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N Use By Plants
Nitrate Assimilation
Ammonia Assimilation
Glu, Gln, Asn, Gly, Ser
Aminotransferases
Asp, Ala, GABA
Val, Leu, Ileu, Thr, Lys
Pro, Arg, Orn
Polyamines
Non-protein AAs
Alkaloids
Sulfate Assimilation
Cys, Met, AdoMet, ACC
His, Phe, Tyr, Tryp
Secondary Products
Onium Compounds
Enzymes
Methods
Simulation
References
HORT640 - Metabolic Plant Physiology

References, benzaldehyde or benzoate or benzoic or benzoyl or benzyl

Abd El-Mawla AM, Beerhues L. Benzoic acid biosynthesis in cell cultures of Hypericum androsaemum. Planta 214: 727-733 (2002).

Abd El-Mawla AM, Schmidt W, Beerhues L. Cinnamic acid is a precursor of benzoic acids in cell cultures of Hypericum androsaemum L. but not in cell cultures of Centaurium erythraea RAFN. Planta 212: 288-293 (2001).

Abouem A Zintchem A, Bikobo DN, de Theodore Atchade A, Mbing JN, Gangoue-Pieboji J, Tih RG, Blond A, Pegnyemb DE, Bodo B. Nitrile glucosides and serotobenine from Campylospermum glaucum and Ouratea turnarea. Phytochemistry 69: 2209-2213 (2008).

Agerbirk N, Warwick SI, Hansen PR, Olsen CE. Sinapis phylogeny and evolution of glucosinolates and specific nitrile degrading enzymes. Phytochemistry 69: 2937-2949 (2008).

Aghajanian S, Engel PC. Use of protein engineering to explore subunit interactions in an allosteric enzyme: construction of inter-subunit hybrids in Clostridium symbiosum glutamate dehydrogenase. Protein Eng. 11: 569-575 (1998).

Agnihotri VK, Elsohly HN, Khan SI, Smillie TJ, Khan IA, Walker LA. Antioxidant constituents of Nymphaea caerulea flowers. Phytochemistry 69: 2061-2066 (2008).

Akagawa M, Suyama K. Amine oxidase-like activity of polyphenols. Mechanism and properties. Eur. J. Biochem. 268: 1953-1963 (2001).

Akiyama T, Shibuya M, Liu HM, Ebizuka Y. p-Coumaroyltriacetic acid synthase, a new homologue of chalcone synthase, from Hydrangea macrophylla var. thunbergii. Eur. J. Biochem. 263: 834-839 (1999).

Al-Hammadi AS, Sreelakshmi Y, Negi S, Siddiqi I, Sharma R. The polycotyledon mutant of tomato shows enhanced polar auxin transport. Plant Physiol. 133: 113-125 (2003).

Albach DC, Held Gotfredsen C, Jensen SR. Iridoid glucosides of Paederota lutea and the relationships between Paederota and Veronica. Phytochemistry 65: 2129-2134 (2004).

Alcantara J, Bird DA, Franceschi VR, Facchini PJ. Sanguinarine biosynthesis is associated with the endoplasmic reticulum in cultured opium poppy cells after elicitor treatment. Plant Physiol. 138: 173-183 (2005).

Alexander RW. Teasing apart the Taxol pathway. Trends Biochem. Sci. 26: 152-153 (2001).

Ali Z, Ito T, Tanaka T, Nakaya K, Murata J, Darnaedi D, Iinuma M. Acetophenone C-glucosides and stilbene O-glucosides in Upuna borneensis. Phytochemistry 65: 2141-2146 (2004).

Alkhatib R, Hennebelle T, Joha S, Idziorek T, Preudhomme C, Quesnel B, Sahpaz S, Bailleul F. Activity of elaeochytrin A from Ferula elaeochytris on leukemia cell lines. Phytochemistry 69: 2979-2983 (2008).

Allison G, Gough K, Rogers L, Smith A. A suicide vector for allelic recombination involving the gene for glutamate 1-semialdehyde aminotransferase in the cyanobacterium Synechococcus PCC 7942. Mol. Gen. Genet. 255: 392-399 (1997).

Alvarez S, Marsh EL, Schroeder SG, Schachtman DP. Metabolomic and proteomic changes in the xylem sap of maize under drought. Plant Cell Environ. 31: 325-340 (2008).

Andersen BR, Jin G, Chen R, Ertl JR, Chen CM. Transcriptional regulation of hydroxypyruvate reductase gene expression by cytokinin in etiolated pumpkin cotyledons. Planta 198: 1-5 (1996).

Andersson S, Dobson HE. Antennal responses to floral scents in the butterfly Heliconius melpomene. J. Chem. Ecol. 29: 2319-2330 (2003).

Appling DR, Rabinowitz JC. Evidence for overlapping active sites in a multifunctional enzyme: immunochemical and chemical modification studies on C1-tetrahydrofolate synthase from Saccharomyces cerevisiae. Biochemistry 24: 3540-3547 (1985).

Asakawa Y, Toyota M, von Konrat M, Braggins JE. Volatile components of selected species of the liverwort genera Frullania and Schusterella (Frullaniaceae) from New Zealand, Australia and South America: a chemosystematic approach. Phytochemistry 62: 439-452 (2003).

Atkinson IJ, Nargang FE, Cossins EA. Folylpolyglutamate synthesis in Neurospora crassa: transformation of polyglutamate-deficient mutants. Phytochemistry 38: 603-608 (1995).

Azzariti A, Vacca RA, Giannattasio S, Merafina RS, Marra E, Doonan S. Kinetic properties and thermal stabilities of mutant forms of mitochondrial aspartate aminotransferase. Biochim. Biophys. Acta 1386: 29-38 (1998).

Bach M, Schnitzler JP, Seitz HU. Elicitor-induced changes in Ca2+ influx, K+ efflux, and 4-hydroxybenzoic acid synthesis in protoplasts of Daucus carota L. Plant Physiol. 103: 407-412 (1993).

Bagnaresi P, Basso B, Pupillo P. The NADH-dependent Fe(3+)-chelate reductases of tomato roots. Planta 202: 427-434 (1997).

Bak S, Olsen CE, Halkier BA, Moller BL. Transgenic tobacco and Arabidopsis plants expressing the two multifunctional sorghum cytochrome P450 enzymes, CYP79A1 and CYP71E1, are cyanogenic and accumulate metabolites derived from intermediates in dhurrin biosynthesis. Plant Physiol. 123: 1437-1448 (2000).

Bak S, Olsen CE, Petersen BL, Moller BL, Halkier BA. Metabolic engineering of p-hydroxybenzylglucosinolate in Arabidopsis by expression of the cyanogenic CYP79A1 from Sorghum bicolor. Plant J. 20: 663-671 (1999).

Barillas W, Beerhues L. 3-Hydroxybenzoate:coenzyme A ligase and 4-coumarate:coenzyme A ligase from cultured cells of Centaurium erythraea. Planta 202: 112-116 (1997).

Barkman TJ, Martins TR, Sutton E, Stout JT. Positive selection for single amino acid change promotes substrate discrimination of a plant volatile-producing enzyme. Mol. Biol. Evol. 24: 1320-1329 (2007).

Bartholomew DM, Van Dyk DE, Lau SM, O'Keefe DP, Rea PA, Viitanen PV. Alternate energy-dependent pathways for the vacuolar uptake of glucose and glutathione conjugates. Plant Physiol. 130: 1562-1572 (2002).

Bartolini B, Tipton KF, Bianchi L, Stephenson D, Cunningham C, Della Corte L. Determination of monoamine oxidase activity by HPLC with fluorimetric detection. Neurobiology (Bp) 7: 109-121 (1999).

Basset GJ, Quinlivan EP, Ravanel S, Rebeille F, Nichols BP, Shinozaki K, Seki M, Adams-Phillips LC, Giovannoni JJ, Gregory JF 3rd, Hanson AD. Folate synthesis in plants: the p-aminobenzoate branch is initiated by a bifunctional PabA-PabB protein that is targeted to plastids. Proc. Natl. Acad. Sci. U.S.A. 101: 1496-1501 (2004).

Basset GJ, Ravanel S, Quinlivan EP, White R, Giovannoni JJ, Rebeille F, Nichols BP, Shinozaki K, Seki M, Gregory JF 3rd, Hanson AD. Folate synthesis in plants: the last step of the p-aminobenzoate branch is catalyzed by a plastidial aminodeoxychorismate lyase. Plant J. 40: 453-461 (2004).

Bauer BE, Rossington D, Mollapour M, Mamnun Y, Kuchler K, Piper PW. Weak organic acid stress inhibits aromatic amino acid uptake by yeast, causing a strong influence of amino acid auxotrophies on the phenotypes of membrane transporter mutants. Eur. J. Biochem. 270: 3189-3195 (2003).

Bayindir U, Alfermann AW, Fuss E. Hinokinin biosynthesis in Linum corymbulosum Reichenb. Plant J. 55: 810-820 (2008).

Bazire A, Diab F, Jebbar M, Haras D. Influence of high salinity on biofilm formation and benzoate assimilation by Pseudomonas aeruginosa. J. Ind. Microbiol. Biotechnol. 34: 5-8 (2007).

Beggs JD, Fewson CA. Regulation of synthesis of benzyl alcohol dehydrogenase in Acinetobacter calcoaceticus NCIB8250. J. Gen. Microbiol. 103: 127-140 (1977).

Belles JM, Garro R, Pallas V, Fayos J, Rodrigo I, Conejero V. Accumulation of gentisic acid as associated with systemic infections but not with the hypersensitive response in plant-pathogen interactions. Planta 223: 500-511 (2006).

Bernasconi P, Woodworth AR, Rosen BA, Subramanian MV, Siehl DL. A naturally occurring point mutation confers broad range tolerance to herbicides that target acetolactate synthase. J. Biol. Chem. 270: 17381-17385 (1995).

Bharali B, Bates JW. Detoxification of dissolved SO2 (bisulfite) by terricolous mosses. Ann. Bot. (Lond.) 97: 257-263 (2006).

Bhatti S, Colman B. Inorganic carbon acquisition in some synurophyte algae. Physiol. Plant. 133: 33-40 (2008).

Bi HH, Zeng RS, Su LM, An M, Luo SM. Rice allelopathy induced by methyl jasmonate and methyl salicylate. J. Chem. Ecol. 33: 1089-1103 (2007).

Biegert T, Altenschmidt U, Eckerskorn C, Fuchs G. Enzymes of anaerobic metabolism of phenolic compounds. 4-Hydroxybenzoate-CoA ligase from a denitrifying Pseudomonas species. Eur. J. Biochem. 213: 555-561 (1993).

Bird DA, Facchini PJ. Berberine bridge enzyme, a key branch-point enzyme in benzylisoquinoline alkaloid biosynthesis, contains a vacuolar sorting determinant. Planta 213: 888-897 (2001).

Bird DA, Franceschi VR, Facchini PJ. A tale of three cell types: alkaloid biosynthesis is localized to sieve elements in opium poppy. Plant Cell 15: 2626-2635 (2003).

Blagoeva E, Dobrev PI, Malbeck J, Motyka V, Strnad M, Hanus J, Vankova R. Cytokinin N-glucosylation inhibitors suppress deactivation of exogenous cytokinins in radish, but their effect on active endogenous cytokinins is counteracted by other regulatory mechanisms. Physiol. Plant. 121: 215-222 (2004).

Blasco F, Pommier J, Augier V, Chippaux M, Giordano G. Involvement of the narJ or narW gene product in the formation of active nitrate reductase in Escherichia coli. Mol. Microbiol. 6: 221-230 (1992).

Boatright J, Negre F, Chen X, Kish CM, Wood B, Peel G, Orlova I, Gang D, Rhodes D, Dudareva N. Understanding in vivo benzenoid metabolism in petunia petal tissue. Plant Physiol. 135: 1993-2011 (2004).

Boehlein SK, Walworth ES, Schuster SM. Identification of cysteine-523 in the aspartate binding site of Escherichia coli asparagine synthetase B. Biochemistry 36: 10168-10177 (1997).

Bomati EK, Noel JP. Structural and kinetic basis for substrate selectivity in Populus tremuloides sinapyl alcohol dehydrogenase. Plant Cell 17: 1598-1611 (2005).

Bongaerts R, Verpoorte R. HPLC assays for the chorismate utilizing enzymes chorismate pyruvate lyase and para-aminobenzoate synthase. J. Liq. Chromatogr. Relat. Technol. 23: 2703-2713 (2000).

Bornemann S, Ramjee MK, Balasubramanian S, Abell C, Coggins JR, Lowe DJ, Thorneley RN. Escherichia coli chorismate synthase catalyzes the conversion of (6S)-6-fluoro-5-enolpyruvylshikimate-3-phosphate to 6-fluorochorismate. Implications for the enzyme mechanism and the antimicrobial action of (6S)-6-fluoroshikimate. J. Biol. Chem. 270: 22811-22815 (1995).

Bozzo GG, Basset GJ, Naponelli V, Noiriel A, Gregory JF 3rd, Hanson AD. Characterization of the folate salvage enzyme p-aminobenzoylglutamate hydrolase in plants. Phytochemistry 69: 29-37 (2008).

Brader G, Mikkelsen MD, Halkier BA, Tapio Palva E. Altering glucosinolate profiles modulates disease resistance in plants. Plant J. 46: 758-767 (2006).

Bray HG, Thorpe WV, Wood PB. The fate of certain organic acids and amides in the rabbit. 12. Aminohydroxybenzoic acids. Biochem. J. 48: 394-399 (1951).

Brill EM, Abrahams S, Hayes CM, Jenkins CL, Watson JM. Molecular characterisation and expression of a wound-inducible cDNA encoding a novel cinnamyl-alcohol dehydrogenase enzyme in lucerne (Medicago sativa L.) Plant Mol. Biol. 41: 279-291 (1999).

Brincat MC, Gibson DM, Shuler ML. Alterations in Taxol production in plant cell culture via manipulation of the phenylalanine ammonia lyase pathway. Biotechnol. Prog. 18: 1149-1156 (2002).

Brock A, Herzfeld T, Paschke R, Koch M, Drager B. Brassicaceae contain nortropane alkaloids. Phytochemistry 67: 2050-2057 (2006).

Brophy JJ, Craig DC, Goldsack RJ, Fookes CJ, Leach DN, Waterman PG. Triumphalone, a diketone from the volatile oil of the leaves of Melaleuca triumphalis, and its spontaneous conversion into isotriumphalone. Phytochemistry 67: 2085-2089 (2006).

Brown PD, Tokuhisa JG, Reichelt M, Gershenzon J. Variation of glucosinolate accumulation among different organs and developmental stages of Arabidopsis thaliana. Phytochemistry 62: 471-481 (2003).

Buc J, Santini CL, Blasco F, Giordani R, Cardenas ML, Chippaux M, Cornish-Bowden A, Giordano G. Kinetic studies of a soluble alpha beta complex of nitrate reductase A from Escherichia coli. Use of various alpha beta mutants with altered beta subunits. Eur. J. Biochem. 234: 766-772 (1995).

Buchenau B, Thauer RK. Tetrahydrofolate-specific enzymes in Methanosarcina barkeri and growth dependence of this methanogenic archaeon on folic acid or p-aminobenzoic acid. Arch. Microbiol. 182: 313-325 (2004).

Burguiere L, Marion-Poll F, Cork A. Electrophysiological responses of female Helicoverpa armigera (Hubner) (Lepidoptera; Noctuidae) to synthetic host odours. J. Insect Physiol. 47: 509-514 (2001).

Burke JR, Witmer MR, Zusi FC, Gregor KR, Davern LB, Padmanabha R, Swann RT, Smith D, Tredup JA, Micanovic R, Manly SP, Villafranca JJ, Tramposch KM. Competitive, reversible inhibition of cytosolic phospholipase A2 at the lipid-water interface by choline derivatives that partially partition into the phospholipid bilayer. J. Biol. Chem. 274: 18864-18871 (1999).

Burow M, Bergner A, Gershenzon J, Wittstock U. Glucosinolate hydrolysis in Lepidium sativum--identification of the thiocyanate-forming protein. Plant Mol. Biol. 63: 49-61 (2007).

Burr SJ, Fry SC. Extracellular cross-linking of maize arabinoxylans by oxidation of feruloyl esters to form oligoferuloyl esters and ether-like bonds. Plant J. 58: 554-567 (2009).

Buvinger WE, Stone LC, Heath HE. Biochemical genetics of tryptophan synthesis in Pseudomonas acidovorans. J. Bacteriol. 147: 62-68 (1981).

Camas A, Cardenas L, Quinto C, Lara M. Expression of different calmodulin genes in bean (Phaseolus vulgaris L.): Role of nod factor on calmodulin gene regulation. Mol. Plant Microbe Interact. 15: 428-436 (2002).

Cao B, Loh KC. Catabolic pathways and cellular responses of Pseudomonas putida P8 during growth on benzoate with a proteomics approach. Biotechnol. Bioeng. 101: 1297-1312 (2008).

Caputo C, Criado MV, Roberts IN, Gelso MA, Barneix AJ. Regulation of glutamine synthetase 1 and amino acids transport in the phloem of young wheat plants. Plant Physiol. Biochem. 47: 335-342 (2009).

Carimi F, Zottini M, Costa A, Cattelan I, De Michele R, Terzi M, Lo Schiavo F. NO signalling in cytokinin-induced programmed cell death. Plant Cell Environ. 28: 1171-1178 (2005).

Carimi F, Zottini M, Formentin E, Terzi M, Lo Schiavo F. Cytokinins: new apoptotic inducers in plants. Planta 216: 413-421 (2003).

Carpin S, Crevecoeur M, Greppin H, Penel C. Molecular cloning and tissue-specific expression of an anionic peroxidase in zucchini. Plant Physiol. 120: 799-810 (1999).

Cary AJ, Liu W, Howell SH. Cytokinin action is coupled to ethylene in its effects on the inhibition of root and hypocotyl elongation in Arabidopsis thaliana seedlings. Plant Physiol. 107: 1075-1082 (1995).

Casano LM, Gomez LD, Lascano HR, Gonzalez CA, Trippi VS. Inactivation and degradation of CuZn-SOD by active oxygen species in wheat chloroplasts exposed to photooxidative stress. Plant Cell Physiol. 38: 433-440 (1997).

Cascao-Pereira LG, Hickel A, Radke CJ, Blanch HW. Interfacial versus homogeneous enzymatic cleavage of mandelonitrile by hydroxynitrile lyase in a biphasic system. Biotechnol. Bioeng. 83: 498-501 (2003).

Casino P, Niks D, Ngo H, Pan P, Brzovic P, Blumenstein L, Barends TR, Schlichting I, Dunn MF. Allosteric regulation of tryptophan synthase channeling: the internal aldimine probed by trans-3-indole-3'-acrylate binding. Biochemistry 46: 7728-7739 (2007).

Cedzich A, Stransky H, Schulz B, Frommer WB. Characterization of cytokinin and adenine transport in Arabidopsis cell cultures. Plant Physiol. 148: 1857-1867 (2008).

Chapman KD, Venables B, Markovic R, Blair Jr RW, Bettinger C. N-Acylethanolamines in seeds. Quantification of molecular species and their degradation upon imbibition. Plant Physiol. 120: 1157-1164 (1999).

Chen F, D'Auria JC, Tholl D, Ross JR, Gershenzon J, Noel JP, Pichersky E. An Arabidopsis thaliana gene for methylsalicylate biosynthesis, identified by a biochemical genomics approach, has a role in defense. Plant J. 36: 577-588 (2003).

Chen S, Halkier BA. Characterization of glucosinolate uptake by leaf protoplasts of Brassica napus. J. Biol. Chem. 275: 22955-22960 (2000).

Chen S, Petersen BL, Olsen CE, Schulz A, Halkier BA. Long-distance phloem transport of glucosinolates in Arabidopsis. Plant Physiol. 127: 194-201 (2001).

Chen W, Tang W, Lou L, Zhao W. Pregnane, coumarin and lupane derivatives and cytotoxic constituents from Helicteres angustifolia. Phytochemistry 67: 1041-1047 (2006).

Chien HF, Lin CC, Wang JW, Chen CT, Kao CH. Changes in ammonium ion content and glutamine synthetase activity in rice leaves caused by excess cadmium are a consequence of oxidative damage. Plant Growth Regul. 36: 41-47 (2002).

Cho SW, Cho EH, Hwang SH, Choi SY. Reactive cysteine residue of bovine brain glutamate dehydrogenase isoproteins. Mol. Cells 9: 91-98 (1999).

Choi YS, Zhang H, Brunzelle JS, Nair SK, Zhao H. In vitro reconstitution and crystal structure of p-aminobenzoate N-oxygenase (AurF) involved in aureothin biosynthesis. Proc. Natl. Acad. Sci. U.S.A. 105: 6858-6863 (2008).

Chong J, Baltz R, Schmitt C, Beffa R, Fritig B, Saindrenan P. Downregulation of a pathogen-responsive tobacco UDP-Glc:phenylpropanoid glucosyltransferase reduces scopoletin glucoside accumulation, enhances oxidative stress, and weakens virus resistance. Plant Cell 14: 1093-1107 (2002).

