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Nitrate Assimilation
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Glu, Gln, Asn, Gly, Ser
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Asp, Ala, GABA
Val, Leu, Ileu, Thr, Lys
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References
HORT640 - Metabolic Plant Physiology

References, anthocyanin or flavonoid

Abdulrazzak N, Pollet B, Ehlting J, Larsen K, Asnaghi C, Ronseau S, Proux C, Erhardt M, Seltzer V, Renou JP, Ullmann P, Pauly M, Lapierre C, Werck-Reichhart D 2006 A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth. Plant Physiol. 140: 30-48.

Abrahams S, Lee E, Walker AR, Tanner GJ, Larkin PJ, Ashton AR 2003 The Arabidopsis TDS4 gene encodes leucoanthocyanidin dioxygenase (LDOX) and is essential for proanthocyanidin synthesis and vacuole development. Plant J. 35: 624-636.

Achike FI, Kwan CY 2003 Nitric oxide, human diseases and the herbal products that affect the nitric oxide signalling pathway. Clin. Exp. Pharmacol. Physiol. 30: 605-615.

Achnine L, Huhman DV, Farag MA, Sumner LW, Blount JW, Dixon RA 2005 Genomics-based selection and functional characterization of triterpene glycosyltransferases from the model legume Medicago truncatula. Plant J. 41: 875-887.

Aharoni A, De Vos CH, Wein M, Sun Z, Greco R, Kroon A, Mol JN, O'Connell AP 2001 The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco. Plant J. 28: 319-332.

Ahmad G, Yadav PP, Maurya R 2004 Furanoflavonoid glycosides from Pongamia pinnata fruits. Phytochemistry 65: 921-924.

Ahmad M, Galland P, Ritz T, Wiltschko R, Wiltschko W 2007 Magnetic intensity affects cryptochrome-dependent responses in Arabidopsis thaliana. Planta 225: 615-624.

Ahmad M, Jarillo JA, Cashmore AR 1998 Chimeric proteins between cr y1 and cr y2 Arabidopsis blue light photoreceptors indicate overlapping functions and varying protein stability. Plant Cell 10: 197-208.

Akashi T, Aoki T, Ayabe S 2005 Molecular and biochemical characterization of 2-hydroxyisoflavanone dehydratase. Involvement of carboxylesterase-like proteins in leguminous isoflavone biosynthesis. Plant Physiol. 137: 882-891.

Akashi T, Aoki T, Ayabe Si 1999 Cloning and functional expression of a cytochrome P450 cDNA encoding 2-hydroxyisoflavanone synthase involved in biosynthesis of the isoflavonoid skeleton in licorice. Plant Physiol. 121: 821-828.

Akashi T, Vanetten HD, Sawada Y, Wasmann CC, Uchiyama H, Ayabe SI 2006 Catalytic specificity of pea O-methyltransferases suggests gene duplication for (+)-pisatin biosynthesis. Phytochemistry 67: 2525-2530.

Al-Hammadi AS, Sreelakshmi Y, Negi S, Siddiqi I, Sharma R 2003 The polycotyledon mutant of tomato shows enhanced polar auxin transport. Plant Physiol. 133: 113-125.

Albert KR, Mikkelsen TN, Ro-Poulsen H 2005 Effects of ambient versus reduced UV-B radiation on high arctic Salix arctica assessed by measurements and calculations of chlorophyll a fluorescence parameters from fluorescence transients. Physiol. Plant. 124: 208-226.

Albert S, Delseny M, Devic M 1997 BANYULS, a novel negative regulator of flavonoid biosynthesis in the Arabidopsis seed coat. Plant J. 11: 289-299.

Albrecht H, Yoder JI, Phillips DA 1999 Flavonoids promote haustoria formation in the root parasite Triphysaria versicolor. Plant Physiol. 119: 585-592.

Alfenito MR, Souer E, Goodman CD, Buell R, Mol J, Koes R, Walbot V 1998 Functional complementation of anthocyanin sequestration in the vacuole by widely divergent glutathione S-transferases. Plant Cell 10: 1135-1149.

