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Nitrate Assimilation
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HORT640 - Metabolic Plant Physiology

References, chalcone isomerase

Beld M, Martin C, Huits H, Stuitje AR, Gerats AG 1989 Flavonoid synthesis in Petunia hybrida: partial characterization of dihydroflavonol-4-reductase genes. Plant Mol. Biol. 13: 491-502.

Boddu J, Jiang C, Sangar V, Olson T, Peterson T, Chopra S 2006 Comparative structural and functional characterization of sorghum and maize duplications containing orthologous myb transcription regulators of 3-deoxyflavonoid biosynthesis. Plant Mol. Biol. 60: 185-199.

Boss PK, Davies C, Robinson SP 1996 Analysis of the expression of anthocyanin pathway genes in developing Vitis vinifera L. cv Shiraz grape berries and the implications for pathway regulation. Plant Physiol. 111: 1059-1066.

Bovy A, De Vos R, Kemper M, Schijlen E, Almenar Pertejo M, Muir S, Collins G, Robinson S, Verhoeyen M, Hughes S, Santos-Buelga C, Van Tunen A 2002 High-flavonol tomatoes resulting from the heterologous expression of the maize transcription factor genes LC and C1. Plant Cell 14: 2509-2526.

Bruce W, Folkerts O, Garnaat C, Crasta O, Roth B, Bowen B 2000 Expression profiling of the maize flavonoid pathway genes controlled by estradiol-inducible transcription factors CRC and P. Plant Cell 12: 65-80.

Burbulis IE, Winkel-Shirley B 1999 Interactions among enzymes of the Arabidopsis flavonoid biosynthetic pathway. Proc. Natl. Acad. Sci. U.S.A. 96: 12929-12934.

Cain CC, Saslowsky DE, Walker RA, Shirley BW 1997 Expression of chalcone synthase and chalcone isomerase proteins in Arabidopsis seedlings. Plant Mol. Biol. 35: 377-381.

Deng C, Davis TM 2001 Molecular identification of the yellow fruit color (c) locus in diploid strawberry: a candidate gene approach. Theor. Appl. Genet. 103: 316-322.

Dong X, Braun EL, Grotewold E 2001 Functional conservation of plant secondary metabolic enzymes revealed by complementation of Arabidopsis flavonoid mutants with maize genes. Plant Physiol. 127: 46-57.

Forkmann G, Dangelmayr B 1980 Genetic control of chalcone isomerase activity in flowers of Dianthus caryophyllus. Biochem. Genet. 18: 519-527.

Grotewold E, Peterson T 1994 Isolation and characterization of a maize gene encoding chalcone flavonone isomerase. Mol. Gen. Genet. 242: 1-8.

Hagmann ML, Heller W, Grisebach H 1983 Induction and characterization of a microsomal flavonoid 3'-hydroxylase from parsley cell cultures. Eur. J. Biochem. 134: 547-554.

Hartmann U, Sagasser M, Mehrtens F, Stracke R, Weisshaar B 2005 Differential combinatorial interactions of cis-acting elements recognized by R2R3-MYB, BZIP, and BHLH factors control light-responsive and tissue-specific activation of phenylpropanoid biosynthesis genes. Plant Mol. Biol. 57: 155-171.

Itoh Y, Higeta D, Suzuki A, Yoshida H, Ozeki Y 2002 Excision of transposable elements from the chalcone isomerase and dihydroflavonol 4-reductase genes may contribute to the variegation of the yellow-flowered carnation (Dianthus caryophyllus). Plant Cell Physiol. 43: 578-585.

Jez JM, Bowman ME, Dixon RA, Noel JP 2000 Structure and mechanism of the evolutionarily unique plant enzyme chalcone isomerase. Nat. Struct. Biol. 7: 786-791.

Kubasek WL, Ausubel FM, Shirley BW 1998 A light-independent developmental mechanism potentiates flavonoid gene expression in Arabidopsis seedlings. Plant Mol. Biol. 37: 217-223.

Kuittinen H, Aguade M 2000 Nucleotide variation at the CHALCONE ISOMERASE locus in Arabidopsis thaliana. Genetics 155: 863-872.

Leonard E, Yan Y, Koffas MA 2006 Functional expression of a P450 flavonoid hydroxylase for the biosynthesis of plant-specific hydroxylated flavonols in Escherichia coli. Metab. Eng. 8: 172-181.

Li FX, Jin ZP, Zhao DX, Cheng LQ, Fu CX, Ma F 2006 Overexpression of the Saussurea medusa chalcone isomerase gene in S. involucrata hairy root cultures enhances their biosynthesis of apigenin. Phytochemistry 67: 553-560.

Liu CJ, Blount JW, Steele CL, Dixon RA 2002 Bottlenecks for metabolic engineering of isoflavone glycoconjugates in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A. 99: 14578-14583.

McKhann HI, Hirsch AM 1994 Isolation of chalcone synthase and chalcone isomerase cDNAs from alfalfa (Medicago sativa L.): highest transcript levels occur in young roots and root tips. Plant Mol. Biol. 24: 767-777.

Mehrtens F, Kranz H, Bednarek P, Weisshaar B 2005 The Arabidopsis transcription factor MYB12 is a flavonol-specific regulator of phenylpropanoid biosynthesis. Plant Physiol. 138: 1083-1096.