Chong J, Pierrel MA, Atanassova R, Werck-Reichhart D, Fritig B, Saindrenan P. Free and conjugated benzoic acid in tobacco plants and cell cultures. Induced accumulation upon elicitation of defense responses and role as salicylic acid precursors. Plant Physiol. 125: 318-328 (2001).

Choquet G, Jehan N, Pissavin C, Blanco C, Jebbar M. OusB, a broad-specificity ABC-type transporter from Erwinia chrysanthemi, mediates uptake of glycine betaine and choline with a high affinity. Appl. Environ. Microbiol. 71: 3389-3398 (2005).

Choudhary MI, Naheed N, Abbaskhan A, Musharraf SG, Siddiqui H, Atta-Ur-Rahman. Phenolic and other constituents of fresh water fern Salvinia molesta. Phytochemistry 69: 1018-1023 (2008).

Chrikishvili D, Sadunishvili T, Zaalishvili G. Benzoic acid transformation via conjugation with peptides and final fate of conjugates in higher plants. Ecotoxicol. Environ. Saf. 64: 390-399 (2006).

Christensen J, Jaroszewski JW. Natural glycosides containing allopyranose from the passion fruit plant and circular dichroism of benzaldehyde cyanohydrin glycosides. Org. Lett. 3: 2193-2195 (2001).

Cin VD, Danesin M, Boschetti A, Dorigoni A, Ramina A. Ethylene biosynthesis and perception in apple fruitlet abscission (Malus domestica L. Borck). J. Exp. Bot. 56: 2995-3005 (2005).

Cirilli R, Alcaro S, Fioravanti R, Secci D, Fiore S, La Torre F, Ortuso F. Unusually high enantioselectivity in high-performance liquid chromatography using cellulose tris(4-methylbenzoate) as a chiral stationary phase. J. Chromatogr. A. 1216: 4673-4678 (2009).

Clegg S, Yu F, Griffiths L, Cole JA. The roles of the polytopic membrane proteins NarK, NarU and NirC in Escherichia coli K-12: two nitrate and three nitrite transporters. Mol. Microbiol. 44: 143-155 (2002).

Coddington A. Biochemical studies on the nit mutants of Neurospora crassa. Mol. Gen. Genet. 145: 195-206 (1976).

Colrat S, Deswarte C, Latche A, Klaebe A, Bouzayen M, Fallot J, Roustan JP. Enzymatic detoxification of eutypine, a toxin from Eutypa lata, by Vitis vinifera cells: partial purification of an NADPH-dependent aldehyde reductase. Planta 207: 544-550 (1999).

Colrat S, Latche A, Guis M, Pech JC, Bouzayen M, Fallot J, Roustan JP. Purification and characterization of a NADPH-dependent aldehyde reductase from mung bean that detoxifies eutypine, a toxin from Eutypa lata. Plant Physiol. 119: 621-626 (1999).

Combourieu B, Elfoul L, Delort AM, Rabot S. Identification of new derivatives of sinigrin and glucotropaeolin produced by the human digestive microflora using H-1 NMR spectroscopy analysis of in vitro incubations. Drug Metab. Dispos. 29: 1440-1445 (2001).

Cona A, Cenci F, Cervelli M, Federico R, Mariottini P, Moreno S, Angelini R. Polyamine oxidase, a hydrogen peroxide-producing enzyme, is up-regulated by light and down-regulated by auxin in the outer tissues of the maize mesocotyl. Plant Physiol. 131: 803-813 (2003).

Coquoz JL, Buchala A, Metraux JP. The biosynthesis of salicylic acid in potato plants. Plant Physiol. 117: 1095-1101 (1998).

Corredoira E, Ballester A, Vieitez AM. Proliferation, maturation and germination of Castanea sativa Mill. Somatic embryos originated from leaf explants. Ann. Bot. (Lond.) 92: 129-136 (2003).

Cosquer A, Ficamos M, Jebbar M, Corbel JC, Choquet G, Fontenelle C, Uriac P, Bernard T. Antibacterial activity of glycine of betaine analogues: involvement osmoporters. Bioorg. Med. Chem. Lett. 14: 2061-2065 (2004).

Cousson A. Analysis of the sensing and transducing processes implicated in the stomatal responses to carbon dioxide in Commelina communis L. Plant Cell Environ. 23: 487-495 (2000).

Cowles CE, Nichols NN, Harwood CS. BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putida. J. Bacteriol. 182: 6339-6346 (2000).

Csupor D, Wenzig EM, Zupko I, Wolkart K, Hohmann J, Bauer R. Qualitative and quantitative analysis of aconitine-type and lipo-alkaloids of Aconitum carmichaelii roots. J. Chromatogr. A. 1216: 2079-2086 (2009).

Cui D, Neill SJ, Tang Z, Cai W. Gibberellin-regulated XET is differentially induced by auxin in rice leaf sheath bases during gravitropic bending. J. Exp. Bot. 56: 1327-1334 (2005).

D'Acunzo F, Galli C. First evidence of catalytic mediation by phenolic compounds in the laccase-induced oxidation of lignin models. Eur. J. Biochem. 270: 3634-3640 (2003).

D'Auria JC, Chen F, Pichersky E. Characterization of an acyltransferase capable of synthesizing benzylbenzoate and other volatile esters in flowers and damaged leaves of Clarkia breweri. Plant Physiol. 130: 466-476 (2002).

Davoodi J, Drown PM, Bledsoe RK, Wallin R, Reinhart GD, Hutson SM. Overexpression and characterization of the human mitochondrial and cytosolic branched-chain aminotransferases. J. Biol. Chem. 273: 4982-4989 (1998).

Davy A, Srensen MB, Svendsen I, Cameron-Mills V, Simpson DJ. Prediction of protein cleavage sites by the barley cysteine endoproteases EP-A and EP-B based on the kinetics of synthetic peptide hydrolysis. Plant Physiol. 122: 137-146 (2000).

Davy A, Svendsen I, Sorensen SO, Blom Sorensen M, Rouster J, Meldal M, Simpson DJ, Cameron-Mills V. Substrate specificity of barley cysteine endoproteases EP-A and EP-B. Plant Physiol. 117: 255-261 (1998).

De Bok FA, Hagedoorn PL, Silva PJ, Hagen WR, Schiltz E, Fritsche K, Stams AJ. Two W-containing formate dehydrogenases (CO2-reductases) involved in syntrophic propionate oxidation by Syntrophobacter fumaroxidans. Eur. J. Biochem. 270: 2476-2485 (2003).

de Crecy-Lagard V, El Yacoubi B, Diaz de la Garza R, Noiriel A, Hanson AD. Comparative genomics of bacterial and plant folate synthesis and salvage: predictions and validations. BMC Genomics 8: 245 (2007).

De La Garza RD, Quinlivan EP, Klaus SM, Basset GJ, Gregory JF 3rd, Hanson AD. Folate biofortification in tomatoes by engineering the pteridine branch of folate synthesis. Proc. Natl. Acad. Sci. U.S.A. 101: 13720-13725 (2004).

de la Rosa MA, Diez J, Vega JM, Losada M. Purification and properties of assimilatory nitrate reductase [NAD(P)H] from Ankistrodesmus braunii. Eur. J. Biochem. 106: 249-256 (1980).

De Lonlay P, Benelli C, Fouque F, Ganguly A, Aral B, Dionisi-Vici C, Touati G, Heinrichs C, Rabier D, Kamoun P, Robert JJ, Stanley C, Saudubray JM. Hyperinsulinism and hyperammonemia syndrome: report of twelve unrelated patients. Pediatr. Res. 50: 353-357 (2001).

de Marco A, Vigh L, Diamant S, Goloubinoff P. Native folding of aggregation-prone recombinant proteins in Escherichia coli by osmolytes, plasmid- or benzyl alcohol-overexpressed molecular chaperones. Cell. Stress Chaperones 10: 329-339 (2005).

De Simone O, Haase K, Muller E, Junk WJ, Hartmann K, Schreiber L, Schmidt W. Apoplasmic barriers and oxygen transport properties of hypodermal cell walls in roots from four Amazonian tree species. Plant Physiol. 132: 206-217 (2003).

Dean JV, Delaney SP. Metabolism of salicylic acid in wild-type, ugt74f1 and ugt74f2 glucosyltransferase mutants of Arabidopsis thaliana. Physiol. Plant. 132: 417-425 (2008).

Dean JV, Devarenne TP. Peroxidase-mediated conjugation of glutathione to unsaturated phenylpropanoids. Evidence against glutathione S-transferase involvement. Physiol. Plant. 99: 271-278 (1997).

Dean JV, Harper JE. The conversion of nitrite to nitrogen oxide(s) by the constitutive NAD(P)H-nitrate reductase enzyme from soybean. Plant Physiol. 88: 389-395 (1988).

Dean JV, Shah RP, Mohammed LA. Formation and vacuolar localization of salicylic acid glucose conjugates in soybean cell suspension cultures. Physiol. Plant. 118: 328-336 (2003).

Debreceni B, Farkas V, Fischer GM, Sandor A. Effect of aromatic ring-containing drugs on carnitine biosynthesis in rats with special regard to p-aminomethylbenzoic acid. Metabolism 54: 1582-1586 (2005).

Deetz JS, Luehr CA, Vallee BL. Human liver alcohol dehydrogenase isozymes: reduction of aldehydes and ketones. Biochemistry 23: 6822-6828 (1984).

Deikman J, Ulrich M. A novel cytokinin-resistant mutant of Arabidopsis with abbreviated shoot development. Planta 195: 440-449 (1995).

Delye C, Menchari Y, Michel S, Darmency H. Molecular bases for sensitivity to tubulin-binding herbicides in green foxtail. Plant Physiol. 136: 3920-3932 (2004).

DeMason DA, Chawla R. Roles for auxin during morphogenesis of the compound leaves of pea (Pisum sativum). Planta 218: 435-448 (2004).

Demura T, Fukuda H. Molecular cloning and characterization of cDNAs associated with tracheary element differentiation in cultured Zinnia cells. Plant Physiol. 103: 815-821 (1993).

Desgagne-Penix I, Eakanunkul S, Coles JP, Phillips AL, Hedden P, Sponsel VM. The auxin transport inhibitor response 3 (tir3) allele of BIG and auxin transport inhibitors affect the gibberellin status of Arabidopsis. Plant J. 41: 231-242 (2005).

Dexter RJ, Verdonk JC, Underwood BA, Shibuya K, Schmelz EA, Clark DG. Tissue-specific PhBPBT expression is differentially regulated in response to endogenous ethylene. J. Exp. Bot. 59: 609-618 (2008).

di Rigano VM, Vona V, Lobosco O, Carillo P, Lunn JE, Carfagna S, Esposito S, Caiazzo M, Rigano C. Temperature dependence of nitrate reductase in the psychrophilic unicellular alga Koliella antarctica and the mesophilic alga Chlorella sorokiniana. Plant Cell Environ. 29: 1400-1409 (2006).

Diaz de la Garza RI, Gregory JF 3rd, Hanson AD. Folate biofortification of tomato fruit. Proc. Natl. Acad. Sci. U.S.A. 104: 4218-4222 (2007).

Diaz-Vivancos P, Rubio M, Mesonero V, Periago PM, Ros Barcelo A, Martinez-Gomez P, Hernandez JA. The apoplastic antioxidant system in Prunus: response to long-term plum pox virus infection. J. Exp. Bot. 57: 3813-3824 (2006).

Dong JZ, Dunstan DI. Expression of abundant mRNAs during somatic embryogenesis of white spruce [Picea glauca (Moench) Voss] Planta 199: 459-466 (1996).

Dong L, Wang L, Zhang Y, Zhang Y, Deng X, Xue Y. An auxin-inducible F-box protein CEGENDUO negatively regulates auxin-mediated lateral root formation in Arabidopsis. Plant Mol. Biol. 60: 599-615 (2006).

Dotterl S, Wolfe LM, Jurgens A. Qualitative and quantitative analyses of flower scent in Silene latifolia. Phytochemistry 66: 203-213 (2005).

Drewes SE, van Vuuren SF. Antimicrobial acylphloroglucinols and dibenzyloxy flavonoids from flowers of Helichrysum gymnocomum. Phytochemistry 69: 1745-1749 (2008).

Driscoll JR, Taber HW. Sequence organization and regulation of the Bacillus subtilis menBE operon. J. Bacteriol. 174: 5063-5071 (1992).

Du L, Halkier BA. Isolation of a microsomal enzyme system involved in glucosinolate biosynthesis from seedlings of Tropaeolum majus L. Plant Physiol. 111: 831-837 (1996).

Du L, Lykkesfeldt J, Olsen CE, Halkier BA. Involvement of cytochrome P450 in oxime production in glucosinolate biosynthesis as demonstrated by an in vitro microsomal enzyme system isolated from jasmonic acid-induced seedlings of Sinapis alba L. Proc. Natl. Acad. Sci. U.S.A. 92: 12505-12509 (1995).

Du N, Pijut PM. Agrobacterium-mediated transformation of Fraxinus pennsylvanica hypocotyls and plant regeneration. Plant Cell Rep. 28: 915-923 (2009).

Dudareva N, D'Auria JC, Nam KH, Raguso RA, Pichersky E. Acetyl-CoA:benzylalcohol acetyltransferase--an enzyme involved in floral scent production in Clarkia breweri. Plant J. 14: 297-304 (1998).

Dudareva N, Martin D, Kish CM, Kolosova N, Gorenstein N, Faldt J, Miller B, Bohlmann J. (E)-beta-ocimene and myrcene synthase genes of floral scent biosynthesis in snapdragon: function and expression of three terpene synthase genes of a new terpene synthase subfamily. Plant Cell 15: 1227-1241 (2003).

Dudareva N, Murfitt LM, Mann CJ, Gorenstein N, Kolosova N, Kish CM, Bonham C, Wood K. Developmental regulation of methyl benzoate biosynthesis and emission in snapdragon flowers. Plant Cell 12: 949-961 (2000).

Dudareva N, Raguso RA, Wang J, Ross JR, Pichersky E. Floral scent production in Clarkia breweri. III. Enzymatic synthesis and emission of benzenoid esters. Plant Physiol. 116: 599-604 (1998).

Dunphy PJ. Location and biosynthesis of monoterpenyl fatty acyl esters in rose petals. Phytochemistry 67: 1110-1119 (2006).

Dwivedi UN, Shiraishi N, Campbell WH. Identification of an "essential" cysteine of nitrate reductase via mutagenesis of its recombinant cytochrome b reductase domain. J. Biol. Chem. 269: 13785-13791 (1994).

Eads JC, Beeby M, Scapin G, Yu TW, Floss HG. Crystal structure of 3-amino-5-hydroxybenzoic acid (AHBA) synthase. Biochemistry 38: 9840-9849 (1999).

Edman JC, Goldstein AL, Erbe JG. Para-aminobenzoate synthase gene of Saccharomyces cerevisiae encodes a bifunctional enzyme. Yeast 9: 669-675 (1993).

Effmert U, Saschenbrecker S, Ross J, Negre F, Fraser CM, Noel JP, Dudareva N, Piechulla B. Floral benzenoid carboxyl methyltransferases: from in vitro to in planta function. Phytochemistry 66: 1211-1230 (2005).

El-Sayed AM, Byers JA, Manning LM, Jurgens A, Mitchell VJ, Suckling DM. Floral scent of Canada thistle and its potential as a generic insect attractant. J. Econ. Entomol. 101: 720-727 (2008).

El-Sharkawy I, Manriquez D, Flores FB, Regad F, Bouzayen M, Latche A, Pech JC. Functional characterization of a melon alcohol acyl-transferase gene family involved in the biosynthesis of ester volatiles. Identification of the crucial role of a threonine residue for enzyme activity. Plant Mol. Biol. 59: 345-362 (2005).

Else MA, Janowiak F, Atkinson CJ, Jackson MB. Root signals and stomatal closure in relation to photosynthesis, chlorophyll a fluorescence and adventitious rooting of flooded tomato plants. Ann. Bot. (Lond.) 103: 313-323 (2009).

Else MA, Stankiewicz-Davies AP, Crisp CM, Atkinson CJ. The role of polar auxin transport through pedicels of Prunus avium L. in relation to fruit development and retention. J. Exp. Bot. 55: 2099-2109 (2004).

Elsemore DA, Ornston LN. The pca-pob supraoperonic cluster of Acinetobacter calcoaceticus contains quiA, the structural gene for quinate-shikimate dehydrogenase. J. Bacteriol. 176: 7659-7666 (1994).

Endler A, Martens S, Wellmann F, Matern U. Unusually divergent 4-coumarate:CoA-ligases from Ruta graveolens L. Plant Mol. Biol. 67: 335-346 (2008).

Engel S, Vyazmensky M, Geresh S, Barak Z, Chipman DM. Acetohydroxyacid synthase: A new enzyme for chiral synthesis of R-phenylacetylcarbinol. Biotechnol. Bioeng. 83: 833-840 (2003).

Enyedi AJ, Raskin I. Induction of UDP-glucose:salicylic acid glucosyltransferase activity in tobacco mosaic virus-inoculated tobacco (Nicotiana tabacum) leaves. Plant Physiol. 101: 1375-1380 (1993).

Epifano F, Genovese S, Menghini L, Curini M. Chemistry and pharmacology of oxyprenylated secondary plant metabolites. Phytochemistry 68: 939-953 (2007).

Ernest NJ, Weaver AK, Van Duyn LB, Sontheimer HW. Relative contribution of chloride channels and transporters to regulatory volume decrease in human glioma cells. Am. J. Physiol. Cell. Physiol. 288: C1451-C1460 (2005).

Essar DW, Eberly L, Crawford IP. Evolutionary differences in chromosomal locations of four early genes of the tryptophan pathway in fluorescent pseudomonads: DNA sequences and characterization of Pseudomonas putida trpE and trpGDC. J. Bacteriol. 172: 867-883 (1990).

Eudes A, Bozzo GG, Waller JC, Naponelli V, Lim EK, Bowles DJ, Gregory JF 3rd, Hanson AD. Metabolism of the folate precursor p-aminobenzoate in plants: glucose ester formation and vacuolar storage. J. Biol. Chem. 283: 15451-15459 (2008).

Facchini PJ. Alkaloid biosynthesis in plants: biochemistry, cell biology, molecular regulation, and metabolic engineering applications. Annu. Rev. Plant Physiol. Plant Mol. Biol. 52: 29-66 (2001).

Facchini PJ, De Luca V. Opium poppy and Madagascar periwinkle: model non-model systems to investigate alkaloid biosynthesis in plants. Plant J. 54: 763-784 (2008).

Facchini PJ, Huber-Allanach KL, Tari LW. Plant aromatic L-amino acid decarboxylases: evolution, biochemistry, regulation, and metabolic engineering applications. Phytochemistry 54: 121-138 (2000).

Facchini PJ, Loukanina N, Blanche V. Genetic transformation via somatic embryogenesis to establish herbicide-resistant opium poppy. Plant Cell Rep. 27: 719-727 (2008).

Facchini PJ, Penzes-Yost C, Samanani N, Kowalchuk B. Expression patterns conferred by tyrosine/dihydroxyphenylalanine decarboxylase promoters from opium poppy are conserved in transgenic tobacco. Plant Physiol. 118: 69-81 (1998).

Farhi M, Dudareva N, Masci T, Weiss D, Vainstein A, Abeliovich H. Synthesis of the food flavoring methyl benzoate by genetically engineered Saccharomyces cerevisiae. J. Biotechnol. 122: 307-315 (2006).

Farmer MJ, Czernic P, Michael A, Negrel J. Identification and characterization of cDNA clones encoding hydroxycinnamoyl-CoA:tyramine N-hydroxycinnamoyltransferase from tobacco. Eur. J. Biochem. 263: 686-694 (1999).

Fast B, Lindgren P, Gotz F. Cloning, sequencing, and characterization of a gene (narT) encoding a transport protein involved in dissimilatory nitrate reduction in Staphylococcus carnosus. Arch. Microbiol. 166: 361-367 (1996).

Fei HM, Vessey JK. Further investigation of the roles of auxin and cytokinin in the NH4+-induced stimulation of nodulation using white clover transformed with the auxin-sensitive reporter GH3 : gusA. Physiol. Plant. 121: 674-681 (2004).

Fernandez E, Cardenas J. In vitro complementation of assimilatory NAD(P)H-nitrate reductase from mutants of Chlamydomonas reinhardii. Biochim. Biophys. Acta 657: 1-12 (1981).

Flores N, Jimenez IA, Gimenez A, Ruiz G, Gutierrez D, Bourdy G, Bazzocchi IL. Antiparasitic activity of prenylated benzoic acid derivatives from Piper species. Phytochemistry 70: 621-627 (2009).

Flury T, Wagner E, Kreuz K. An inducible glutathione S-transferase in soybean hypocotyl is localized in the apoplast. Plant Physiol. 112: 1185-1190 (1996).

Fode B, Siemsen T, Thurow C, Weigel R, Gatz C. The Arabidopsis GRAS protein SCL14 interacts with class II TGA transcription factors and is essential for the activation of stress-inducible promoters. Plant Cell 20: 3122-3135 (2008).

