growth to elevated carbon dioxide in tobacco. Plant Cell Environ. 22: 1177-1199 (1999).
Gonzalez B, de Graaf A, Renaud M, Sahm H. Dynamic in vivo (31)P nuclear magnetic resonance study of Saccharomyces cerevisiae in glucose-limited chemostat culture during the aerobic-anaerobic shift. Yeast 16: 483-497 (2000).
Hausler RE, Rademacher T, Li J, Lipka V, Fischer KL, Schubert S, Kreuzaler F, Hirsch HJ. Single and double overexpression of C4-cycle genes had differential effects on the pattern of endogenous enzymes, attenuation of photorespiration and on contents of UV protectants in transgenic potato and tobacco plants. J. Exp. Bot. 52: 1785-1803 (2001).
Hess WR, Muller A, Nagy F, Borner T. Ribosome-deficient plastids affect transcription of light-induced nuclear genes: genetic evidence for a plastid-derived signal. Mol. Gen. Genet. 242: 305-312 (1994).
Huang S, Sirikhachornkit A, Faris JD, Su X, Gill BS, Haselkorn R, Gornicki P. Phylogenetic analysis of the acetyl-CoA carboxylase and 3-phosphoglycerate kinase loci in wheat and other grasses. Plant Mol. Biol. 48: 805-820 (2002).
Hurry V, Strand A, Furbank R, Stitt M. The role of inorganic phosphate in the development of freezing tolerance and the acclimatization of photosynthesis to low temperature is revealed by the pho mutants of Arabidopsis thaliana. Plant J. 24: 383-396 (2000).
Kasten B, Buck F, Nuske J, Reski R. Cytokinin affects nuclear- and plastome-encoded energy-converting plastid enzymes. Planta 201: 261-272 (1997).
Kitayama M, Togasaki RK. Purification and cDNA isolation of chloroplastic phosphoglycerate kinase from Chlamydomonas reinhardtii. Plant Physiol. 107: 393-400 (1995).
Kroth PG, Chiovitti A, Gruber A, Martin-Jezequel V, Mock T, Parker MS, Stanley MS, Kaplan A, Caron L, Weber T, Maheswari U, Armbrust EV, Bowler C. A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis. PLoS ONE 3: e1426 (2008).
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Lin KC, Bushnell WR, Smith AG, Szabo LJ. Temporal accumulation patterns of defence response gene transcripts in relation to resistant reactions in oat inoculated with Puccinia graminis. Physiol. Mol. Plant Pathol. 52: 95-114 (1998).
Lopes MS, Araus JL. Comparative genomic and physiological analysis of nutrient response to NH4+, NH4+:NO3- and NO3- in barley seedlings. Physiol. Plant. 134: 134-150 (2008).
Markham JE, Kruger NJ. Kinetic properties of bifunctional 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase from spinach leaves. Eur. J. Biochem. 269: 1267-1277 (2002).
Maroco JP, Ku MSB, Edwards GE. Utilization of O2 in the metabolic optimization of C4 photosynthesis. Plant Cell Environ. 23: 115-121 (2000).
Moreno-Sanchez R, Encalada R, Marin-Hernandez A, Saavedra E. Experimental validation of metabolic pathway modeling. An illustration with glycotic segments from Entamoeba histolytica. FEBS J. 275: 3454-3469 (2008).
Mulquiney PJ, Kuchel PW. Model of 2,3-bisphosphoglycerate metabolism in the human erythrocyte based on detailed enzyme kinetic equations: computer simulation and Metabolic Control Analysis. Biochem. J. 342: 597-604 (1999).
Mulquiney PJ, Kuchel PW. Model of 2,3-bisphosphoglycerate metabolism in the human erythrocyte based on detailed enzyme kinetic equations: equations and parameter refinement. Biochem. J. 342: 581-596 (1999).
Parker R, Flowers TJ, Moore AL, Harpham NV. An accurate and reproducible method for proteome profiling of the effects of salt stress in the rice leaf lamina. J. Exp. Bot. 57: 1109-1118 (2006).
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Pucar D, Janssen E, Dzeja PP, Juranic N, Macura S, Wieringa B, Terzic A. Compromised energetics in the adenylate kinase AK1 gene knockout heart under metabolic stress. J. Biol. Chem. 275: 41424-41429 (2000).
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Roberts K, Granum E, Leegood RC, Raven JA. C3 and C4 pathways of photosynthetic carbon assimilation in marine diatoms are under genetic, not environmental, control. Plant Physiol. 145: 230-235 (2007).
Schrader MC, Eskey CJ, Simplaceanu V, Ho C. A carbon-13 nuclear magnetic resonance investigation of the metabolic fluxes associated with glucose metabolism in human erythrocytes. Biochim. Biophys. Acta 1182: 162-178 (1993).
Sudo E, Makino A, Mae T. Differences between rice and wheat in ribulose-1,5-bisphosphate regeneration capacity per unit of leaf-N content. Plant Cell Environ. 26: 255-263 (2003).
Takahashi S, Bauwe H, Badger M. Impairment of the photorespiratory pathway accelerates photoinhibition of photosystem II by suppression of repair but not acceleration of damage processes in Arabidopsis. Plant Physiol. 144: 487-494 (2007).
Tauler A, el-Maghrabi MR, Pilkis SJ. Functional homology of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphoglycerate mutase, and 2,3-bisphosphoglycerate mutase. J. Biol. Chem. 262: 16808-16815 (1987).
Tecsi LI, Maule AJ, Smith AM, Leegood RC. Metabolic alterations in cotyledons of Cucurbita pepo infected by cucumber mosaic virus. J. Exp. Bot. 45: 1541-1551 (1994).
Westram A, Lloyd JR, Roessner U, Riesmeier JW, Kossmann J. Increases of 3-phosphoglyceric acid in potato plants through antisense reduction of cytoplasmic phosphoglycerate mutase impairs photosynthesis and growth, but does not increase starch contents. Plant Cell Environ. 25: 1133-1143 (2002).
Yang X, Liang Z, Wen X, Lu C. Genetic engineering of the biosynthesis of glycinebetaine leads to increased tolerance of photosynthesis to salt stress in transgenic tobacco plants. Plant Mol. Biol. 66: 73-86 (2008).
Number of references = 50
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