Muir SR, Collins GJ, Robinson S, Hughes S, Bovy A, De Vos CHR, van Tunen AJ, Verhoeyen ME 2001 Overexpression of petunia chalcone isomerase in tomato results in fruit containing increased levels of flavonols. Nat. Biotechnol. 19: 470-474.

Nishihara M, Nakatsuka T, Yamamura S 2005 Flavonoid components and flower color change in transgenic tobacco plants by suppression of chalcone isomerase gene. FEBS Lett. 579: 6074-6078.

Noda N, Kanno Y, Kato N, Kazuma K, Suzuki M 2004 Regulation of gene expression involved in flavonol and anthocyanin biosynthesis during petal development in lisianthus (Eustoma grandiflorum). Physiol. Plant. 122: 305-313.

Noh B, Spalding EP 1998 Anion channels and the stimulation of anthocyanin accumulation by blue light in Arabidopsis seedlings. Plant Physiol. 116: 503-509.

Paolacci AR, D'Ovidio R, Marabottini R, Nali C, Lorenzini G, Abenavoli MR, Badiani M 2001 Ozone induces a differential accumulation of phenyalanine ammonia-lyase, chalcone synthase and chalcone isomerase RNA transcripts in sensitive and resistant bean cultivars. Aust. J. Plant Physiol. 28: 425-428.

Pelletier MK, Burbulis IE, Winkel-Shirley B 1999 Disruption of specific flavonoid genes enhances the accumulation of flavonoid enzymes and end-products in Arabidopsis seedlings. Plant Mol. Biol. 40: 45-54.

Pelletier MK, Shirley BW 1996 Analysis of flavanone 3-hydroxylase in Arabidopsis seedlings. Coordinate regulation with chalcone synthase and chalcone isomerase. Plant Physiol. 111: 339-345.

Ralston L, Subramanian S, Matsuno M, Yu O 2005 Partial reconstruction of flavonoid and isoflavonoid biosynthesis in yeast using soybean type I and type II chalcone isomerases. Plant Physiol. 137: 1375-1388.

Rivera-Becerril F, van Tuinen D, Martin-Laurent F, Metwally A, Dietz KJ, Gianinazzi S, Gianinazzi-Pearson V 2005 Molecular changes in Pisum sativum L. roots during arbuscular mycorrhiza buffering of cadmium stress. Mycorrhiza 16: 51-60.

Saslowsky D, Winkel-Shirley B 2001 Localization of flavonoid enzymes in Arabidopsis roots. Plant J. 27: 37-48.

Seshime Y, Juvvadi PR, Fujii I, Kitamoto K 2005 Genomic evidences for the existence of a phenylpropanoid metabolic pathway in Aspergillus oryzae. Biochem. Biophys. Res. Commun. 337: 747-751.

Sevenier R, van der Meer IM, Bino R, Koops AJ 2002 Increased production of nutriments by genetically engineered crops. J. Am. Coll. Nutr. 21: 199S-204S.

Shimada N, Aoki T, Sato S, Nakamura Y, Tabata S, Ayabe S 2003 A cluster of genes encodes the two types of chalcone isomerase involved in the biosynthesis of general flavonoids and legume-specific 5-deoxy(iso)flavonoids in Lotus japonicus. Plant Physiol. 131: 941-951.

Sparvoli F, Martin C, Scienza A, Gavazzi G, Tonelli C 1994 Cloning and molecular analysis of structural genes involved in flavonoid and stilbene biosynthesis in grape (Vitis vinifera L.). Plant Mol. Biol. 24: 743-755.

Tian L, Dixon RA 2006 Engineering isoflavone metabolism with an artificial bifunctional enzyme. Planta 224: 496-507.

Trognitz F, Manosalva P, Gysin R, Nino-Liu D, Simon R, Herrera MD, Trognitz B, Ghislain M, Nelson R 2002 Plant defense genes associated with quantitative resistance to potato late blight in Solanum phureja x dihaploid S. tuberosum hybrids. Mol. Plant Microbe Interact. 15: 587-597.

van Tunen AJ, Koes RE, Spelt CE, van der Krol AR, Stuitje AR, Mol JN 1988 Cloning of the two chalcone flavanone isomerase genes from Petunia hybrida: coordinate, light-regulated and differential expression of flavonoid genes. EMBO J. 7: 1257-1263.

van Tunen AJ, Mol JN 1987 A novel purification procedure for chalcone flavanone isomerase from Petunia hybrida and the use of its antibodies to characterize the Po mutation. Arch. Biochem. Biophys. 257: 85-91.

van Tunen AJ, Mur LA, Recourt K, Gerats AG, Mol JN 1991 Regulation and manipulation of flavonoid gene expression in anthers of petunia: the molecular basis of the Po mutation. Plant Cell 3: 39-48.

Verhoeyen ME, Bovy A, Collins G, Muir S, Robinson S, de Vos CH, Colliver S 2002 Increasing antioxidant levels in tomatoes through modification of the flavonoid biosynthetic pathway. J. Exp. Bot. 53: 2099-2106.

Wood AJ, Davies E 1994 A cDNA encoding chalcone isomerase from aged pea epicotyls. Plant Physiol. 104: 1465-1466.

Zuker A, Tzfira T, Ben-Meir H, Ovadis M, Shklarman E, Itzhaki H, Forkmann G, Martens S, Neta-Sharir I, Weiss D, Vainstein A 2002 Modification of flower color and fragrance by antisense suppression of the flavanone 3-hydroxylase gene. Mol. Breed. 9: 33-41.

Number of references = 44

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