Forchhammer K, Hedler A. Phosphoprotein PII from cyanobacteria--analysis of functional conservation with the PII signal-transduction protein from Escherichia coli. Eur. J. Biochem. 244: 869-875 (1997).

Forsthoefel NR, Cushman MA, Cushman JC. Posttranscriptional and posttranslational control of enolase expression in the facultative Crassulacean acid metabolism plant Mesembryanthemum crystallinum L. Plant Physiol. 108: 1185-1195 (1995).

Foster SJ, Kraus RJ, Ganther HE. Formation of dimethyl selenide and trimethylselenonium from selenobetaine in the rat. Arch. Biochem. Biophys. 247: 12-19 (1986).

Foster WB, Griffith MJ, Kingdon HS. Affinity labeling of the active site of Escherichia coli glutamine synthetase by 5'-p-fluorosulfonylbenzoyladenosine. J. Biol. Chem. 256: 882-886 (1981).

Fraissinet-Tachet L, Baltz R, Chong J, Kauffmann S, Fritig B, Saindrenan P. Two tobacco genes induced by infection, elicitor and salicylic acid encode glucosyltransferases acting on phenylpropanoids and benzoic acid derivatives, including salicylic acid. FEBS Lett. 437: 319-323 (1998).

Francis F, Lognay G, Wathelet JP, Haubruge E. Characterisation of aphid myrosinase and degradation studies of glucosinolates. Arch. Insect Biochem. Physiol. 50: 173-182 (2002).

Frey PA. Radical mechanisms of enzymatic catalysis. Annu. Rev. Biochem. 70: 121-148 (2001).

Frick S, Kutchan TM. Molecular cloning and functional expression of O-methyltransferases common to isoquinoline alkaloid and phenylpropanoid biosynthesis. Plant J. 17: 329-339 (1999).

Fu J, Zuo L, Yang J, Chen R, Zhang D. Oligosaccharide polyester and triterpenoid saponins from the roots of Polygala japonica. Phytochemistry 69: 1617-1624 (2008).

Fuhrs H, Gotze S, Specht A, Erban A, Gallien S, Heintz D, Van Dorsselaer A, Kopka J, Braun HP, Horst WJ. Characterization of leaf apoplastic peroxidases and metabolites in Vigna unguiculata in response to toxic manganese supply and silicon. J. Exp. Bot. 60: 1663-1678 (2009).

Fujita N, Kubo A, Francisco PB Jr, Nakakita M, Harada K, Minaka N, Nakamura Y. Purification, characterization, and cDNA structure of isoamylase from developing endosperm of rice. Planta 208: 283-293 (1999).

Fussel U, Dotterl S, Jurgens A, Aas G. Inter- and intraspecific variation in floral scent in the genus Salix and its implication for pollination. J. Chem. Ecol. 33: 749-765 (2007).

Galis I, Simek P, Macas J, Zahradnickova H, Vlasak J, Wabiko H, Van Dongen W, Van Onckelen HA, Ondrej M. The Agrobacterium tumefaciens C58-6b gene confers resistance to N(6)-benzyladenine without modifying cytokinin metabolism in tobacco seedlings. Planta 209: 453-461 (1999).

Gang DR, Kasahara H, Xia ZQ, Vander Mijnsbrugge K, Bauw G, Boerjan W, Van Montagu M, Davin LB, Lewis NG. Evolution of plant defense mechanisms. Relationships of phenylcoumaran benzylic ether reductases to pinoresinol-lariciresinol and isoflavone reductases. J. Biol. Chem. 274: 7516-7527 (1999).

Gasowska B, Wojtasek H, Hurek J, Drag M, Nowak K, Kafarski P. Redox reaction between amino-(3,4-dihydroxyphenyl)methyl phosphonic acid and dopaquinone is responsible for the apparent inhibitory effect on tyrosinase. Eur. J. Biochem. 269: 4098-4104 (2002).

Geisler M, Blakeslee JJ, Bouchard R, Lee OR, Vincenzetti V, Bandyopadhyay A, Titapiwatanakun B, Peer WA, Bailly A, Richards EL, Ejendal KF, Smith AP, Baroux C, Grossniklaus U, Muller A, Hrycyna CA, Dudler R, Murphy AS, Martinoia E. Cellular efflux of auxin catalyzed by the Arabidopsis MDR/PGP transporter AtPGP1. Plant J. 44: 179-194 (2005).

Geissler R, Brandt W, Ziegler J. Molecular modeling and site-directed mutagenesis reveal the benzylisoquinoline binding site of the short-chain dehydrogenase/reductase salutaridine reductase. Plant Physiol. 143: 1493-1503 (2007).

Genchi G, Spagnoletta A, De Santis A, Stefanizzi L, Palmieri F. Purification and characterization of the reconstitutively active citrate carrier from maize mitochondria. Plant Physiol. 120: 841-848 (1999).

Georg GI, Cheruvallath ZS, Himes RH, Mejillano MR, Burke CT. Synthesis of biologically active taxol analogues with modified phenylisoserine side chains. J. Med. Chem. 35: 4230-4237 (1992).

Gillooly DJ, Robertson AG, Fewson CA. Molecular characterization of benzyl alcohol dehydrogenase and benzaldehyde dehydrogenase II of Acinetobacter calcoaceticus. Biochem. J. 330: 1375-1381 (1998).

Giordano G, Violet M, Medani CL, Pommier J. A common pathway for the activation of several molybdoenzymes in Escherichia coli K12. Biochim. Biophys. Acta 798: 216-225 (1984).

Glass-Marmor L, Beitner R. Taxol (paclitaxel) induces a detachment of phosphofructokinase from cytoskeleton of melanoma cells and decreases the levels of glucose 1,6-bisphosphate, fructose 1,6-bisphosphate and ATP. Eur. J. Pharmacol. 370: 195-199 (1999).

Glassgen WE, Rose A, Madlung J, Koch W, Gleitz J, Seitz HU. Regulation of enzymes involved in anthocyanin biosynthesis in carrot cell cultures in response to treatment with ultraviolet light and fungal elicitors. Planta 204: 490-498 (1998).

Goffner D, Van Doorsselaere J, Yahiaoui N, Samaj J, Grima-Pettenati J, Boudet AM. A novel aromatic alcohol dehydrogenase in higher plants: molecular cloning and expression. Plant Mol. Biol. 36: 755-765 (1998).

Goodwin SM, Kolosova N, Kish CM, Wood KV, Dudareva N, Jenks MA. Cuticle characteristics and volatile emissions of petals in Antirrhinum majus. Physiol. Plant. 117: 435-443 (2003).

Goyal A, Wang XG, Engel PC. Allosteric behaviour of 1 : 5 hybrids of mutant subunits of Clostridium symbiosum glutamate dehydrogenase differing in their amino acid specificity. Biochem. J. 360: 651-656 (2001).

Graham SB, Stephenson JT, Wood JM. Proline dehydrogenase from Escherichia coli K12. Reconstitution of a functional membrane association. J. Biol. Chem. 259: 2656-2661 (1984).

Graser G, Oldham NJ, Brown PD, Temp U, Temp U, Gershenzon J. The biosynthesis of benzoic acid glucosinolate esters in Arabidopsis thaliana. Phytochemistry 57: 23-32 (2001).

Grossmann K, Kwiatkowski J, Tresch S. Auxin herbicides induce H2O2 overproduction and tissue damage in cleavers (Galium aparine L.). J. Exp. Bot. 52: 1811-1816 (2001).

Grun F, Venkatesan RN, Tabb MM, Zhou C, Cao J, Hemmati D, Blumberg B. Benzoate X receptors alpha and beta are pharmacologically distinct and do not function as xenobiotic receptors. J. Biol. Chem. 277: 43691-43697 (2002).

Gueta-Dahan Y, Avsian-Kretchmer O, Ben-Hayyim G. The involvement of calcium in the regulation of GPX1 expression. Planta 228: 725-734 (2008).

Guillen P, Guis M, Martinez-Reina G, Colrat S, Dalmayrac S, Deswarte C, Bouzayen M, Roustan JP, Fallot J, Pech JC, Latche A. A novel NADPH-dependent aldehyde reductase gene from Vigna radiata confers resistance to the grapevine fungal toxin eutypine. Plant J. 16: 335-343 (1998).

Guillet G, Poupart J, Basurco J, De Luca V. Expression of tryptophan decarboxylase and tyrosine decarboxylase genes in tobacco results in altered biochemical and physiological phenotypes. Plant Physiol. 122: 933-944 (2000).

Guo YF, Chen FJ, Zhang FS, Mi GH. Auxin transport from shoot to root is involved in the response of lateral root growth to localized supply of nitrate in maize. Plant Sci. 169: 894-900 (2005).

Gushwa NN, Hayashi D, Kemper A, Abram B, Taylor JE, Upton J, Tay CF, Fiedler S, Pullen S, Miller LP, Tallman G. Thermotolerant guard cell protoplasts of tree tobacco do not require exogenous hormones to survive in culture and are blocked from reentering the cell cycle at the G1-to-S transition. Plant Physiol. 132: 1925-1940 (2003).

Guterman I, Masci T, Chen X, Negre F, Pichersky E, Dudareva N, Weiss D, Vainstein A. Generation of phenylpropanoid pathway-derived volatiles in transgenic plants: rose alcohol acetyltransferase produces phenylethyl acetate and benzyl acetate in petunia flowers. Plant Mol. Biol. 60: 555-563 (2006).

Haba H, Lavaud C, Harkat H, Alabdul Magid A, Marcourt L, Benkhaled M. Diterpenoids and triterpenoids from Euphorbia guyoniana. Phytochemistry 68: 1255-1260 (2007).

Hagel JM, Weljie AM, Vogel HJ, Facchini PJ. Quantitative 1H NMR metabolite profiling as a functional genomics platform to investigate alkaloid biosynthesis in opium poppy. Plant Physiol. 147: 1805-1821 (2008).

Hall D, De Luca V. Mesocarp localization of a bi-functional resveratrol/hydroxycinnamic acid glucosyltransferase of Concord grape (Vitis labrusca). Plant J. 49: 579-591 (2007).

Hammack L, Petroski RJ. Field capture of northern and western corn rootworm beetles relative to attractant structure and volatility. J. Chem. Ecol. 30: 1809-1825 (2004).

Han BY, Chen ZM. Composition of the volatiles from intact and mechanically pierced tea aphid-tea shoot complexes and their attraction to natural enemies of the tea aphid. J. Agric. Food Chem. 50: 2571-2575 (2002).

Hansen H, Grossmann K. Auxin-induced ethylene triggers abscisic acid biosynthesis and growth inhibition. Plant Physiol. 124: 1437-1448 (2000).

Harput US, Varel M, Nagatsu A, Saracoglu I. Acylated iridoid glucosides from Veronica anagallis-aquatica. Phytochemistry 65: 2135-2139 (2004).

Harrison LG, Von Aderkas P. Spatially quantitative control of the number of cotyledons in a clonal population of somatic embryos of hybrid larch Larix x leptoeuropaea. Ann. Bot. (Lond.) 93: 423-434 (2004).

Hasegawa T, Tanaka A, Hosoda A, Takano F, Ohta T. Antioxidant C-glycosyl flavones from the leaves of Sasa kurilensis var. gigantea. Phytochemistry 69: 1419-1424 (2008).

Hawkins SW, Boudet AM. Purification and characterization of cinnamyl alcohol dehydrogenase isoforms from the periderm of Eucalyptus gunnii Hook. Plant Physiol. 104: 75-84 (1994).

Hayden BM, Dean JL, Martin SR, Engel PC. Chemical rescue of the catalytically disabled clostridial glutamate dehydrogenase mutant D165S by fluoride ion. Biochem. J. 340: 555-560 (1999).

Heacock AM, Foster DJ, Fisher SK. Prostanoid receptors regulate the volume-sensitive efflux of osmolytes from murine fibroblasts via a cyclic AMP-dependent mechanism. J. Pharmacol. Exp. Ther. 319: 963-971 (2006).

Heide L. Chapter 12. Expression of the Bacterial ubiC Gene Opens a New Biosynthetic Pathway in Plants. In "Metabolic Engineering of Plant Secondary Metabolism" (Verpoorte R, Alfermann AW, eds), Kluwer Academic Publishers, Dortrecht, The Netherlands, pp. 233-251 (2000).

Hernandez JA, Díaz-Vivancos P, Rubio M, Olmos E, Ros-Barcelo A, Martinez-Gomez P. Long-term plum pox virus infection produces an oxidative stress in a susceptible apricot, Prunus armeniaca, cultivar but not in a resistant cultivar. Physiol. Plant. 126: 140-152 (2006).

Hernandez JA, Rubio M, Olmos E, Ros-Barcelo A, Martinez-Gomez P. Oxidative stress induced by long-term plum pox virus infection in peach (Prunus persica). Physiol. Plant. 122: 486-495 (2004).

Hertewich UM, Zapp J, Becker H. Secondary metabolites from the liverwort Jamesoniella colorata. Phytochemistry 63: 227-233 (2003).

Hertweck C, Jarvis AP, Xiang L, Moore BS, Oldham NJ. A mechanism of benzoic acid biosynthesis in plants and bacteria that mirrors fatty acid beta-oxidation. Chembiochem. 2: 784-786 (2001).

Hertweck C, Jarvis AP, Xiang LK, Moore BS, Oldham NJ. A mechanism of benzoic acid biosynthesis in plants and bacteria that mirrors fatty acid beta-oxidation. Chembiochem. 2: 784-787 (2001).

Hertweck C, Moore BS. A plant-like biosynthesis of benzoyl-CoA in the marine bacterium 'Streptomyces maritimus'. Tetrahedron 56: 9115-9120 (2000).

Hewala II. Gas-liquid chromatographic and difference spectrophotometric techniques for the determination of benzaldehyde in benzyl alcohol. J. Pharm. Biomed. Anal. 12: 73-79 (1994).

Hirayama C, Saito H, Konno K, Shinbo H. Purification and characterization of NADH-dependent glutamate synthase from the silkworm fat body (Bombyx mori). Insect Biochem. Mol. Biol. 28: 473-482 (1998).

Hirose N, Makita N, Yamaya T, Sakakibara H. Functional characterization and expression analysis of a gene, OsENT2, encoding an equilibrative nucleoside transporter in rice suggest a function in cytokinin transport. Plant Physiol. 138: 196-206 (2005).

Hoang Anh NT, Van Sung T, Porzel A, Franke K, Wessjohann LA. Homoisoflavonoids from Ophiopogon japonicus Ker-Gawler. Phytochemistry 62: 1153-1158 (2003).

Hoballah ME, Stuurman J, Turlings TC, Guerin PM, Connetable S, Kuhlemeier C. The composition and timing of flower odour emission by wild Petunia axillaris coincide with the antennal perception and nocturnal activity of the pollinator Manduca sexta. Planta 222: 141-150 (2005).

Hoffmann T, Frankenberg N, Marino M, Jahn D. Ammonification in Bacillus subtilis utilizing dissimilatory nitrite reductase is dependent on resDE. J. Bacteriol. 180: 186-189 (1998).

Holmgren A, Norgren M, Zhang L, Henriksson G. On the role of the monolignol gamma-carbon functionality in lignin biopolymerization. Phytochemistry 70: 147-155 (2009).

Horiuchi J, Badri DV, Kimball BA, Negre F, Dudareva N, Paschke MW, Vivanco JM. The floral volatile, methyl benzoate, from snapdragon (Antirrhinum majus) triggers phytotoxic effects in Arabidopsis thaliana. Planta 226: 1-10 (2007).

Hsieh MH, Goodman HM. A novel gene family in Arabidopsis encoding putative heptahelical transmembrane proteins homologous to human adiponectin receptors and progestin receptors. J. Exp. Bot. 56: 3137-3147 (2005).

Hsieh MH, Goodman HM. Molecular characterization of a novel gene family encoding ACT domain repeat proteins in Arabidopsis. Plant Physiol. 130: 1797-1806 (2002).

Hu Z, Hunziker D, Hutchinson CR, Khosla C. A host-vector system for analysis and manipulation of rifamycin polyketide biosynthesis in Amycolatopsis mediterranei. Microbiology 145: 2335-2341 (1999).

Huang TS, Anzellotti D, Dedaldechamp F, Ibrahim RK. Partial purification, kinetic analysis, and amino acid sequence information of a flavonol 3-O-methyltransferase from Serratula tinctoria. Plant Physiol. 134: 1366-1376 (2004).

Huber FK, Kaiser R, Sauter W, Schiestl FP. Floral scent emission and pollinator attraction in two species of Gymnadenia (Orchidaceae). Oecologia 142: 564-575 (2005).

Hund HK, Bar G, Lingens F. Purification and properties of arogenate dehydrogenase from Actinoplanes missouriensis. Z. Naturforsch. [C] 44: 797-801 (1989).

Hung KT, Kao CH. The participation of hydrogen peroxide in methyl jasmonate-induced NH(4)(+) accumulation in rice leaves. J. Plant Physiol. 164: 1469-1479 (2007).

Hussein SA, Hashim AN, El-Sharawy RT, Seliem MA, Linscheid M, Lindequist U, Nawwar MA. Ericifolin: an eugenol 5-O-galloylglucoside and other phenolics from Melaleuca ericifolia. Phytochemistry 68: 1464-1470 (2007).

Ibdah M, Chen YT, Wilkerson CG, Pichersky E. An aldehyde oxidase in developing seeds of Arabidopsis converts benzaldehyde to benzoic acid. Plant Physiol. 150: 416-423 (2009).

Ikezawa N, Iwasa K, Sato F. CYP719A subfamily of cytochrome P450 oxygenases and isoquinoline alkaloid biosynthesis in Eschscholzia californica. Plant Cell Rep. 28: 123-133 (2009).

Imeson HC, Zheng L-l, Cossins EA. Folylpolyglutamate derivatives of Pisum sativum L. Determination of polyglutamate chain lengths by high performance liquid chromatography following conversion to p-aminobenzoylpolyglutamates. Plant Cell Physiol. 31: 223-231 (1990).

Imin N, Nizamidin M, Daniher D, Nolan KE, Rose RJ, Rolfe BG. Proteomic analysis of somatic embryogenesis in Medicago truncatula. Explant cultures grown under 6-benzylaminopurine and 1-naphthaleneacetic acid treatments. Plant Physiol. 137: 1250-1260 (2005).

Ivanov AE, Edink E, Kumar A, Galaev IY, Arendsen AF, Bruggink A, Mattiasson B. Conjugation of penicillin acylase with the reactive copolymer of N-isopropylacrylamide: a step toward a thermosensitive industrial biocatalyst. Biotechnol. Prog. 19: 1167-1175 (2003).

Iwamoto K, Kawanobe H, Ikawa T, Shiraiwa Y. Characterization of salt-regulated mannitol-1-phosphate dehydrogenase in the red alga Caloglossa continua. Plant Physiol. 133: 893-900 (2003).

Iwasa K, Doi Y, Takahashi T, Cui W, Nishiyama Y, Tode C, Moriyasu M, Takeda K, Minami H, Ikezawa N, Sato F. Enantiomeric separation of racemic 1-benzyl-N-methyltetrahydroisoquinolines on chiral columns and chiral purity determinations of the O-methylated metabolites in plant cell cultures by HPLC-CD on-line coupling in combination with HPLC-MS. Phytochemistry 70: 198-206 (2009).

Jacquot JP, Rivera-Madrid R, Marinho P, Kollarova M, Le Marechal P, Miginiac-Maslow M, Meyer Y. Arabidopsis thaliana NAPHP thioredoxin reductase. cDNA characterization and expression of the recombinant protein in Escherichia coli. J. Mol. Biol. 235: 1357-1363 (1994).

Jain A, Ziegler J, Liscombe DK, Facchini PJ, Tucker PA, Panjikar S. Purification, crystallization and X-ray diffraction analysis of pavine N-methyltransferase from Thalictrum flavum. Acta Crystallogr. Sect. F. Struct. Biol. Cryst. Commun. 64: 1066-1069 (2008).

James TY, Boulianne RP, Bottoli APF, Granado JD, Aebi M, Kues U. The pab1 gene of Coprinus cinereus encodes a bifunctional protein for para-aminobenzoic acid (PABA) synthesis: implications for the evolution of fused PABA synthases. J. Basic Microbiol. 42: 91-103 (2002).

Jang DS, Su BN, Pawlus AD, Kang YH, Kardono LB, Riswan S, Afriastini JJ, Fong HH, Pezzuto JM, Kinghorn AD. Beccaridiol, an unusual 28-nortriterpenoid from the leaves of Diplectria beccariana. Phytochemistry 67: 1832-1837 (2006).

Jarvis AP, Schaaf O, Oldham NJ. 3-Hydroxy-3-phenylpropanoic acid is an intermediate in the biosynthesis of benzoic acid and salicylic acid but benzaldehyde is not. Planta 212: 119-126 (2000).

Jerkovic I, Mastelic J, Marijanovic Z. A variety of volatile compounds as markers in unifloral honey from dalmatian sage (Salvia officinalis L.). Chem. Biodivers. 3: 1307-1316 (2006).

Jhee KH, Yoshimura T, Miles EW, Takeda S, Miyahara I, Hirotsu K, Soda K, Kawata Y, Esaki N. Stereochemistry of the transamination reaction catalyzed by aminodeoxychorismate lyase from Escherichia coli: close relationship between fold type and stereochemistry. J. Biochem. (Tokyo) 128: 679-686 (2000).

Jones PR, Moller BL, Hoj PB. The UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase that catalyzes the last step in synthesis of the cyanogenic glucoside dhurrin in Sorghum bicolor. Isolation, cloning, heterologous expression, and substrate specificity. J. Biol. Chem. 274: 35483-35491 (1999).

Jorgensen U, Hansen M, Christensen LP, Jensen K, Kaack K. Olfactory and quantitative analysis of aroma compounds in elder flower (Sambucus nigra L.) drink processed from five cultivars. J. Agric. Food Chem. 48: 2376-2383 (2000).

Jurgens A, Webber AC, Gottsberger G. Floral scent compounds of Amazonian Annonaceae species pollinated by small beetles and thrips. Phytochemistry 55: 551-558 (2000).

Kaneyasu T, Kobayashi A, Nakayama M, Fujii N, Takahashi H, Miyazawa Y. Auxin response, but not its polar transport, plays a role in hydrotropism of Arabidopsis roots. J. Exp. Bot. 58: 1143-1150 (2007).

Karamloo F, Wangorsch A, Kasahara H, Davin LB, Haustein D, Lewis NG, Vieths S. Phenylcoumaran benzylic ether and isoflavonoid reductases are a new class of cross-reactive allergens in birch pollen, fruits and vegetables. Eur. J. Biochem. 268: 5310-5320 (2001).

Katerere DR, Gray AI, Kennedy AR, Nash RJ, Waigh RD. Cyclobutanes from Combretum albopunctatum. Phytochemistry 65: 433-438 (2004).

Kathmann EC, Naylor S, Lipsky JJ. Rat liver constitutive and phenobarbital-inducible cytosolic aldehyde dehydrogenases are highly homologous proteins that function as distinct isozymes. Biochemistry 39: 11170-11176 (2000).

Kato M, Mizuno K. Caffeine synthase and related methyltransferases in plants. Front. Biosci. 9: 1833-1842 (2004).

Kato N, Dubouzet E, Kokabu Y, Yoshida S, Taniguchi Y, Dubouzet JG, Yazaki K, Sato F. Identification of a WRKY protein as a transcriptional regulator of benzylisoquinoline alkaloid biosynthesis in Coptis japonica. Plant Cell Physiol. 48: 8-18 (2007).

Kauss H, Franke R, Krause K, Conrath U, Jeblick W, Grimmig B, Matern U. Conditioning of parsley (Petroselinum crispum L.) suspension cells increases elicitor-induced incorporation of cell wall phenolics. Plant Physiol. 102: 459-466 (1993).

Kaya-Celiker H, Angardi V, Calik P. Regulatory effects of oxygen transfer on overexpression of recombinant benzaldehyde lyase production by Escherichia coli BL21 (DE3). Biotechnol J. 4: 1066-1076 (2009).

Keller CP, Stahlberg R, Barkawi LS, Cohen JD. Long-term inhibition by auxin of leaf blade expansion in bean and Arabidopsis. Plant Physiol. 134: 1217-1226 (2004).

Kelley M, Vessey DA. Interaction of 2,4-dichlorophenoxyacetate (2,4-D) and 2,4,5-trichlorophenoxyacetate (2,4,5-T) with the acyl-CoA: amino acid N-acyltransferase enzymes of bovine liver mitochondria. Biochem. Pharmacol. 35: 289-295 (1986).

Kerr EM, Fry SC. Extracellular cross-linking of xylan and xyloglucan in maize cell-suspension cultures: the role of oxidative phenolic coupling. Planta 219: 73-83 (2004).

Kessler D, Baldwin IT. Making sense of nectar scents: the effects of nectar secondary metabolites on floral visitors of Nicotiana attenuata. Plant J. 49: 840-854 (2007).

Kessler D, Gase K, Baldwin IT. Field experiments with transformed plants reveal the sense of floral scents. Science 321: 1200-1202 (2008).

Khan MM, Jan A, Karibe H, Komatsu S. Identification of phosphoproteins regulated by gibberellin in rice leaf sheath. Plant Mol. Biol. 58: 27-40 (2005).

Kiddle GA, Bennett RN, Hick AJ, Wallsgrove RM. C-S lyase activities in leaves of crucifers and non-crucifers, and the characterization of three classes of C-S lyase activities from oilseed rape (Brassica napus L.). Plant Cell Environ. 22: 433-445 (1999).

Kiene RP. Uptake of choline and its conversion to glycine betaine by bacteria in estuarine waters. Appl. Environ. Microbiol. 64: 1045-1051 (1998).

Kim DK, Zee OP. A new cyanogenic glycoside from Sorbaria sorbifolia var. stellipila. Chem. Pharm. Bull. (Tokyo) 48: 1766-1767 (2000).

Kim DS, Churchich JE. The reversible oxidation of vicinal SH groups in 4-aminobutyrate aminotransferase. Probes of conformational changes. J. Biol. Chem. 262: 14250-14254 (1987).

Kim HR, Rho HW, Park JW, Park BH, Kim JS, Lee MW. Assay of ornithine aminotransferase with ninhydrin. Anal. Biochem. 223: 205-207 (1994).

Kim HU, van Oostende C, Basset GJ, Browse J. The AAE14 gene encodes the Arabidopsis O-succinylbenzoyl-CoA ligase that is essential for phylloquinone synthesis and photosystem-I function. Plant J. 54: 272-283 (2008).

Kim SK, Chang SC, Lee EJ, Chung WS, Kim YS, Hwang S, Lee JS. Involvement of brassinosteroids in the gravitropic response of primary root of maize. Plant Physiol. 123: 997-1004 (2000).

Kim YT, Churchich JE. Sequence of the cysteinyl-containing peptides of 4-aminobutyrate aminotransferase. Identification of sulfhydryl residues involved in intersubunit linkage. Eur. J. Biochem. 181: 397-401 (1989).

Kinouchi T, Nishio H, Nishiuchi Y, Tsunemi M, Takada K, Hamamoto T, Kagawa Y, Fujii N. Isolation and characterization of mammalian D-aspartyl endopeptidase. Amino Acids 32: 79-85 (2007).

Kiyosue T, Yamaguchi-Shinozaki K, Shinozaki K. Characterization of two cDNAs (ERD11 and ERD13) for dehydration-inducible genes that encode putative glutathione S-transferases in Arabidopsis thaliana L. FEBS Lett. 335: 189-192 (1993).

Kleinherenbrink FA, Chiou HC, LoBrutto R, Blankenship RE. Spectroscopic evidence for the presence of an iron-sulfur center similar to Fx of Photosystem I in Heliobacillus mobilis. Photosynth. Res. 41: 115-123 (1994).

Kliebenstein DJ, D'Auria JC, Behere AS, Kim JH, Gunderson KL, Breen JN, Lee G, Gershenzon J, Last RL, Jander G. Characterization of seed-specific benzoyloxyglucosinolate mutations in Arabidopsis thaliana. Plant J. 51: 1062-1076 (2007).

Koeduka T, Fridman E, Gang DR, Vassao DG, Jackson BL, Kish CM, Orlova I, Spassova SM, Lewis NG, Noel JP, Baiga TJ, Dudareva N, Pichersky E. Eugenol and isoeugenol, characteristic aromatic constituents of spices, are biosynthesized via reduction of a coniferyl alcohol ester. Proc. Natl. Acad. Sci. U.S.A. 103: 10128-10133 (2006).

Koeduka T, Orlova I, Baiga TJ, Noel JP, Dudareva N, Pichersky E. The lack of floral synthesis and emission of isoeugenol in Petunia axillaris subsp. parodii is due to a mutation in the isoeugenol synthase gene. Plant J. 58: 961-969 (2009).

Koiwai H, Akaba S, Seo M, Komano T, Koshiba T. Functional expression of two Arabidopsis aldehyde oxidases in the yeast Pichia pastoris. J. Biochem. 127: 659-664 (2000).

Kolosova N, Gorenstein N, Kish CM, Dudareva N. Regulation of circadian methyl benzoate emission in diurnally and nocturnally emitting plants. Plant Cell 13: 2333-2347 (2001).

Kolosova N, Sherman D, Karlson D, Dudareva N. Cellular and subcellular localization of S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase, the enzyme responsible for biosynthesis of the volatile ester methylbenzoate in snapdragon flowers. Plant Physiol. 126: 956-964 (2001).

Kondo M, Oyama-Okubo N, Ando T, Marchesi E, Nakayama M. Floral scent diversity is differently expressed in emitted and endogenous components in Petunia axillaris lines. Ann. Bot. (Lond.) 98: 1253-1259 (2006).

Koo SP, Higgins CF, Booth IR. Regulation of compatible solute accumulation in Salmonella typhimurium: evidence for a glycine betaine efflux system. J. Gen. Microbiol. 137: 2617-2625 (1991).

Koo YJ, Kim MA, Kim EH, Song JT, Jung C, Moon JK, Kim JH, Seo HS, Song SI, Kim JK, Lee JS, Cheong JJ, Choi YD. Overexpression of salicylic acid carboxyl methyltransferase reduces salicylic acid-mediated pathogen resistance in Arabidopsis thaliana. Plant Mol. Biol. 64: 1-15 (2007).

Koorbanally C, Sewjee S, Mulholland DA, Crouch NR, Dold A. Homoisoflavanones from Pseudoprospero firmifolium of the monotypic tribe Pseudoprospereae (Hyacinthaceae: Hyacinthoideae). Phytochemistry 68: 2753-2756 (2007).

Kota P, Guo D, Zubieta C, Noel J, Dixon RA. O-Methylation of benzaldehyde derivatives by "lignin specific" caffeic acid 3-O-methyltransferase. Phytochemistry 65: 837-846 (2004).

Kovacik J, Klejdus B. Dynamics of phenolic acids and lignin accumulation in metal-treated Matricaria chamomilla roots. Plant Cell Rep. 27: 605-615 (2008).

Krens FA, Keizer LCP, Capel IEM. Transgenic caraway, Carum carvi L.: a model species for metabolic engineering. Plant Cell Rep. 17: 39-43 (1997).

Krishnaswamy S, Bryan JK. Characterization of ligand-induced states of maize homoserine dehydrogenase. Arch. Biochem. Biophys. 227: 210-224 (1983).

Kristensen C, Morant M, Olsen CE, Ekstrom CT, Galbraith DW, Moller BL, Bak S. Metabolic engineering of dhurrin in transgenic Arabidopsis plants with marginal inadvertent effects on the metabolome and transcriptome. Proc. Natl. Acad. Sci. U.S.A. 102: 1779-1784 (2005).

Kuate SP, Padua RM, Eisenbeiss WF, Kreis W. Purification and characterization of malonyl-coenzyme A: 21-hydroxypregnane 21-O-malonyltransferase (Dp21MaT) from leaves of Digitalis purpurea L. Phytochemistry 69: 619-626 (2008).

Kubec R, Kim S, Musah RA. The lachrymatory principle of Petiveria alliacea. Phytochemistry 63: 37-40 (2003).

Kulka RG. Hormonal control of root development on epiphyllous plantlets of Bryophyllum (Kalanchoe) marnierianum: role of auxin and ethylene. J. Exp. Bot. 59: 2361-2370 (2008).

Kulka RG. Cytokinins inhibit epiphyllous plantlet development on leaves of Bryophyllum (Kalanchoe) marnierianum. J. Exp. Bot. 57: 4089-4098 (2006).

Kwon M, Davin LB, Lewis NG. In situ hybridization and immunolocalization of lignan reductases in woody tissues: implications for heartwood formation and other forms of vascular tissue preservation. Phytochemistry 57: 899-914 (2001).

Lamplot Z, Sebela M, Malon M, Lenobel R, Lemr K, Havlis J, Pec P, Qiao C, Sayre LM. 1,5-Diamino-2-pentyne is both a substrate and inactivator of plant copper amine oxidases. Eur. J. Biochem. 271: 4696-4708 (2004).

Landmann C, Fink B, Schwab W. FaGT2: a multifunctional enzyme from strawberry (Fragaria x ananassa) fruits involved in the metabolism of natural and xenobiotic compounds. Planta 226: 417-428 (2007).

Lange BM, Ketchum RE, Croteau RB. Isoprenoid biosynthesis. Metabolite profiling of peppermint oil gland secretory cells and application to herbicide target analysis. Plant Physiol. 127: 305-314 (2001).

Lapadatescu C, Ginies C, Le Quere JL, Bonnarme P. Novel scheme for biosynthesis of aryl metabolites from L-phenylalanine in the fungus Bjerkandera adusta. Appl. Environ. Microbiol. 66: 1517-1522 (2000).

Lautala P, Ulmanen I, Taskinen J. Radiochemical high-performance liquid chromatographic assay for the determination of catechol O-methyltransferase activity towards various substrates. J. Chromatogr. B. Biomed. Sci. Appl. 736: 143-151 (1999).

Lawrence MC, Barbosa JA, Smith BJ, Hall NE, Pilling PA, Ooi HC, Marcuccio SM. Structure and mechanism of a sub-family of enzymes related to N-acetylneuraminate lyase. J. Mol. Biol. 266: 381-399 (1997).

Lebrun-Garcia A, Chiltz A, Gout E, Bligny R, Pugin A. Questioning the role of salicylic acid and cytosolic acidification in mitogen-activated protein kinase activation induced by cryptogein in tobacco cells. Planta 214: 792-797 (2002).

Lecain DR, Morgan JA, Mosier AR, Nelson JA. Soil and plant water relations determine photosynthetic responses of C3 and C4 grasses in a semi-arid ecosystem under elevated CO2. Ann. Bot. (Lond.) 92: 41-52 (2003).

Lee SY, Kim HU, Park JH, Park JM, Kim TY. Metabolic engineering of microorganisms: general strategies and drug production. Drug Discov. Today 14: 78-88 (2009).

Leon J, Shulaev V, Yalpani N, Lawton MA, Raskin I. Benzoic acid 2-hydroxylase, a soluble oxygenase from tobacco, catalyzes salicylic acid biosynthesis. Proc. Natl. Acad. Sci. U.S.A. 92: 10413-10417 (1995).

Leon J, Yalpani N, Rakin I, Lawton MA. Induction of benzoic acid-2-hydroxylase in virus-inoculated tobacco. Plant Physiol. 103: 323-328 (1993).

Lewis BD, Karlin-Neumann G, Davis RW, Spalding EP. Ca(2+)-activated anion channels and membrane depolarizations induced by blue light and cold in Arabidopsis seedlings. Plant Physiol. 114: 1327-1334 (1997).

Lexa M, Genkov T, Brzobohaty B. Inhibitory effects of elevated endogenous cytokinins on nitrate reductase in ipt-expressing tobacco are eliminated by short-term exposure to benzyladenine. Physiol. Plant. 115: 284-290 (2002).

Li D, Shen J, Wu T, Xu Y, Zong X, Li D, Shu H. Overexpression of the apple alcohol acyltransferase gene alters the profile of volatile blends in transgenic tobacco leaves. Physiol. Plant. 134: 394-402 (2008).

Li SM, Heide L. The biosynthetic gene clusters of aminocoumarin antibiotics. Planta Med. 72: 1093-1099 (2006).

Li T, Rosazza JP. NMR identification of an acyl-adenylate intermediate in the aryl-aldehyde oxidoreductase catalyzed reaction. J. Biol. Chem. 273: 34230-34233 (1998).

Liscombe DK, Facchini PJ. Evolutionary and cellular webs in benzylisoquinoline alkaloid biosynthesis. Curr. Opin. Biotechnol. 19: 173-180 (2008).

Liu B, Beuerle T, Klundt T, Beerhues L. Biphenyl synthase from yeast-extract-treated cell cultures of Sorbus aucuparia. Planta 218: 492-496 (2004).

Liu B, Falkenstein-Paul H, Schmidt W, Beerhues L. Benzophenone synthase and chalcone synthase from Hypericum androsaemum cell cultures: cDNA cloning, functional expression, and site-directed mutagenesis of two polyketide synthases. Plant J. 34: 847-855 (2003).

Liu B, Raeth T, Beuerle T, Beerhues L. Biphenyl synthase, a novel type III polyketide synthase. Planta 225: 1495-1503 (2007).

Liu CZ, Gao M, Guo B. Plant regeneration of Erigeron breviscapus (vant.) Hand. Mazz. and its chromatographic fingerprint analysis for quality control. Plant Cell Rep. 27: 39-45 (2008).

Liu F, Jensen CR, Andersen MN. Pod set related to photosynthetic rate and endogenous ABA in soybeans subjected to different water regimes and exogenous ABA and BA at early reproductive stages. Ann. Bot. (Lond.) 94: 405-411 (2004).

Liu HK, Yang C, Wei ZM. Efficient Agrobacterium tumefaciens-mediated transformation of soybeans using an embryonic tip regeneration system. Planta 219: 1042-1049 (2004).

Liu J, Benedict CR, Stipanovic RD, Bell AA. Purification and characterization of S-adenosyl-L-methionine:desoxyhemigossypol-6-O-methyltransferase from cotton plants. An enzyme capable of methylating the defense terpenoids of cotton. Plant Physiol. 121: 1017-1024 (1999).

Liu J, Feng Z, Xu J, Wang Y, Zhang P. Rare biscoumarins and a chlorogenic acid derivative from Erycibe obtusifolia. Phytochemistry 68: 1775-1780 (2007).

Liu P, Guo H, Tian Y, Wang Q, Guo D. Benzoic acid allopyranosides from the bark of Pseudolarix kaempferi. Phytochemistry 67: 1395-1398 (2006).

Loffelhardt W. Formation of benzoic acid and p-hydroxybenzoic acid in the blue green alga Anacystis nidulans: a thylakoid-bound enzyme complex analogous to the chloroplast system. Z. Naturforsch. [C] 31: 693-699 (1976).

Loffelhardt W, Kindl H. The conversion of L-phenylalanine into benzoic acid on the thylakoid membrane of higher plants. Hoppe Seylers Z. Physiol. Chem. 356: 487-493 (1975).

Lomascolo A, Asther M, Navarro D, Antona C, Delattre M, Lesage-Meessen L. Shifting the biotransformation pathways of L-phenylalanine into benzaldehyde by Trametes suaveolens CBS 334.85 using HP20 resin. Lett. Appl. Microbiol. 32: 262-267 (2001).

Lomascolo A, Lesage-Meessen L, Labat M, Navarro D, Delattre M, Asther M. Enhanced benzaldehyde formation by a monokaryotic strain of Pycnoporus cinnabarinus using a selective solid adsorbent in the culture medium. Can. J. Microbiol. 45: 653-657 (1999).

Long MC, Nagegowda DA, Kaminaga Y, Ho KK, Kish CM, Schnepp J, Sherman D, Weiner H, Rhodes D, Dudareva N. Involvement of snapdragon benzaldehyde dehydrogenase in benzoic acid biosynthesis. Plant J. 59: 256-265 (2009).

Lopes AA, Baldoqui DC, Lopez SN, Kato MJ, Bolzani Vda S, Furlan M. Biosynthetic origins of the isoprene units of gaudichaudianic acid in Piper gaudichaudianum (Piperaceae). Phytochemistry 68: 2053-2058 (2007).

Loscher R, Heide L. Biosynthesis of p-hydroxybenzoate from p-coumarate and p-coumaroyl-coenzyme A in cell-free extracts of Lithospermum erythrorhizon cell cultures. Plant Physiol. 106: 271-279 (1994).

Lu JL, Ertl JR, Chen CM. Cytokinin enhancement of the light induction of nitrate reductase transcript levels in etiolated barley leaves. Plant Mol. Biol. 14: 585-594 (1990).

Ludwig-Muller J, Vertocnik A, Town CD. Analysis of indole-3-butyric acid-induced adventitious root formation on Arabidopsis stem segments. J. Exp. Bot. 56: 2095-2105 (2005).

Luka Z, Pakhomova S, Loukachevitch LV, Egli M, Newcomer ME, Wagner C. 5-Methyltetrahydrofolate is bound in intersubunit areas of rat liver folate-binding protein glycine N-methyltransferase. J. Biol. Chem. 282: 4069-4075 (2007).

Luna CM, Casano LM, Trippi VS. Inhibition of wheat nitrate reductase activity by zinc. Biol. Plant. 43: 257-262 (2000).

Lunkenbein S, Bellido M, Aharoni A, Salentijn EM, Kaldenhoff R, Coiner HA, Munoz-Blanco J, Schwab W. Cinnamate metabolism in ripening fruit. Characterization of a UDP-glucose:cinnamate glucosyltransferase from strawberry. Plant Physiol. 140: 1047-1058 (2006).

Lykkesfeldt J, Moller BL. Synthesis of benzylglucosinolate in Tropaeolum majus L. Isothiocyanates as potent enzyme inhibitors. Plant Physiol. 102: 609-613 (1993).

Ma QH, Wang XM. Characterization of an ethylene receptor homologue from wheat and its expression during leaf senescence. J. Exp. Bot. 54: 1489-1490 (2003).

Martin AK. The origin of urinary aromatic compounds excreted by ruminants. 2. The metabolism of phenolic cinnamic acids to benzoic acid. Br. J. Nutr. 47: 155-164 (1982).

Martin F, Hay AE, Corno L, Gupta MP, Hostettmann K. Iridoid glycosides from the stems of Pithecoctenium crucigerum (Bignoniaceae). Phytochemistry 68: 1307-1311 (2007).

Maurizi MR, Ginsburg A. Active site ligand stabilization of quaternary structures of glutamine synthetase from Escherichia coli. J. Biol. Chem. 257: 7246-7251 (1982).

Maurya R, Singh R, Deepak M, Handa SS, Yadav PP, Mishra PK. Constituents of Pterocarpus marsupium: an ayurvedic crude drug. Phytochemistry 65: 915-920 (2004).

Mayer MJ, Narbad A, Parr AJ, Parker ML, Walton NJ, Mellon FA, Michael AJ. Rerouting the plant phenylpropanoid pathway by expression of a novel bacterial enoyl-CoA hydratase/lyase enzyme function. Plant Cell 13: 1669-1682 (2001).

McConkey GA. Targeting the shikimate pathway in the malaria parasite Plasmodium falciparum. Antimicrob. Agents Chemother. 43: 175-177 (1999).

McQualter RB, Chong BF, Meyer K, Van Dyk DE, O'Shea MG, Walton NJ, Viitanen PV, Brumbley SM. Initial evaluation of sugarcane as a production platform for p-hydroxybenzoic acid. Plant Biotechnol. J. 3: 29-41 (2005).

Medina RD, Faloci MM, Gonzalez AM, Mroginski LA. In vitro cultured primary roots derived from stem segments of cassava (Manihot esculenta) can behave like storage organs. Ann. Bot. (Lond.) 99: 409-423 (2007).

Mee B, Kelleher D, Frias J, Malone R, Tipton KF, Henehan GT, Windle HJ. Characterization of cinnamyl alcohol dehydrogenase of Helicobacter pylori. An aldehyde dismutating enzyme. FEBS J. 272: 1255-1264 (2005).

Meganathan R. Ubiquinone biosynthesis in microorganisms. FEMS Microbiol. Lett. 203: 131-139 (2001).

Merali Z, Mayer MJ, Parker ML, Michael AJ, Smith AC, Waldron KW. Metabolic diversion of the phenylpropanoid pathway causes cell wall and morphological changes in transgenic tobacco stems. Planta 225: 1165-1178 (2007).

Mester T, Swarts HJ, Romero i Sole S, de Bont JA, Field JA. Stimulation of aryl metabolite production in the basidiomycete Bjerkandera sp. strain BOS55 with biosynthetic precursors and lignin degradation products. Appl. Environ. Microbiol. 63: 1987-1994 (1997).

Mika A, Luthje S. Properties of guaiacol peroxidase activities isolated from corn root plasma membranes. Plant Physiol. 132: 1489-1498 (2003).

Mikkelsen MD, Petersen BL, Olsen CE, Halkier BA. Biosynthesis and metabolic engineering of glucosinolates. Amino Acids 22: 279-295 (2002).

Milkowski C, Baumert A, Strack D. Cloning and heterologous expression of a rape cDNA encoding UDP-glucose:sinapate glucosyltransferase. Planta 211: 883-886 (2000).

Miller MJ, Cleary DG, Ream JE, Snyder KR, Sikorski JA. New EPSP synthase inhibitors: synthesis and evaluation of an aromatic tetrahedral intermediate mimic containing a 3-malonate ether as a 3-phosphate surrogate. Bioorg. Med. Chem. 3: 1685-1692 (1995).

Miller MJ, Ream JE, Walker MC, Sikorski JA. Functionalized 3,5-dihydroxybenzoates as potent novel inhibitors of EPSP synthase. Bioorg. Med. Chem. 2: 331-338 (1994).

Minami H, Kim JS, Ikezawa N, Takemura T, Katayama T, Kumagai H, Sato F. Microbial production of plant benzylisoquinoline alkaloids. Proc. Natl. Acad. Sci. U.S.A. 105: 7393-7398 (2008).

Mitra A, Mayer MJ, Mellon FA, Michael AJ, Narbad A, Parr AJ, Waldron KW, Walton NJ. 4-Hydroxycinnamoyl-CoA hydratase/lyase, an enzyme of phenylpropanoid cleavage from Pseudomonas, causes formation of C(6)-C(1) acid and alcohol glucose conjugates when expressed in hairy roots of Datura stramonium L. Planta 215: 79-89 (2002).

Miyamoto K, Hoshino T, Yamashita M, Ueda J. Automorphosis of etiolated pea seedlings in space is simulated by a three-dimensional clinostat and the application of inhibitors of auxin polar transport. Physiol. Plant. 123: 467-474 (2005).

Miyazawa Y, Sakai A, Matsunaga S, Asami T, Kawano S, Kuroiwa T, Yoshida S. Isolation and expression of a novel starch-storing cell-specific gene containing the KH RNA binding domain from tobacco-cultured cells BY-2. J. Exp. Bot. 53: 2451-2452 (2002).

Miyazawa Y, Sakai A, Miyagishima Sy, Takano H, Kawano S, Kuroiwa T. Auxin and cytokinin have opposite effects on amyloplast development and the expression of starch synthesis genes in cultured bright yellow-2 tobacco cells. Plant Physiol. 121: 461-470 (1999).

Miziak P, Zon J, Amrhein N, Gancarz R. Inhibitors of phenylalanine ammonia-lyase: substituted derivatives of 2-aminoindane-2-phosphonic acid and 1-aminobenzylphosphonic acid. Phytochemistry 68: 407-415 (2007).

Mlejnek P, Dolezel P, Prochazka S. Intracellular phosphorylation of benzyladenosine is related to apoptosis induction in tobacco BY-2 cells. Plant Cell Environ. 26: 1723-1735 (2003).

Mlejnek P, Prochazka S. Activation of caspase-like proteases and induction of apoptosis by isopentenyladenosine in tobacco BY-2 cells. Planta 215: 158-166 (2002).

Mogi T, Yamamoto H, Nakao T, Yamato I, Anraku Y. Genetic and physical characterization of putP, the proline carrier gene of Escherichia coli K12. Mol. Gen. Genet. 202: 35-41 (1986).

Mok MC, Martin RC, Dobrev PI, Vankova R, Ho PS, Yonekura-Sakakibara K, Sakakibara H, Mok DW. Topolins and hydroxylated thidiazuron derivatives are substrates of cytokinin O-glucosyltransferase with position specificity related to receptor recognition. Plant Physiol. 137: 1057-1066 (2005).

Monroe DM, Noyes CM, Lundblad RL, Kingdon HS, Griffith MJ. Interaction of substrates with glutamine synthetase after limited proteolysis. Biochemistry 23: 4565-4572 (1984).

Montague MJ. Calcium antagonists inhibit sustained gibberellic acid-induced growth of Avena (oat) stem segments. Plant Physiol. 101: 399-405 (1993).

Montesano M, Hyytiainen H, Wettstein R, Palva ET. A novel potato defence-related alcohol:NADP+ oxidoreductase induced in response to Erwinia carotovora. Plant Mol. Biol. 52: 177-189 (2003).

Moons A. Ospdr9, which encodes a PDR-type ABC transporter, is induced by heavy metals, hypoxic stress and redox perturbations in rice roots. FEBS Lett. 553: 370-376 (2003).

Morgan WD, Birdsall B, Nieto PM, Gargaro AR, Feeney J. 1H/15N HSQC NMR studies of ligand carboxylate group interactions with arginine residues in complexes of brodimoprim analogues and Lactobacillus casei dihydrofolate reductase. Biochemistry 38: 2127-2134 (1999).

Morita H, Noguchi H, Schroder J, Abe I. Novel polyketides synthesized with a higher plant stilbene synthase. Eur. J. Biochem. 268: 3759-3766 (2001).

Morrant DS, Schumann R, Petit S. Field methods for sampling and storing nectar from flowers with low nectar volumes. Ann. Bot. (Lond.) 103: 533-542 (2009).

Morreel K, Ralph J, Kim H, Lu F, Goeminne G, Ralph S, Messens E, Boerjan W. Profiling of oligolignols reveals monolignol coupling conditions in lignifying poplar xylem. Plant Physiol. 136: 3537-3549 (2004).

Moses U, Churchich JE. Reactivity of one thiol group in the dimeric protein, 4-aminobutyrate aminotransferase. Biochim. Biophys. Acta 613: 392-400 (1980).

Mouillon JM, Ravanel S, Douce R, Rebeille F. Folate synthesis in higher-plant mitochondria: coupling between the dihydropterin pyrophosphokinase and the dihydropteroate synthase activities. Biochem. J. 363: 313-319 (2002).

Mourad G, Haughn G, King J. Intragenic recombination in the CSR1 locus of Arabidopsis. Mol. Gen. Genet. 243: 178-184 (1994).

Muhlenweg A, Melzer M, Li SM, Heide L. 4-Hydroxybenzoate 3-geranyltransferase from Lithospermum erythrorhizon: purification of a plant membrane-bound prenyltransferase. Planta 205: 407-413 (1998).

Murfitt LM, Kolosova N, Mann CJ, Dudareva N. Purification and characterization of S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase, the enzyme responsible for biosynthesis of the volatile ester methyl benzoate in flowers of Antirrhinum majus. Arch. Biochem. Biophys. 382: 145-151 (2000).

Mussig C, Shin GH, Altmann T. Brassinosteroids promote root growth in Arabidopsis. Plant Physiol. 133: 1261-1271 (2003).

Mustafa NR, Kim HK, Choi YH, Erkelens C, Lefeber AW, Spijksma G, van der Heijden R, Verpoorte R. Biosynthesis of salicylic acid in fungus elicited Catharanthus roseus cells. Phytochemistry 70: 532-539 (2009).

Mutanyatta J, Matapa BG, Shushu DD, Abegaz BM. Homoisoflavonoids and xanthones from the tubers of wild and in vitro regenerated Ledebouria graminifolia and cytotoxic activities of some of the homoisoflavonoids. Phytochemistry 62: 797-804 (2003).

Nacry P, Canivenc G, Muller B, Azmi A, Van Onckelen H, Rossignol M, Doumas P. A role for auxin redistribution in the responses of the root system architecture to phosphate starvation in Arabidopsis. Plant Physiol. 138: 2061-2074 (2005).

Nakayama T, Esaki N, Tanaka H, Soda K. Specific labeling of the essential cysteine residue of L-methionine gamma-lyase with a cofactor analogue, N-(bromoacetyl)pyridoxamine phosphate. Biochemistry 27: 1587-1591 (1988).

Nam KH, Dudareva N, Pichersky E. Characterization of benzylalcohol acetyltransferases in scented and non-scented Clarkia species. Plant Cell Physiol. 40: 916-923 (1999).

Nandi DL, Lucas SV, Webster LT Jr. Benzoyl-coenzyme A:glycine N-acyltransferase and phenylacetyl-coenzyme A:glycine N-acyltransferase from bovine liver mitochondria. Purification and characterization. J. Biol. Chem. 254: 7230-7237 (1979).

Negre F, Kish CM, Boatright J, Underwood B, Shibuya K, Wagner C, Clark DG, Dudareva N. Regulation of methylbenzoate emission after pollination in snapdragon and petunia flowers. Plant Cell 15: 2992-3006 (2003).

Negre F, Kolosova N, Knoll J, Kish CM, Dudareva N. Novel S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase, an enzyme responsible for biosynthesis of methyl salicylate and methyl benzoate, is not involved in floral scent production in snapdragon flowers. Arch. Biochem. Biophys. 406: 261-270 (2002).

Negrel J, Javelle F. Purification, characterization and partial amino acid sequencing of hydroxycinnamoyl-CoA:tyramine N-(hydroxycinnamoyl)transferase from tobacco cell-suspension cultures. Eur. J. Biochem. 247: 1127-1135 (1997).

Negrel J, Javelle F, Paynot M. Biochemical basis of resistance of tobacco callus tissue cultures to hydroxyphenylethylamines. Plant Physiol. 103: 329-334 (1993).

Ng K, Johnson E, Stone BA. Specificity of binding of beta-glucoside activators of ryegrass (1-->3)-beta-glucan synthase and the synthesis of some potential photoaffinity activators. Plant Physiol. 111: 1227-1231 (1996).

Ngameni B, Touaibia M, Patnam R, Belkaid A, Sonna P, Ngadjui BT, Annabi B, Roy R. Inhibition of MMP-2 secretion from brain tumor cells suggests chemopreventive properties of a furanocoumarin glycoside and of chalcones isolated from the twigs of Dorstenia turbinata. Phytochemistry 67: 2573-2579 (2006).

Nguyen AT, Fontaine J, Malonne H, Duez P. Homoisoflavanones from Disporopsis aspera. Phytochemistry 67: 2159-2163 (2006).

Nichols BP, Green JM. Cloning and sequencing of Escherichia coli ubiC and purification of chorismate lyase. J. Bacteriol. 174: 5309-5316 (1992).

Nichols BP, Seibold AM, Doktor SZ. Para-aminobenzoate synthesis from chorismate occurs in two steps. J. Biol. Chem. 264: 8597-8601 (1989).

Nierop Groot MN, De Bont JAM. Involvement of manganese in conversion of phenylalanine to benzaldehyde by lactic acid bacteria. Appl. Environ. Microbiol. 65: 5590-5593 (1999).

Nierop Groot MN, de Bont JAM. Conversion of phenylalanine to benzaldehyde initiated by an aminotransferase in Lactobacillus plantarum. Appl. Environ. Microbiol. 64: 3009-3013 (1998).

Nishimaki T, Yamanaka H, Mizugaki M. Acetyl-CoA-dependent chain elongation of fatty acids in Escherichia coli K-12. J. Biochem. (Tokyo) 99: 365-374 (1986).

Nishina Y, Sato K, Shiga K. Proton release from flavoprotein D-amino acid oxidase on complexation with the zwitterionic ligand, trigonelline. J. Biochem. (Tokyo) 107: 726-731 (1990).

Niu G, Liu G, Tian Y, Tan H. SanJ, an ATP-dependent picolinate-CoA ligase, catalyzes the conversion of picolinate to picolinate-CoA during nikkomycin biosynthesis in Streptomyces ansochromogenes. Metab. Eng. 8: 183-195 (2006).

Nogales J, Palsson BO, Thiele I. A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory. BMC Syst. Biol. 2: 79 (2008).

Noh B, Spalding EP. Anion channels and the stimulation of anthocyanin accumulation by blue light in Arabidopsis seedlings. Plant Physiol. 116: 503-509 (1998).

Noiriel A, Naponelli V, Gregory JF 3rd, Hanson AD. Pterin and folate salvage. Plants and Escherichia coli lack capacity to reduce oxidized pterins. Plant Physiol. 143: 1101-1109 (2007).

Nolan KE, Irwanto RR, Rose RJ. Auxin up-regulates MtSERK1 expression in both Medicago truncatula root-forming and embryogenic cultures. Plant Physiol. 133: 218-230 (2003).

Norman C, Howell KA, Millar AH, Whelan JM, Day DA. Salicylic acid is an uncoupler and inhibitor of mitochondrial electron transport. Plant Physiol. 134: 492-501 (2004).

Novikova GV, Moshkov IE, Smith AR, Kulaeva ON, Hall MA. The effect of ethylene and cytokinin on guanosine 5'-triphosphate binding and protein phosphorylation in leaves of Arabidopsis thaliana. Planta 208: 239-246 (1999).

Ogawa D, Nakajima N, Sano T, Tamaoki M, Aono M, Kubo A, Kanna M, Ioki M, Kamada H, Saji H. Salicylic acid accumulation under O3 exposure is regulated by ethylene in tobacco plants. Plant Cell Physiol. 46: 1062-1072 (2005).

Ohara K, Kokado Y, Yamamoto H, Sato F, Yazaki K. Engineering of ubiquinone biosynthesis using the yeast coq2 gene confers oxidative stress tolerance in transgenic tobacco. Plant J. 40: 734-743 (2004).

Okada K, Ohara K, Yazaki K, Nozaki K, Uchida N, Kawamukai M, Nojiri H, Yamane H. The AtPPT1 gene encoding 4-hydroxybenzoate polyprenyl diphosphate transferase in ubiquinone biosynthesis is required for embryo development in Arabidopsis thaliana. Plant Mol. Biol. 55: 567-577 (2004).

Olschlager C, Regos I, Zeller FJ, Treutter D. Identification of galloylated propelargonidins and procyanidins in buckwheat grain and quantification of rutin and flavanols from homostylous hybrids originating from F. esculentum x F. homotropicum. Phytochemistry 69: 1389-1397 (2008).

Olsen LF, Hauser MJ, Kummer U. Mechanism of protection of peroxidase activity by oscillatory dynamics. Eur. J. Biochem. 270: 2796-2804 (2003).

Omokawa H, Aonuma S. Amelioration of the salt-stressed root growth of rice and normalization of the Na+ distribution between the shoot and root by (S)-alpha-methylbenzyl-2-fluoro-4-methylphenylurea. Biosci. Biotechnol. Biochem. 66: 336-343 (2002).

Omura H, Honda K. Priority of color over scent during flower visitation by adult Vanessa indica butterflies. Oecologia 142: 588-596 (2005).

Orlova I, Marshall-Colon A, Schnepp J, Wood B, Varbanova M, Fridman E, Blakeslee JJ, Peer WA, Murphy AS, Rhodes D, Pichersky E, Dudareva N. Reduction of benzenoid synthesis in petunia flowers reveals multiple pathways to benzoic acid and enhancement in auxin transport. Plant Cell 18: 3458-3475 (2006).

Ormenese S, Bernier G, Perilleux C. Cytokinin application to the shoot apical meristem of Sinapis alba enhances secondary plasmodesmata formation. Planta 224: 1481-1484 (2006).

Orsomando G, Bozzo GG, de la Garza RD, Basset GJ, Quinlivan EP, Naponelli V, Rebeille F, Ravanel S, Gregory JF 3rd, Hanson AD. Evidence for folate-salvage reactions in plants. Plant J. 46: 426-435 (2006).

Orsomando G, de la Garza RD, Green BJ, Peng M, Rea PA, Ryan TJ, Gregory JF 3rd, Hanson AD. Plant gamma-glutamyl hydrolases and folate polyglutamates: characterization, compartmentation, and co-occurrence in vacuoles. J. Biol. Chem. 280: 28877-28884 (2005).

Oudot C, Jaquinod M, Cortay JC, Cozzone AJ, Jault JM. The isocitrate dehydrogenase kinase/phosphatase from Escherichia coli is highly sensitive to in-vitro oxidative conditions role of cysteine67 and cysteine108 in the formation of a disulfide-bonded homodimer. Eur. J. Biochem. 262: 224-249 (1999).

Oughlissi-Dehak K, Lawton P, Michalet S, Bayet C, Darbour N, Hadj-Mahammed M, Badjah-Hadj-Ahmed YA, Dijoux-Franca MG, Guilet D. Sesquiterpenes from aerial parts of Ferula vesceritensis. Phytochemistry 69: 1933-1938 (2008).

Ounaroon A, Decker G, Schmidt J, Lottspeich F, Kutchan TM. (R,S)-Reticuline 7-O-methyltransferase and (R,S)-norcoclaurine 6-O-methyltransferase of Papaver somniferum - cDNA cloning and characterization of methyl transfer enzymes of alkaloid biosynthesis in opium poppy. Plant J. 36: 808-819 (2003).

Oven M, Raith K, Neubert RH, Kutchan TM, Zenk MH. Homo-phytochelatins are synthesized in response to cadmium in azuki beans. Plant Physiol. 126: 1275-1280 (2001).

Paarup M, Friedrich MW, Tindall BJ, Finster K. Characterization of the psychrotolerant acetogen strain SyrA5 and the emended description of the species Acetobacterium carbinolicum. Antonie Van Leeuwenhoek 89: 55-69 (2006).

Padmaja S, Squadrito GL, Pryor WA. Inactivation of glutathione peroxidase by peroxynitrite. Arch. Biochem. Biophys. 349: 1-6 (1998).

Pal M, Horvath E, Janda T, Paldi E, Szalai G. Cadmium stimulates the accumulation of salicylic acid and its putative precursors in maize (Zea mays) plants. Physiol. Plant. 125: 356-364 (2005).

Palmer JM, Short TW, Gallagher S, Briggs WR. Blue light-induced phosphorylation of a plasma membrane-associated protein in Zea mays L. Plant Physiol. 102: 1211-1218 (1993).

Palmieri G, Di Palo M, Scaloni A, Orru S, Marino G, Sannia G. Glutamate-1-semialdehyde aminotransferase from Sulfolobus solfataricus. Biochem. J. 320: 541-545 (1996).

Pamula F, Wheldrake JF. Purification and properties of the NADP-dependent glutamate dehydrogenase from Dictyostelium discoideum. Mol. Cell Biochem. 105: 85-92 (1991).

Pan X, Welti R, Wang X. Simultaneous quantification of major phytohormones and related compounds in crude plant extracts by liquid chromatography-electrospray tandem mass spectrometry. Phytochemistry 69: 1773-1781 (2008).

Pantel I, Lindgren PE, Neubauer H, Gotz F. Identification and characterization of the Staphylococcus carnosus nitrate reductase operon. Mol. Gen. Genet. 259: 105-114 (1998).

Park SU, Johnson AG, Penzes-Yost C, Facchini PJ. Analysis of promoters from tyrosine/dihydroxyphenylalanine decarboxylase and berberine bridge enzyme genes involved in benzylisoquinoline alkaloid biosynthesis in opium poppy. Plant Mol. Biol. 40: 121-131 (1999).

Parr IB, Boehlein SK, Dribben AB, Schuster SM, Richards NG. Mapping the aspartic acid binding site of Escherichia coli asparagine synthetase B using substrate analogs. J. Med. Chem. 39: 2367-2378 (1996).

Parsons JF, Jensen PY, Pachikara AS, Howard AJ, Eisenstein E, Ladner JE. Structure of Escherichia coli aminodeoxychorismate synthase: Architectural conservation and diversity in chorismate-utilizing enzymes. Biochemistry 41: 2198-2208 (2002).

Pathak M, Singh B, Sharma A, Agrawal P, Pasha SB, Das HR, Das RH. Molecular cloning, expression, and cytokinin (6-benzylaminopurine) antagonist activity of peanut (Arachis hypogaea) lectin SL-I. Plant Mol. Biol. 62: 529-545 (2006).

Payne RJ, Bulloch EM, Abell AD, Abell C. Design and synthesis of aromatic inhibitors of anthranilate synthase. Org. Biomol. Chem. 3: 3629-3635 (2005).

Payne RJ, Toscano MD, Bulloch EM, Abell AD, Abell C. Design and synthesis of aromatic inhibitors of anthranilate synthase. Org. Biomol. Chem. 3: 2271-2281 (2005).

Pearce FG, Andrews TJ. The relationship between side reactions and slow inhibition of ribulose-bisphosphate carboxylase revealed by a loop 6 mutant of the tobacco enzyme. J. Biol. Chem. 278: 32526-32536 (2003).

Pedras MS, Yu Y. Structure and biological activity of maculansin A, a phytotoxin from the phytopathogenic fungus Leptosphaeria maculans. Phytochemistry 69: 2966-2971 (2008).

Peters F, Rother M, Boll M. Selenocysteine-containing proteins in anaerobic benzoate metabolism of Desulfococcus multivorans. J. Bacteriol. 186: 2156-2163 (2004).

Petersen BL, Andreasson E, Bak S, Agerbirk N, Halkier BA. Characterization of transgenic Arabidopsis thaliana with metabolically engineered high levels of p-hydroxybenzylglucosinolate. Planta 212: 612-618 (2001).

Petersen BL, Chen S, Hansen CH, Olsen CE, Halkier BA. Composition and content of glucosinolates in developing Arabidopsis thaliana. Planta 214: 562-571 (2002).

Pflugmacher S, Schroder P, Sandermann H. Taxonomic distribution of plant glutathione S-transferases acting on xenobiotics. Phytochemistry 54: 267-273 (2000).

Phang JM, Downing SJ, Valle DL, Kowaloff EM. A radioisotopic assay for proline oxidase activity. J. Lab. Clin. Med. 85: 312-317 (1975).

Piacente S, Carbone V, Plaza A, Zampelli A, Pizza C. Investigation of the tuber constituents of maca (Lepidium meyenii Walp.). J. Agric. Food Chem. 50: 5621-5625 (2002).

Pichersky E, Raguso RA, Lewinsohn E, Croteau R. Floral scent production in Clarkia (Onagraceae) (I. Localization and developmental modulation of monoterpene emission and linalool synthase activity). Plant Physiol. 106: 1533-1540 (1994).

Picone JM, Clery RA, Watanabe N, MacTavish HS, Turnbull CG. Rhythmic emission of floral volatiles from Rosa damascena semperflorens cv. 'Quatre Saisons'. Planta 219: 468-478 (2004).

Picone JM, MacTavish HS, Clery RA. Emission of floral volatiles from Mahonia japonica (Berberidaceae). Phytochemistry 60: 611-617 (2002).

Pietrangeli P, Nocera S, Mondovi B, Morpurgo L. Is the catalytic mechanism of bacteria, plant, and mammal copper-TPQ amine oxidases identical? Biochim. Biophys. Acta. 1647: 152-156 (2003).

Pinkofsky HB, Ginsburg A, Reardon I, Heinrikson RL. Lysyl residue 47 is near the subunit ATP-binding site of glutamine synthetase from Escherichia coli. J. Biol. Chem. 259: 9616-9622 (1984).

Plieth C, Trewavas AJ. Reorientation of seedlings in the earth's gravitational field induces cytosolic calcium transients. Plant Physiol. 129: 786-796 (2002).

Podstolski A, Havkin-Frenkel D, Malinowski J, Blount JW, Kourteva G, Dixon RA. Unusual 4-hydroxybenzaldehyde synthase activity from tissue cultures of the vanilla orchid Vanilla planifolia. Phytochemistry 61: 611-620 (2002).

Poinas A, Gaillard J, Vignais P, Doussiere J. Exploration of the diaphorase activity of neutrophil NADPH oxidase. Eur. J. Biochem. 269: 1243-1252 (2002).

Polovnikova ES, McLeish MJ, Sergienko EA, Burgner JT, Anderson NL, Bera AK, Jordan F, Kenyon GL, Hasson MS. Structural and kinetic analysis of catalysis by a thiamin diphosphate-dependent enzyme, benzoylformate decarboxylase. Biochemistry 42: 1820-1830 (2003).

Popova AV, Velitchkova MY. Effect of membrane lipid order on the degree of freezing damage of thylakoid membranes. Cryo Letters. 25: 255-264 (2004).

Pott MB, Hippauf F, Saschenbrecker S, Chen F, Ross J, Kiefer I, Slusarenko A, Noel JP, Pichersky E, Effmert U, Piechulla B. Biochemical and structural characterization of benzenoid carboxyl methyltransferases involved in floral scent production in Stephanotis floribunda and Nicotiana suaveolens. Plant Physiol. 135: 1946-1955 (2004).

Prabhu V, Lui H, King J. Arabidopsis dihydropteroate synthase: general properties and inhibition by reaction product and sulfonamides. Phytochemistry 45: 23-27 (1997).

Pullen CB, Schmitz P, Hoffmann D, Meurer K, Boettcher T, von Bamberg D, Pereira AM, de Castro Franca S, Hauser M, Geertsema H, van Wyk A, Mahmud T, Floss HG, Leistner E. Occurrence and non-detectability of maytansinoids in individual plants of the genera Maytenus and Putterlickia. Phytochemistry 62: 377-387 (2003).

Qi Y, Kawano N, Yamauchi Y, Ling J, Li D, Tanaka K. Identification and cloning of a submergence-induced gene OsGGT (glycogenin glucosyltransferase) from rice (Oryza sativa L.) by suppression subtractive hybridization. Planta 221: 437-445 (2005).

Qi Y, Yamauchi Y, Ling J, Kawano N, Li D, Tanaka K. Cloning of a putative monogalactosyldiacylglycerol synthase gene from rice (Oryza sativa L.) plants and its expression in response to submergence and other stresses. Planta 219: 450-458 (2004).

Qu J, Xie C, Guo H, Yu W, Lou H. Antifungal dibenzofuran bis(bibenzyl)s from the liverwort Asterella angusta. Phytochemistry 68: 1767-1774 (2007).

Quang DN, Hashimoto T, Hitaka Y, Tanaka M, Nukada M, Yamamoto I, Asakawa Y. Thelephantins I-N; p-terphenyl derivatives from the inedible mushroom Hydnellum caeruleum. Phytochemistry 65: 1179-1184 (2004).

Quinlivan EP, Roje S, Basset G, Shachar-Hill Y, Gregory JF 3rd, Hanson AD. The folate precursor p-aminobenzoate is reversibly converted to its glucose ester in the plant cytosol. J. Biol. Chem. 278: 20731-20737 (2003).

Rahman A, Bannigan A, Sulaman W, Pechter P, Blancaflor EB, Baskin TI. Auxin, actin and growth of the Arabidopsis thaliana primary root. Plant J. 50: 514-528 (2007).

Ramadan T, Flowers TJ. Effects of salinity and benzyl adenine on development and function of microhairs of Zea mays L. Planta 219: 639-648 (2004).

Rashotte AM, Brady SR, Reed RC, Ante SJ, Muday GK. Basipetal auxin transport is required for gravitropism in roots of Arabidopsis. Plant Physiol. 122: 481-490 (2000).

Raskin I, Ehmann A, Melander WR, Meeuse BJ. Salicylic acid: a natural inducer of heat production in Arum lilies. Science 237: 1601-1602 (1987).

Raskin I, Turner IM, Melander WR. Regulation of heat production in the inflorescences of an Arum lily by endogenous salicylic acid. Proc. Natl. Acad. Sci. U.S.A. 86: 2214-2218 (1989).

Rassadina V, Domanskii V, Averina NG, Schoch S, Rudiger W. Correlation between chlorophyllide esterification, Shibata shift and regeneration of protochlorophyllide650 in flash-irradiated etiolated barley leaves. Physiol. Plant. 121: 556-567 (2004).

Rasulov AS, Evstigneeva ZG, Kretovich VL. Presence of SH-groups and histidine in the active site of Chlorella glutamine synthetase. Biokhimiia 43: 1090-1096 (1978).

Rathinasabapathi B, Fouad WM, Sigua CA. beta-Alanine betaine synthesis in the Plumbaginaceae. Purification and characterization of a trifunctional, S-adenosyl-L-methionine-dependent N-methyltransferase from Limonium latifolium leaves. Plant Physiol. 126: 1241-1249 (2001).

Rauh D, Graentzdoerffer A, Granderath K, Andreesen JR, Pich A. Tungsten-containing aldehyde oxidoreductase of Eubacterium acidaminophilum: isolation, characterization and molecular analysis. Eur. J. Biochem. 271: 212-219 (2004).

Reichelt M, Brown PD, Schneider B, Oldham NJ, Stauber E, Tokuhisa J, Kliebenstein DJ, Mitchell-Olds T, Gershenzon J. Benzoic acid glucosinolate esters and other glucosinolates from Arabidopsis thaliana. Phytochemistry 59: 663-671 (2002).

Reinhard K, Matern U. The biosynthesis of phytoalexins in Dianthus caryophyllus L. cell cultures: induction of benzoyl-CoA:anthranilate N-benzoyltransferase activity. Arch. Biochem. Biophys. 275: 295-301 (1989).

Riaz N, Malik A, Rehman AU, Ahmed Z, Muhammad P, Nawaz SA, Siddiqui J, Choudhary MI. Lipoxygenase inhibiting and antioxidant oligostilbene and monoterpene galactoside from Paeonia emodi. Phytochemistry 65: 1129-1135 (2004).

Ribeiro AS, Souza MO, Scofano HM, Creczynski-Pasa TB, Mignaco JA. Inhibition of spinach chloroplast F0F1 by an Fe2+/ascorbate/H2O2 system. Plant Physiol. Biochem. 45: 750-756 (2007).

Ribnicky DM, Shulaev V, Raskin I. Intermediates of salicylic acid biosynthesis in tobacco. Plant Physiol. 118: 565-572 (1998).

Rivero-Cruz B, Rivero-Cruz I, Rodriguez-Sotres R, Mata R. Effect of natural and synthetic benzyl benzoates on calmodulin. Phytochemistry 68: 1147-1155 (2007).

Rocha S, Coutinho P, Barros A, Coimbra MA, Delgadillo I, Dias Cardoso A. Aroma potential of two bairrada white grape varieties: Maria Gomes and Bical. J. Agric. Food Chem. 48: 4802-4807 (2000).

Rodrigo MJ, Lopez-Diaz I, Garcia-Martinez JL. The characterization of gio, a new pea mutant, shows the role of indoleacetic acid in the control of fruit development by the apical shoot. Plant J. 14: 83-90 (1998).

Roeder S, Dreschler K, Wirtz M, Cristescu SM, van Harren FJ, Hell R, Piechulla B. SAM levels, gene expression of SAM synthetase, methionine synthase and ACC oxidase, and ethylene emission from N. suaveolens flowers. Plant Mol. Biol. 70: 535-546 (2009).

Roeder S, Hartmann AM, Effmert U, Piechulla B. Regulation of simultaneous synthesis of floral scent terpenoids by the 1,8-cineole synthase of Nicotiana suaveolens. Plant Mol. Biol. 65: 107-124 (2007).

Rohde B, Hans J, Martens S, Baumert A, Hunziker P, Matern U. Anthranilate N-methyltransferase, a branch-point enzyme of acridone biosynthesis. Plant J. 53: 541-553 (2008).

Rohloff J. Volatiles from rhizomes of Rhodiola rosea L. Phytochemistry 59: 655-661 (2002).

Rohrbeck D, Buss D, Effmert U, Piechulla B. Localization of methyl benzoate synthesis and emission in Stephanotis floribunda and Nicotiana suaveolens flowers. Plant Biol. (Stuttg.) 8: 615-626 (2006).

Romagni JG, Duke SO, Dayan FE. Inhibition of plant asparagine synthetase by monoterpene cineoles. Plant Physiol. 123: 725-732 (2000).

Rooseboom M, Vermeulen NP, van Hemert N, Commandeur JN. Bioactivation of chemopreventive selenocysteine Se-conjugates and related amino acids by amino acid oxidases novel route of metabolism of selenoamino acids. Chem. Res. Toxicol. 14: 996-1005 (2001).

Rosowsky A, Forsch RA, Null A, Moran RG. 5-Deazafolate analogues with a rotationally restricted glutamate or ornithine side chain: synthesis and binding interaction with folylpolyglutamate synthetase. J. Med. Chem. 42: 3510-3519 (1999).

Rosowsky A, Forsch RA, Queener SF. Inhibition of Pneumocystis carinii, Toxoplasma gondii, and Mycobacterium avium dihydrofolate reductases by 2,4-diamino-5-[2-methoxy-5-(omega-carboxyalkyloxy)benzyl]pyrimidines. J. Med. Chem. 45: 233-241 (2002).

Ross EJ, Stone JM, Elowsky CG, Arredondo-Peter R, Klucas RV, Sarath G. Activation of the Oryza sativa non-symbiotic haemoglobin-2 promoter by the cytokinin-regulated transcription factor, ARR1. J. Exp. Bot. 55: 1721-1731 (2004).

Rosselli LK, Oliveira CL, Azzoni AR, Tada SF, Catani CF, Saraiva AM, Soares JS, Medrano FJ, Torriani IL, Souza AP. A new member of the aldo-keto reductase family from the plant pathogen Xylella fastidiosa. Arch. Biochem. Biophys. 453: 143-150 (2006).

Ryzlak MT, Pietruszko R. Human brain "high Km" aldehyde dehydrogenase: purification, characterization, and identification as NAD+ -dependent succinic semialdehyde dehydrogenase. Arch. Biochem. Biophys. 266: 386-396 (1988).

Sabaty M, Avazeri C, Pignol D, Vermeglio A. Characterization of the reduction of selenate and tellurite by nitrate reductases. Appl. Environ. Microbiol. 67: 5122-5126 (2001).

Sahr T, Ravanel S, Basset G, Nichols BP, Hanson AD, Rebeille F. Folate synthesis in plants: purification, kinetic properties, and inhibition of aminodeoxychorismate synthase. Biochem. J. 396: 157-162 (2006).

Saidi Y, Finka A, Chakhporanian M, Zryd JP, Schaefer DG, Goloubinoff P. Controlled expression of recombinant proteins in Physcomitrella patens by a conditional heat-shock promoter: a tool for plant research and biotechnology. Plant Mol. Biol. 59: 697-711 (2005).

Sakai K, Shitan N, Sato F, Ueda K, Yazaki K. Characterization of berberine transport into Coptis japonica cells and the involvement of ABC protein. J. Exp. Bot. 53: 1879-1886 (2002).

Samanani N, Alcantara J, Bourgault R, Zulak KG, Facchini PJ. The role of phloem sieve elements and laticifers in the biosynthesis and accumulation of alkaloids in opium poppy. Plant J. 47: 547-563 (2006).

Samanani N, Facchini PJ. Isolation and partial characterization of norcoclaurine synthase, the first committed step in benzylisoquinoline alkaloid biosynthesis, from opium poppy. Planta 213: 898-906 (2001).

Samanani N, Liscombe DK, Facchini PJ. Molecular cloning and characterization of norcoclaurine synthase, an enzyme catalyzing the first committed step in benzylisoquinoline alkaloid biosynthesis. Plant J. 40: 302-313 (2004).

Samanani N, Park SU, Facchini PJ. Cell type-specific localization of transcripts encoding nine consecutive enzymes involved in protoberberine alkaloid biosynthesis. Plant Cell 17: 915-926 (2005).

Samappito S, Page J, Schmidt J, De-Eknamkul W, Kutchan TM. Molecular characterization of root-specific chalcone synthases from Cassia alata. Planta 216: 64-71 (2002).

Samappito S, Page JE, Schmidt J, De-Eknamkul W, Kutchan TM. Aromatic and pyrone polyketides synthesized by a stilbene synthase from Rheum tataricum. Phytochemistry 62: 313-323 (2003).

Samuilov VD, Fedorenko TA. Lag phase of CO2-dependent O2 evolution by illuminated Anabaena variabilis cells. Biochemistry (Mosc.) 64: 610-619 (1999).

Sanchez Mde L, Gurusinghe SH, Bradford KJ, Vazquez-Ramos JM. Differential response of PCNA and Cdk-A proteins and associated kinase activities to benzyladenine and abscisic acid during maize seed germination. J. Exp. Bot. 56: 515-523 (2005).

Sarkissian CN, Scriver CR, Mamer OA. Quantitation of phenylalanine and its trans-cinnamic, benzoic and hippuric acid metabolites in biological fluids in a single GC-MS analysis. J. Mass Spectrom. 42: 811-817 (2007).

Satdive RK, Fulzele DP, Eapen S. Studies on production of ajmalicine in shake flasks by multiple shoot cultures of Catharanthus roseus. Biotechnol. Prog. 19: 1071-1075 (2003).

Sato F, Hashimoto T, Hachiya A, Tamura K, Choi KB, Morishige T, Fujimoto H, Yamada Y. Metabolic engineering of plant alkaloid biosynthesis. Proc. Natl. Acad. Sci. U.S.A. 98: 367-372 (2001).

Satya Narayan V, Nair PM. Potato tuber succinate semialdehyde dehydrogenase: purification and characterization. Arch. Biochem. Biophys. 275: 469-477 (1989).

Sawada MT, Ishimoto M. Proton translocation coupled to nitrite reduction in anaerobically grown Escherichia coli. J. Biochem. (Tokyo) 97: 205-211 (1985).

Scaglia F, Carter S, O'Brien WE, Lee B. Effect of alternative pathway therapy on branched chain amino acid metabolism in urea cycle disorder patients. Mol. Genet. Metab. 81: S79-S85 (2004).

Schade F, Legge RL, Thompson JE. Fragrance volatiles of developing and senescing carnation flowers. Phytochemistry 56: 703-710 (2001).

Schaller M, Schaffhauser M, Sans N, Wermuth B. Cloning and expression of succinic semialdehyde reductase from human brain. Identity with aflatoxin B1 aldehyde reductase. Eur. J. Biochem. 265: 1056-1060 (1999).

Schaneberg BT, Crockett S, Bedir E, Khan IA. The role of chemical fingerprinting: application to Ephedra. Phytochemistry 62: 911-918 (2003).

Schmidt J, Boettcher C, Kuhnt C, Kutchan TM, Zenk MH. Poppy alkaloid profiling by electrospray tandem mass spectrometry and electrospray FT-ICR mass spectrometry after [ring-(13)C(6)]-tyramine feeding. Phytochemistry 68: 189-202 (2007).

Schneider S, Mohamed ME, Fuchs G. Anaerobic metabolism of L-phenylalanine via benzoyl-CoA in the denitrifying bacterium Thauera aromatica. Arch. Microbiol. 168: 310-320 (1997).

Schoch GA, Attias R, Belghazi M, Dansette PM, Werck-Reichhart D. Engineering of a water-soluble plant cytochrome P450, CYP73A1, and NMR-based orientation of natural and alternate substrates in the active site. Plant Physiol. 133: 1198-1208 (2003).

Schoch GA, Nikov GN, Alworth WL, Werck-Reichhart D. Chemical inactivation of the cinnamate 4-hydroxylase allows for the accumulation of salicylic acid in elicited cells. Plant Physiol. 130: 1022-1031 (2002).

Schreiber L. Co-permeability of H-3-labelled water and C-14-labelled organic acids across isolated Prunus laurocerasus cuticles: effect of temperature on cuticular paths of diffusion. Plant Cell Environ. 25: 1087-1094 (2002).

Schutz A, Golbik R, Tittmann K, Svergun DI, Koch MH, Hubner G, Konig S. Studies on structure-function relationships of indolepyruvate decarboxylase from Enterobacter cloacae, a key enzyme of the indole acetic acid pathway. Eur. J. Biochem. 270: 2322-2331 (2003).

Seguin J, Muzac I, Ibrahim RK. Purification and immunological characterization of a recombinant trimethylflavonol 3'-O-methyltransferase. Phytochemistry 49: 319-325 (1998).

Sendker J, Nahrstedt A. Generation of primary amide glucosides from cyanogenic glucosides. Phytochemistry 70: 388-393 (2009).

Sgherri C, Stevanovic B, Navari-Izzo F. Role of phenolics in the antioxidative status of the resurrection plant Ramonda serbica during dehydration and rehydration. Physiol. Plant. 122: 478-485 (2004).

Shah A, Font JL, Miller MJ, Ream JE, Walker MC, Sikorski JA. New aromatic inhibitors of EPSP synthase incorporating hydroxymalonates as novel 3-phosphate replacements. Bioorg. Med. Chem. 5: 323-334 (1997).

Shalit M, Katzir N, Tadmor Y, Larkov O, Burger Y, Shalekhet F, Lastochkin E, Ravid U, Amar O, Edelstein M, Karchi Z, Lewinsohn E. Acetyl-Coa: alcohol acetyltransferase activity and aroma formation in ripening melon fruits. J. Agric. Food Chem. 49: 794-799 (2001).

Shaw JP, Schwager F, Harayama S. Substrate-specificity of benzyl alcohol dehydrogenase and benzaldehyde dehydrogenase encoded by TOL plasmid pWW0. Metabolic and mechanistic implications. Biochem. J. 283: 789-794 (1992).

Shearer G, Jones JR, Kohl DH. The consequences of the isotope effect on proline dehydrogenation rates estimated by the tritium loss method. Anal. Biochem. 203: 191-200 (1992).

Sheridan R, Jackson GA, LR, Ward J, Dunnill P. Rational engineering of the TOL meta-cleavage pathway. Biotechnol. Bioeng. 58: 240-249 (1998).

Shimizu M, Suzuki K, Miyazawa Y, Fujii N, Takahashi H. Differential accumulation of the mRNA of the auxin-repressed gene CsGRP1 and the auxin-induced peg formation during gravimorphogenesis of cucumber seedlings. Planta 225: 13-22 (2006).

Shin HC, Shim HO, Ahn SC, Cho JH, Chung MK, Han SS, Roh JK. Pharmacokinetic analysis for assessing developmental toxicity of a new synthetic acetolactate synthase inhibitor, LGC-40863, in rats. J. Pharmacol. Exp. Ther. 285: 795-799 (1998).

Shin HJ, Chong CK, Chang SI, Choi JD. Structural and functional role of cysteinyl residues in tobacco acetolactate synthase. Biochem. Biophys. Res. Commun. 271: 801-806 (2000).

Shin HJ, Kim TS, Lee HS, Park JY, Choi IK, Kwon HJ. Streptopyrrolidine, an angiogenesis inhibitor from a marine-derived Streptomyces sp. KORDI-3973. Phytochemistry 69: 2363-2366 (2008).

Shin JS, Kim BG. Kinetic modeling of omega-transamination for enzymatic kinetic resolution of alpha-methylbenzylamine. Biotechnol. Bioeng. 60: 534-540 (1998).

Shiono T, Kador PF, Kinoshita JJ. Purification and characterization of rat lens pyrroline-5-carboxylate reductase. Biochim. Biophys. Acta 881: 72-78 (1986).

Shiu CT, Lee TM. Ultraviolet-B-induced oxidative stress and responses of the ascorbate-glutathione cycle in a marine macroalga Ulva fasciata. J. Exp. Bot. 56: 2851-2865 (2005).

Shoeb M, Macmanus SM, Kumarasamy Y, Jaspars M, Nahar L, Thoo-Lin PK, Nazemiyeh H, Sarker SD. Americanin, a bioactive dibenzylbutyrolactone lignan, from the seeds of Centaurea americana. Phytochemistry 67: 2370-2375 (2006).

Shoji T, Winz R, Iwase T, Nakajima K, Yamada Y, Hashimoto T. Expression patterns of two tobacco isoflavone reductase-like genes and their possible roles in secondary metabolism in tobacco. Plant Mol. Biol. 50: 427-440 (2002).

Short TW, Reymond P, Briggs WR. A pea plasma membrane protein exhibiting blue light-induced phosphorylation retains photosensitivity following triton solubilization. Plant Physiol. 101: 647-655 (1993).

Shulaev V, Leon J, Raskin I. Is salicylic acid a translocated signal of systemic acquired resistance in tobacco? Plant Cell 7: 1691-1701 (1995).

Siebert M, Severin K, Heide L. Formation of 4-hydroxybenzoate in Escherichia coli: characterization of the ubiC gene and its encoded enzyme chorismate pyruvate-lyase. Microbiology 140: 897-904 (1994).

Siebert M, Sommer S, Li SM, Wang ZX, Severin K, Heide L. Genetic engineering of plant secondary metabolism. Accumulation of 4-hydroxybenzoate glucosides as a result of the expression of the bacterial ubiC gene in tobacco. Plant Physiol. 112: 811-819 (1996).

Sieburth LE. Auxin is required for leaf vein pattern in Arabidopsis. Plant Physiol. 121: 1179-1190 (1999).

Sim GE, Goh CJ, Loh CS. Induction of in vitro flowering in Dendrobium Madame Thong-In (Orchidaceae) seedlings is associated with increase in endogenous N(6)-(Delta (2)-isopentenyl)-adenine (iP) and N (6)-(Delta (2)-isopentenyl)-adenosine (iPA) levels. Plant Cell Rep. 27: 1281-1289 (2008).

Simon J, Gross R, Einsle O, Kroneck PM, Kroger A, Klimmek O. A NapC/NirT-type cytochrome c (NrfH) is the mediator between the quinone pool and the cytochrome c nitrite reductase of Wolinella succinogenes. Mol. Microbiol. 35: 686-696 (2000).

Simpson SD, Nakashima K, Narusaka Y, Seki M, Shinozaki K, Yamaguchi-Shinozaki K. Two different novel cis-acting elements of erd1, a clpA homologous Arabidopsis gene function in induction by dehydration stress and dark-induced senescence. Plant J. 33: 259-270 (2003).

Sippola K, Aro EM. Thiol redox state regulates expression of psbA genes in Synechococcus sp. PCC 7942. Plant Mol. Biol. 41: 425-433 (1999).

Sircar D, Mitra A. Accumulation of p-hydroxybenzoic acid in hairy roots of Daucus carota 2: confirming biosynthetic steps through feeding of inhibitors and precursors. J. Plant Physiol. 166: 1370-1380 (2009).

Sircar D, Mitra A. Evidence for p-hydroxybenzoate formation involving enzymatic phenylpropanoid side-chain cleavage in hairy roots of Daucus carota. J. Plant Physiol. 165: 407-414 (2008).

Smets R, Le J, Prinsen E, Verbelen JP, Van Onckelen HA. Cytokinin-induced hypocotyl elongation in light-grown Arabidopsis plants with inhibited ethylene action or indole-3-acetic acid transport. Planta 221: 39-47 (2005).

Smith-Becker J, Marois E, Huguet EJ, Midland SL, Sims JJ, Keen NT. Accumulation of salicylic acid and 4-hydroxybenzoic acid in phloem fluids of cucumber during systemic acquired resistance is preceded by a transient increase in phenylalanine ammonia-lyase activity in petioles and stems. Plant Physiol. 116: 231-238 (1998).

Sok DE. Ascorbate-induced oxidative inactivation of Zn2+-glycerophosphocholine cholinephosphodiesterase. J. Neurochem. 70: 1167-1174 (1998).

Sommer S, Heide L. Expression of bacterial chorismate pyruvate-lyase in tobacco: evidence for the presence of chorismate in the plant cytosol. Plant Cell Physiol. 39: 1240-1244 (1998).

Sommer S, Kohle A, Yazaki K, Shimomura K, Bechthold A, Heide L. Genetic engineering of shikonin biosynthesis hairy root cultures of Lithospermum erythrorhizon transformed with the bacterial ubiC gene. Plant Mol. Biol. 39: 683-693 (1999).

Speicher A, Heisel R, Kolz J. First detection of a chloroperoxidase in bryophytes. Phytochemistry 62: 679-682 (2003).

Speth AR, Hund HK, Lingens F. Terminal phenylalanine and tyrosine biosynthesis of Microtetraspora glauca. Biol. Chem. Hoppe Seyler 370: 591-599 (1989).

Spiteller P, Steglich W. Biosynthesis of 2-aminobenzaldehyde in flowers of Robinia pseudoacacia and Philadelphus coronarius. Phytochemistry 57: 361-363 (2001).

Spitzer B, Zvi MM, Ovadis M, Marhevka E, Barkai O, Edelbaum O, Marton I, Masci T, Alon M, Morin S, Rogachev I, Aharoni A, Vainstein A. Reverse genetics of floral scent: application of tobacco rattle virus-based gene silencing in Petunia. Plant Physiol. 145: 1241-1250 (2007).

Srinivasan V, Ciddi V, Bringi V, Shuler ML. Metabolic inhibitors, elicitors, and precursors as tools for probing yield limitation in taxane production by Taxus chinensis cell cultures. Biotechnol. Prog. 12: 457-465 (1996).

St-Pierre B, Laflamme P, Alarco AM, De Luca V. The terminal O-acetyltransferase involved in vindoline biosynthesis defines a new class of proteins responsible for coenzyme A-dependent acyl transfer. Plant J. 14: 703-713 (1998).

Stadthagen G, Kordulakova J, Griffin R, Constant P, Bottova I, Barilone N, Gicquel B, Daffe M, Jackson M. p-Hydroxybenzoic acid synthesis in Mycobacterium tuberculosis. J. Biol. Chem. 280: 40699-40706 (2005).

Staswick PE. The tryptophan conjugates of jasmonic and indole-3-acetic acids are endogenous auxin inhibitors. Plant Physiol. 150: 1310-1321 (2009).

Steenhoudt O, Keijers V, Okon Y, Vanderleyden J. Identification and characterization of a periplasmic nitrate reductase in Azospirillum brasilense Sp245. Arch. Microbiol. 175: 344-352 (2001).

Stephens CM, Bauerle R. Essential cysteines in 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Escherichia coli. Analysis by chemical modification and site-directed mutagenesis of the phenylalanine-sensitive isozyme. J. Biol. Chem. 267: 5762-5767 (1992).

Stevenson PC, Veitch NC, Simmonds MS. Polyoxygenated cyclohexane derivatives and other constituents from Kaempferia rotunda L. Phytochemistry 68: 1579-1586 (2007).

Stewart CR, Voetberg G, Rayapati PJ. The effects of benzyladenine, cycloheximide, and cirdycepin on wilting-induced abscisic acid and proline accumulations and abscisic acid- and salt-induced proline accumulation in barley leaves. Plant Physiol. 82: 703-707 (1986).

Stewart JJ, Akiyama T, Chapple C, Ralph J, Mansfield SD. The effects on lignin structure of overexpression of ferulate 5-hydroxylase in hybrid poplar. Plant Physiol. 150: 621-635 (2009).

Stoynova-Bakalova E, Petrov P. Control by cytokinins of the cellular behavior in the plate meristem of zucchini cotyledons. Planta 223: 1256-1262 (2006).

Stringer LD, El-Sayed AM, Cole LM, Manning LA, Suckling DM. Floral attractants for the female soybean looper, Thysanoplusia orichalcea (Lepidoptera: Noctuidae). Pest Manag. Sci. 64: 1218-1221 (2008).

Sudan C, Prakash S, Bhomkar P, Jain S, Bhalla-Sarin N. Ubiquitous presence of beta-glucuronidase (GUS) in plants and its regulation in some model plants. Planta 224: 853-864 (2006).

Sudhakar N, Nagendra-Prasad D, Mohan N, Murugesan K. Induction of systemic resistance in Lycopersicon esculentum cv. PKM1 (tomato) against cucumber mosaic virus by using ozone. J. Virol. Methods 139: 71-77 (2007).

Sun J, Sayyar B, Butler JE, Pharkya P, Fahland TR, Famili I, Schilling CH, Lovley DR, Mahadevan R. Genome-scale constraint-based modeling of Geobacter metallireducens. BMC Syst. Biol. 3: 15 (2009).

Sun L, Ruppert M, Sheludko Y, Warzecha H, Zhao Y, Stockigt J. Purification, cloning, functional expression and characterization of perakine reductase: the first example from the AKR enzyme family, extending the alkaloidal network of the plant Rauvolfia. Plant Mol. Biol. 67: 455-467 (2008).

Suresh MR, Adiga PR. Putrescine-sensitive (artifactual) and insensitive (biosynthetic) S-adenosyl-L-methionine decarboxylase activities of Lathyrus sativus seedlings. Eur. J. Biochem. 79: 511-518 (1977).

Suzuki H, Ohnishi Y, Furusho Y, Sakuda S, Horinouchi S. Novel benzene ring biosynthesis from C3 and C4 primary metabolites by two enzymes. J. Biol. Chem. 281: 36944-36951 (2006).

Suzuki H, Reddy MS, Naoumkina M, Aziz N, May GD, Huhman DV, Sumner LW, Blount JW, Mendes P, Dixon RA. Methyl jasmonate and yeast elicitor induce differential transcriptional and metabolic re-programming in cell suspension cultures of the model legume Medicago truncatula. Planta 220: 696-707 (2005).

Suzuki H, Sawada S, Watanabe K, Nagae S, Yamaguchi MA, Nakayama T, Nishino T. Identification and characterization of a novel anthocyanin malonyltransferase from scarlet sage (Salvia splendens) flowers: an enzyme that is phylogenetically separated from other anthocyanin acyltransferases. Plant J. 38: 994-1003 (2004).

Taibi G, Schiavo MR, Gueli MC, Rindina PC, Muratore R, Nicotra CM. Rapid and simultaneous high-performance liquid chromatography assay of polyamines and monoacetylpolyamines in biological specimens. J. Chromatogr. B. Biomed. Sci. Appl. 745: 431-437 (2000).

Takeda K, Sato S, Kobayashi H, Kanaitsuka Y, Ueno M, Kinoshita T, Tazaki H, Fujimori T. The anthocyanin responsible for purplish blue flower colour of Aconitum chinense. Phytochemistry 36: 613-616 (1994).

Takeda T, Yoshimura K, Ishikawa T, Shigeoka S. Purification and characterization of ascorbate peroxidase in Chlorella vulgaris. Biochimie 80: 295-301 (1998).

Tan J, Bednarek P, Liu J, Schneider B, Svatos A, Hahlbrock K. Universally occurring phenylpropanoid and species-specific indolic metabolites in infected and uninfected Arabidopsis thaliana roots and leaves. Phytochemistry 65: 691-699 (2004).

Tanaka Y, Sano T, Tamaoki M, Nakajima N, Kondo N, Hasezawa S. Cytokinin and auxin inhibit abscisic acid-induced stomatal closure by enhancing ethylene production in Arabidopsis. J. Exp. Bot. 57: 2259-2266 (2006).

Tardioli PW, Fernandez-Lafuente R, Guisan JM, Giordano RL. Design of new immobilized-stabilized carboxypeptidase a derivative for production of aromatic free hydrolysates of proteins. Biotechnol. Prog. 19: 565-574 (2003).

Taskova RM, Gotfredsen CH, Jensen SR. Chemotaxonomy of Veroniceae and its allies in the Plantaginaceae. Phytochemistry 67: 286-301 (2006).

Taylor JL, Zaharia LI, Chen H, Anderson E, Abrams SR. Biotransformation of adenine and cytokinins by the rhizobacterium Serratia proteamaculans. Phytochemistry 67: 1887-1894 (2006).

Teles HL, Sordi R, Silva GH, Castro-Gamboa I, Bolzani VD, Pfenning LH, Magalhaes de Abreu L, Costa-Neto CM, Young MC, Araujo AR. Aromatic compounds produced by Periconia atropurpurea, an endophytic fungus associated with Xylopia aromatica. Phytochemistry 67: 2686-2690 (2006).

Terao M, Kurosaki M, Saltini G, Demontis S, Marini M, Salmona M, Garattini E. Cloning of the cDNAs coding for two novel molybdo-flavoproteins showing high similarity with aldehyde oxidase and xanthine oxidoreductase. J. Biol. Chem. 275: 30690-30700 (2000).

Terasaka K, Sakai K, Sato F, Yamamoto H, Yazaki K. Thalictrum minus cell cultures and ABC-like transporter. Phytochemistry 62: 483-489 (2003).

Tewari YB, Jensen PY, Kishore N, Mayhew MP, Parsons JF, Eisenstein E, Goldberg RN. Thermodynamics of reactions catalyzed by PABA synthase. Biophys. Chem. 96: 33-51 (2002).

Thapper A, Behrens A, Fryxelius J, Johansson MH, Prestopino F, Czaun M, Rehder D, Nordlander E. Synthesis and characterization of molybdenum oxo complexes of two tripodal ligands: reactivity studies of a functional model for molybdenum oxotransferases. Dalton Trans. 21: 3566-3571 (2005).

Theis N. Fragrance of Canada thistle (Cirsium arvense) attracts both floral herbivores and pollinators. J. Chem. Ecol. 32: 917-927 (2006).

Thornalley PJ. Isothiocyanates: mechanism of cancer chemopreventive action. Anti-Cancer Drugs 13: 331-338 (2002).

Tiryaki I, Staswick PE. An Arabidopsis mutant defective in jasmonate response is allelic to the auxin-signaling mutant axr1. Plant Physiol. 130: 887-894 (2002).

Tiwari N, Yadav AK, Srivastava P, Shanker K, Verma RK, Gupta MM. Iridoid glycosides from Gmelina arborea. Phytochemistry 69: 2387-2390 (2008).

Torry-Smith M, Sommer P, Ahring BK. Purification of bioethanol effluent in an UASB reactor system with simultaneous biogas formation. Biotechnol. Bioeng. 84: 7-12 (2003).

Treimer JF, Zenk MH. Purification and properties of strictosidine synthase, the key enzyme in indole alkaloid formation. Eur. J. Biochem. 101: 225-233 (1979).

Trimboli AJ, Quinn GB, Smith ET, Barber MJ. Thiol modification and site directed mutagenesis of the flavin domain of spinach NADH:nitrate reductase. Arch. Biochem. Biophys. 331: 117-126 (1996).

Tripathi BN, Gaur JP. Relationship between copper- and zinc-induced oxidative stress and proline accumulation in Scenedesmus sp. Planta 219: 397-404 (2004).

Tsou AY, Ransom SC, Gerlt JA, Buechter DD, Babbitt PC, Kenyon GL. Mandelate pathway of Pseudomonas putida: sequence relationships involving mandelate racemase, (S)-mandelate dehydrogenase, and benzoylformate decarboxylase and expression of benzoylformate decarboxylase in Escherichia coli. Biochemistry 29: 9856-9862 (1990).

Tsuge H, Nakano Y, Onishi H, Futamura Y, Ohashi K. A novel purification and some properties of rat liver mitochondrial choline dehydrogenase. Biochim. Biophys. Acta 614: 274-284 (1980).

Tunnicliff G, Crites GJ. Chemical inactivation of bacterial GABA aminotransferase. Biochem. Mol. Biol. Int. 46: 43-54 (1998).

Ullrich R, Hofrichter M. The haloperoxidase of the agaric fungus Agrocybe aegerita hydroxylates toluene and naphthalene. FEBS Lett. 579: 6247-6250 (2005).

Underwood BA, Tieman DM, Shibuya K, Dexter RJ, Loucas HM, Simkin AJ, Sims CA, Schmelz EA, Klee HJ, Clark DG. Ethylene-regulated floral volatile synthesis in petunia corollas. Plant Physiol. 138: 255-266 (2005).

Uno I, Matsumoto K, Adachi K, Ishikawa T. Regulation of NAD-dependent glutamate dehydrogenase by protein kinases in Saccharomyces cerevisiae. J. Biol. Chem. 259: 1288-1293 (1984).

Vaidya CM, Wright JE, Rosowsky A. Synthesis and in vitro antitumor activity of new deaza analogues of the nonpolyglutamatable antifolate N(alpha)-(4-amino-4-deoxypteroyl)-N(delta)-hemiphthaloyl-L-ornithine (PT523). J. Med. Chem. 45: 1690-1696 (2002).

van Beilen JB, Poirier Y. Production of renewable polymers from crop plants. Plant J. 54: 684-701 (2008).

van den Hombergh JP, Moore JD, Charles IG, Hawkins AR. Overproduction in Escherichia coli of the dehydroquinate synthase domain of the Aspergillus nidulans pentafunctional AROM protein. Biochem. J. 284: 861-867 (1992).

van der Meer JR, Sentchilo V. Genomic islands and the evolution of catabolic pathways in bacteria. Curr. Opin. Biotechnol. 14: 248-254 (2003).

Van Moerkercke A, Schauvinhold I, Pichersky E, Haring MA, Schuurink RC. A plant thiolase involved in benzoic acid biosynthesis and volatile benzenoid production. Plant J. Jun 15 [Epub ahead of print] (2009).

Vander Mijnsbrugge K, Beeckman H, De Rycke R, Van Montagu M, Engler G, Boerjan W. Phenylcoumaran benzylic ether reductase, a prominent poplar xylem protein, is strongly associated with phenylpropanoid biosynthesis in lignifying cells. Planta 211: 502-509 (2000).

Vander Mijnsbrugge K, Meyermans H, Van Montagu M, Bauw G, Boerjan W. Wood formation in poplar: identification, characterization, and seasonal variation of xylem proteins. Planta 210: 589-598 (2000).

Vanhaelen N, Haubruge E, Lognay G, Francis F. Hoverfly glutathione S-transferases and effect of Brassicaceae secondary metabolites. Pest. Biochem. Physiol. 71: 170-177 (2001).

Veach YK, Martin RC, Mok DW, Malbeck J, Vankova R, Mok MC. O-glucosylation of cis-zeatin in maize. Characterization of genes, enzymes, and endogenous cytokinins. Plant Physiol. 131: 1374-1380 (2003).

Veit S, Worle JM, Nurnberger T, Koch W, Seitz HU. A novel protein elicitor (PaNie) from Pythium aphanidermatum induces multiple defense responses in carrot, Arabidopsis, and tobacco. Plant Physiol. 127: 832-841 (2001).

Velasco-Garcia R, Zaldivar-Machorro VJ, Mujica-Jimenez C, Gonzalez-Segura L, Munoz-Clares RA. Disulfiram irreversibly aggregates betaine aldehyde dehydrogenase. A potential target for antimicrobial agents against Pseudomonas aeruginosa. Biochem. Biophys. Res. Commun. 341: 408-415 (2006).

Venglat SP, Sawhney VK. Benzylaminopurine induces phenocopies of floral meristem and organ identity mutants in wild-type Arabidopsis plants. Planta 198: 480-487 (1996).

Vera-Estrella R, Miranda-Vergara MC, Barkla BJ. Zinc tolerance and accumulation in stable cell suspension cultures and in vitro regenerated plants of the emerging model plant Arabidopsis halleri (Brassicaceae). Planta 229: 977-986 (2009).

Verdonk JC, Ric de Vos CH, Verhoeven HA, Haring MA, van Tunen AJ, Schuurink RC. Regulation of floral scent production in petunia revealed by targeted metabolomics. Phytochemistry 62: 997-1008 (2003).

Viitanen PV, Devine AL, Khan MS, Deuel DL, Van Dyk DE, Daniell H. Metabolic engineering of the chloroplast genome using the Echerichia coli ubiC gene reveals that chorismate is a readily abundant plant precursor for p-hydroxybenzoic acid biosynthesis. Plant Physiol. 136: 4048-4060 (2004).

Vivian-Smith A, Koltunow AM. Genetic analysis of growth-regulator-induced parthenocarpy in Arabidopsis. Plant Physiol. 121: 437-452 (1999).

von Stedingk EM, Pavlov PF, Grinkevich VA, Glaser E. Mitochondrial protein import: modification of sulfhydryl groups of the inner mitochondrial membrane import machinery in Solanum tuberosum inhibits protein import. Plant Mol. Biol. 35: 809-820 (1997).

Wakabayashi Y, Yamada R, Iwashima A. Factors stabilizing pyrroline-5-carboxylate synthase of rat intestine mucosa at a physiological temperature. Arch. Biochem. Biophys. 238: 464-468 (1985).

Walker K, Croteau R. Taxol biosynthesis: molecular cloning of a benzoyl-CoA:taxane 2alpha-O-benzoyltransferase cDNA from taxus and functional expression in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. 97: 13591-13596 (2000).

Walker K, Croteau R. Taxol biosynthetic genes. Phytochemistry 58: 1-7 (2001).

Walker K, Ketchum RE, Hezari M, Gatfield D, Goleniowski M, Barthol A, Croteau R. Partial purification and characterization of acetyl coenzyme A: taxa-4(20),11(12)-dien-5alpha-ol O-acetyl transferase that catalyzes the first acylation step of taxol biosynthesis. Arch. Biochem. Biophys. 364: 273-279 (1999).

Walker K, Long R, Croteau R. The final acylation step in taxol biosynthesis: cloning of the taxoid C13-side-chain N-benzoyltransferase from Taxus. Proc. Natl. Acad. Sci. U.S.A. 99: 9166-9171 (2002).

Wang CZ, Maier UH, Keil M, Zenk MH, Bacher A, Rohdich F, Eisenreich W. Phenylalanine-independent biosynthesis of 1,3,5,8-tetrahydroxyxanthone. A retrobiosynthetic NMR study with root cultures of Swertia chirata. Eur. J. Biochem. 270: 2950-2958 (2003).

Wang G, Xu Y. Hypocotyl-based Agrobacterium-mediated transformation of soybean (Glycine max) and application for RNA interference. Plant Cell Rep. 27: 1177-1184 (2008).

Wang J, Buss JL, Chen GH, Ponka P, Pantopoulos K. The prolyl 4-hydroxylase inhibitor ethyl-3,4-dihydroxybenzo ate generates effective iron deficiency in cultured cells. FEBS Lett. 529: 309-312 (2002).

Wang J, Di Y, Yang X, Li S, Wang Y, Hao X. Hydroquinone diglycoside acyl esters from the stems of Glycosmis pentaphylla. Phytochemistry 67: 486-491 (2006).

Wang J, Luca VD. The biosynthesis and regulation of biosynthesis of Concord grape fruit esters, including 'foxy' methylanthranilate. Plant J. 44: 606-619 (2005).

Wang X, Iino M. Interaction of cryptochrome 1, phytochrome, and ion fluxes in blue-light-induced shrinking of Arabidopsis hypocotyl protoplasts. Plant Physiol. 117: 1265-1279 (1998).

Warashina T, Nagatani Y, Noro T. Constituents from the bark of Tabebuia impetiginosa. Phytochemistry 65: 2003-2011 (2004).

Warton B, Matthiessen JN, Shackleton MA. Glucosinolate content and isothiocyanate evolution - Two measures of the biofumigation potential of plants. J. Agric. Food Chem. 49: 5244-5250 (2001).

Watabe S, Hiroi T, Yamamoto Y, Fujioka Y, Hasegawa H, Yago N, Takahashi SY. SP-22 is a thioredoxin-dependent peroxide reductase in mitochondria. Eur. J. Biochem. 249: 52-60 (1997).

Watahiki MK, Yamamoto KT. The massugu1 mutation of Arabidopsis identified with failure of auxin-induced growth curvature of hypocotyl confers auxin insensitivity to hypocotyl and leaf. Plant Physiol. 115: 419-426 (1997).

Watts CA, Ridley H, Condie KL, Leaver JT, Richardson DJ, Butler CS. Selenate reduction by Enterobacter cloacae SLD1a-1 is catalysed by a molybdenum-dependent membrane-bound enzyme that is distinct from the membrane- bound nitrate reductase. FEMS Microbiol. Lett. 228: 273-279 (2003).

Weid M, Ziegler J, Kutchan TM. The roles of latex and the vascular bundle in morphine biosynthesis in the opium poppy, Papaver somniferum. Proc. Natl. Acad. Sci. U.S.A. 101: 13957-13962 (2004).

Welch RM, Norvell WA. Growth and nutrient uptake by barley (Hordeum vulgare L. cv Herta): studies using an N-(2-hydroxyethyl)ethylenedinitrilotriacetic acid-buffered nutrient solution technique. II. Role of zinc in the uptake and root leakage of mineral nutrients. Plant Physiol. 101: 627-631 (1993).

Welchen E, Chan RL, Gonzalez DH. The promoter of the Arabidopsis nuclear gene COX5b-1, encoding subunit 5b of the mitochondrial cytochrome c oxidase, directs tissue-specific expression by a combination of positive and negative regulatory elements. J. Exp. Bot. 55: 1997-2004 (2004).

White WE Jr, Yielding LK, Krumdieck CL. Folates as inhibitors of glutamate dehydrogenase. Biochim. Biophys. Acta 429: 689-693 (1976).

Wildermuth MC. Variations on a theme: synthesis and modification of plant benzoic acids. Curr. Opin. Plant Biol. 9: 288-296 (2006).

Wilkin JM, Soetaert K, Stelandre M, Buyssens P, Castillo G, Demoulin V, Bottu G, Laneelle MA, Daffe M, De Bruyn J. Overexpression, purification and characterization of Mycobacterium bovis BCG alcohol dehydrogenase. Eur. J. Biochem. 262: 299-307 (1999).

Wittstock U, Halkier BA. Cytochrome P450 CYP79A2 from Arabidopsis thaliana L. catalyzes the conversion of L-phenylalanine to phenylacetaldoxime in the biosynthesis of benzylglucosinolate. J. Biol. Chem. 275: 14659-14666 (2000).

Woo KL, Ahan YK. Determination of protein amino acids as benzylthiocarbamyl derivatives compared with phenylthiocarbamyl derivatives by reversed-phase high-performance liquid chromatography, ultraviolet detection and precolumn derivatization. J. Chromatogr. A. 740: 41-50 (1996).

Wright GA, Lutmerding A, Dudareva N, Smith BH. Intensity and the ratios of compounds in the scent of snapdragon flowers affect scent discrimination by honeybees (Apis mellifera). J. Comp. Physiol. A. Neuroethol. Sens. Neural. Behav. Physiol. 191: 105-114 (2005).

Wu K, Cossins EA, King J. Folate metabolism in Datura innoxia. In vivo and in vitro folylpolyglutamate synthesis in wild-type and methotrexate-resistant cells. Plant Physiol. 104: 373-380 (1994).

Wu M, Wu P, Liu M, Xie H, Jiang Y, Wei X. Iridoids from Gentiana loureirii. Phytochemistry 70: 746-750 (2009).

Wu TS, Leu YL, Hsu HC, Ou LF, Chen CC, Chen CF, Ou JC, Wu YC. Constituents and cytotoxic principles of Nothapodytes foetida. Phytochemistry 39: 383-385 (1995).

Wu XQ, Li XG, Zhang XS. Molecular analysis of hormone-regulated petal regeneration in Petunia. Plant Cell Rep. 27: 1169-1176 (2008).

Wu ZF, Du GC, Chen J. Effects of culture conditions on coenzyme Q10 production by Rhizobium radiobacter by metabolic flux analysis. Wei Sheng Wu Xue Bao 45: 231-235 (2005).

Xia Y, Nikolau BJ, Schnable PS. Developmental and hormonal regulation of the Arabidopsis CER2 gene that codes for a nuclear-localized protein required for the normal accumulation of cuticular waxes. Plant Physiol. 115: 925-937 (1997).

Xie Z, Zhang ZL, Hanzlik S, Cook E, Shen QJ. Salicylic acid inhibits gibberellin-induced alpha-amylase expression and seed germination via a pathway involving an abscisic-acid-inducible WRKY gene. Plant Mol. Biol. 64: 293-303 (2007).

Xu N, Fan X, Yan X, Li X, Niu R, Tseng CK. Antibacterial bromophenols from the marine red alga Rhodomela confervoides. Phytochemistry 62: 1221-1224 (2003).

Yaeno T, Iba K. BAH1/NLA, a RING-type ubiquitin E3 ligase, regulates the accumulation of salicylic acid and immune responses to Pseudomonas syringae DC3000. Plant Physiol. 148: 1032-1041 (2008).

Yahyaoui FE, Wongs-Aree C, Latche A, Hackett R, Grierson D, Pech JC. Molecular and biochemical characteristics of a gene encoding an alcohol acyl-transferase involved in the generation of aroma volatile esters during melon ripening. Eur. J. Biochem. 269: 2359-2366 (2002).

Yamaguchi LF, Lago JH, Tanizaki TM, Mascio PD, Kato MJ. Antioxidant activity of prenylated hydroquinone and benzoic acid derivatives from Piper crassinervium Kunth. Phytochemistry 67: 1838-1843 (2006).

Yamamoto H, Hori M, Kuwajima H, Inoue K. Formation of benzoquinol moiety in cornoside by salidroside mono-oxygenase, a cytochrome P450 enzyme, from Abeliophyllum distichumcell suspension cultures. Planta 216: 432-436 (2003).

Yang Q, Grimmig B, Matern U. Anthranilate N-hydroxycinnamoyl/benzoyltransferase gene from carnation: rapid elicitation of transcription and promoter analysis. Plant Mol. Biol. 38: 1201-1214 (1998).

Yang Q, Reinhard K, Schiltz E, Matern U. Characterization and heterologous expression of hydroxycinnamoyl/benzoyl-CoA:anthranilate N-hydroxycinnamoyl/benzoyltransferase from elicited cell cultures of carnation, Dianthus caryophyllus L. Plant Mol. Biol. 35: 777-789 (1997).

Yang SJ, Cho EH, Choi MM, Lee HJ, Huh JW, Choi SY, Cho SW. Critical role of the cysteine 323 residue in the catalytic activity of human glutamate dehydrogenase isozymes. Mol. Cells 19: 97-103 (2005).

Ye QZ, Liu J, Walsh CT. p-Aminobenzoate synthesis in Escherichia coli: purification and characterization of PabB as aminodeoxychorismate synthase and enzyme X as aminodeoxychorismate lyase. Proc. Natl. Acad. Sci. U.S.A. 87: 9391-9395 (1990).

Ye ZH, Varner JE. Gene expression patterns associated with in vitro tracheary element formation in isolated single mesophyll cells of Zinnia elegans. Plant Physiol. 103: 805-813 (1993).

Yeh CM, Chien PS, Huang HJ. Distinct signalling pathways for induction of MAP kinase activities by cadmium and copper in rice roots. J. Exp. Bot. 58: 659-671 (2007).

Yeung CH, Barfield JP, Cooper TG. The role of anion channels and Ca2+ in addition to K+ channels in the physiological volume regulation of murine spermatozoa. Mol. Reprod. Dev. 71: 368-379 (2005).

Yeung KK, Lucy CA. Ultrahigh-resolution capillary electrophoretic separation with indirect ultraviolet detection: isotopic separation of [14N]- and [15N]ammonium. Electrophoresis 20: 2554-2559 (1999).

Yu TW, Muller R, Muller M, Zhang X, Draeger G, Kim CG, Leistner E, Floss HG. Mutational analysis and reconstituted expression of the biosynthetic genes involved in the formation of 3-amino-5-hydroxybenzoic acid, the starter unit of rifamycin biosynthesis in Amycolatopsis mediterranei S699. J. Biol. Chem. 276: 12546-12555 (2001).

Yu X, Sukumaran S, Marton L. Differential expression of the Arabidopsis Nia1 and Nia2 genes. Cytokinin-induced nitrate reductase activity is correlated with increased Nia1 transcription and mRNA levels. Plant Physiol. 116: 1091-1096 (1998).

Yu XC, Li MJ, Gao GF, Feng HZ, Geng XQ, Peng CC, Zhu SY, Wang XJ, Shen YY, Zhang DP. Abscisic acid stimulates a calcium-dependent protein kinase in grape berry. Plant Physiol. 140: 558-579 (2006).

Zahiri HS, Yoon SH, Keasling JD, Lee SH, Won Kim S, Yoon SC, Shin YC. Coenzyme Q10 production in recombinant Escherichia coli strains engineered with a heterologous decaprenyl diphosphate synthase gene and foreign mevalonate pathway. Metab. Eng. 8: 406-416 (2006).

Zamora R, Alaiz M, Hidalgo FJ. Feed-back inhibition of oxidative stress by oxidized lipid/amino acid reaction products. Biochemistry 36: 15765-15771 (1997).

Zasada IA, Ferris H. Sensitivity of Meloidogyne javanica and Tylenchulus semipenetrans to isothiocyanates in laboratory assays. Phytopathology 93: 747-750 (2003).

Zenser N, Dreher KA, Edwards SR, Callis J. Acceleration of Aux/IAA proteolysis is specific for auxin and independent of AXR1. Plant J. 35: 285-294 (2003).

Zhang J, Okubo A, Yamazaki S. Measurement of free choline in plant leaves by capillary electrophoresis. Biosci. Biotechnol. Biochem. 65: 2573-2576 (2001).

Zhang JH, Okubo A, Yamazaki S. Determination of betaine aldehyde in plants by low-pH capillary electrophoresis. Bunseki Kagaku 46: 509-511 (1997).

Zhang K, Letham DS, John PC. Cytokinin controls the cell cycle at mitosis by stimulating the tyrosine dephosphorylation and activation of p34cdc2-like H1 histone kinase. Planta 200: 2-12 (1996).

Zhang L, Paakkarinen V, van Wijk KJ, Aro EM. Biogenesis of the chloroplast-encoded D1 protein. Regulation of translation elongation, insertion, and assembly into photosystem II. Plant Cell 12: 1769-1782 (2000).

Zhang X, Ye W, Zhao S, Che CT. Isoquinoline and isoindole alkaloids from Menispermum dauricum. Phytochemistry 65: 929-932 (2004).

Zhong JJ, Yue CJ. Plant cells: secondary metabolite heterogeneity and its manipulation. Adv. Biochem. Eng. Biotechnol. 100: 53-88 (2005).

Zhong R, Morrison WH 3rd, Himmelsbach DS, Poole FL 2nd, Ye ZH. Essential role of caffeoyl coenzyme A O-methyltransferase in lignin biosynthesis in woody poplar plants. Plant Physiol. 124: 563-578 (2000).

Zhou J, Hartmann S, Shepherd BK, Poulton JE. Investigation of the microheterogeneity and aglycone specificity-conferring residues of black cherry prunasin hydrolases. Plant Physiol. 129: 1252-1264 (2002).

Zidorn C, Ellmerer EP, Sturm S, Stuppner H. Tyrolobibenzyls E and F from Scorzonera humilis and distribution of caffeic acid derivatives, lignans and tyrolobibenzyls in European taxa of the subtribe Scorzonerinae (Lactuceae, Asteraceae). Phytochemistry 63: 61-67 (2003).

Zidorn C, Grass S, Ellmerer EP, Ongania KH, Stuppner H. Stilbenoids from Tragopogon orientalis. Phytochemistry 67: 2182-2188 (2006).

Ziegler J, Diaz-Chavez ML, Kramell R, Ammer C, Kutchan TM. Comparative macroarray analysis of morphine containing Papaver somniferum and eight morphine free Papaver species identifies an O-methyltransferase involved in benzylisoquinoline biosynthesis. Planta 222: 458-471 (2005).

Ziegler J, Facchini PJ, GeiBler R, Schmidt J, Ammer C, Kramell R, Voigtlander S, Gesell A, Pienkny S, Brandt W. Evolution of morphine biosynthesis in opium poppy. Phytochemistry Aug 6 [Epub ahead of print] (2009).

Ziegler J, Voigtlander S, Schmidt J, Kramell R, Miersch O, Ammer C, Gesell A, Kutchan TM. Comparative transcript and alkaloid profiling in Papaver species identifies a short chain dehydrogenase/reductase involved in morphine biosynthesis. Plant J. 48: 177-192 (2006).

Zocher G, Wiesand U, Schulz GE. High resolution structure and catalysis of O-acetylserine sulfhydrylase isozyme B from Escherichia coli. FEBS J. 274: 5382-5389 (2007).

Zon J, Amrhein N, Gancarz R. Inhibitors of phenylalanine ammonia-lyase: 1-aminobenzylphosphonic acids substituted in the benzene ring. Phytochemistry 59: 9-21 (2002).

Zonia L, Cordeiro S, Tupy J, Feijo JA. Oscillatory chloride efflux at the pollen tube apex has a role in growth and cell volume regulation and is targeted by inositol 3,4,5,6-tetrakisphosphate. Plant Cell 14: 2233-2249 (2002).

Zorn H, Fischer-Zorn M, Berger RG. A labeling study to elucidate the biosynthesis of 4-(4-hydroxyphenyl)-butan-2-one (raspberry ketone) by Nidula niveo-tomentosa. Appl. Environ. Microbiol. 69: 367-372 (2003).

Zubieta C, Ross JR, Koscheski P, Yang Y, Pichersky E, Noel JP. Structural basis for substrate recognition in the salicylic acid carboxyl methyltransferase family. Plant Cell 15: 1704-1716 (2003).

Zubo YO, Yamburenko MV, Selivankina SY, Shakirova FM, Avalbaev AM, Kudryakova NV, Zubkova NK, Liere K, Kulaeva ON, Kusnetsov VV, Borner T. Cytokinin stimulates chloroplast transcription in detached barley leaves. Plant Physiol. 148: 1082-1093 (2008).

Zuker A, Tzfira T, Ben-Meir H, Ovadis M, Shklarman E, Itzhaki H, Forkmann G, Martens S, Neta-Sharir I, Weiss D, Vainstein A. Modification of flower color and fragrance by antisense suppression of the flavanone 3-hydroxylase gene. Mol. Breed. 9: 33-41 (2002).

Zulak KG, Khan MF, Alcantara J, Schriemer DC, Facchini PJ. Plant defense responses in opium poppy cell cultures revealed by liquid chromatography-tandem mass spectrometry proteomics. Mol. Cell. Proteomics 8: 86-98 (2009).

Number of references = 699

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