Alleman M, Kermicle JL 1993 Somatic variegation and germinal mutability reflect the position of transposable element Dissociation within the maize R gene. Genetics 135: 189-203.

Aloni R, Schwalm K, Langhans M, Ullrich CI 2003 Gradual shifts in sites of free-auxin production during leaf-primordium development and their role in vascular differentiation and leaf morphogenesis in Arabidopsis. Planta 216: 841-853.

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Ananvoranich S, Varin L, Gulick P, Ibrahim R 1994 Cloning and regulation of flavonol 3-sulfotransferase in cell-suspension cultures of Flaveria bidentis. Plant Physiol. 106: 485-491.

Andersen OM, Fossen T, Torskangerpoll K, Fossen A, Hauge U 2004 Anthocyanin from strawberry (Fragaria ananassa) with the novel aglycone, 5-carboxypyranopelargonidin. Phytochemistry 65: 405-410.

Ando T, Tatsuzawa F, Saito N, Takahashi M, Tsunashima Y, Numajir H, Watanabe H, Kokubun H, Hara R, Seki H, Hashimoto G 2000 Differences in the floral anthocyanin content of red petunias and Petunia exserta. Phytochemistry 54: 495-501.

Attridge TH, Stewart GR, Smith H 1971 End-product inhibition of Pisum phenylalanine ammonia-lyase by the Pisum flavonoids. FEBS Lett. 17: 84-86.

Avila J, Nieto C, Canas L, Benito MJ, Paz-Ares J 1993 Petunia hybrida genes related to the maize regulatory C1 gene and to animal myb proto-oncogenes. Plant J. 3: 553-562.

Awika JM, Rooney LW 2004 Sorghum phytochemicals and their potential impact on human health. Phytochemistry 65: 1199-1221.

Aziz N, Paiva NL, May GD, Dixon RA 2005 Transcriptome analysis of alfalfa glandular trichomes. Planta 221: 28-38.

Bagchi D, Garg A, Krohn RL, Bagchi M, Tran MX, Stohs SJ 1997 Oxygen free radical scavenging abilities of vitamins C and E, and a grape seed proanthocyanidin extract in vitro. Res. Commun. Mol. Pathol. Pharmacol. 95: 179-189.

Bai Y, Souleimanov A, Smith DL 2002 An inducible activator produced by a Serratia proteamaculans strain and its soybean growth-promoting activity under greenhouse conditions. J. Exp. Bot. 53: 1495-1502.

Baker RF, Braun DM 2007 tie-dyed1 Functions non-cell autonomously to control carbohydrate accumulation in maize leaves. Plant Physiol. 144: 867-878.

Baldridge GD, O'Neill NR, Samac DA 1998 Alfalfa (Medicago sativa L.) resistance to the root-lesion nematode, Pratylenchus penetrans: defense-response gene mRNA and isoflavonoid phytoalexin levels in roots. Plant Mol. Biol. 38: 999-1010.

Ban Y, Honda C, Bessho H, Pang XM, Moriguchi T 2007 Suppression subtractive hybridization identifies genes induced in response to UV-B irradiation in apple skin: isolation of a putative UDP-glucose 4-epimerase. J. Exp. Bot. 58: 1825-1834.

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Bariola PA, MacIntosh GC, Green PJ 1999 Regulation of S-like ribonuclease levels in Arabidopsis. Antisense inhibition of RNS1 or RNS2 elevates anthocyanin accumulation. Plant Physiol. 119: 331-342.

Basile A, Sorbo S, Lopez-Saez JA, Castaldo Cobianchi R 2003 Effects of seven pure flavonoids from mosses on germination and growth of Tortula muralis HEDW. (Bryophyta) and Raphanus sativus L. (Magnoliophyta). Phytochemistry 62: 1145-1151.

Bate NJ, Orr J, Ni W, Meromi A, Nadler-Hassar T, Doerner PW, Dixon RA, Lamb CJ, Elkind Y 1994 Quantitative relationship between phenylalanine ammonia-lyase levels and phenylpropanoid accumulation in transgenic tobacco identifies a rate-determining step in natural product synthesis. Proc. Natl. Acad. Sci. U.S.A. 91: 7608-7612.

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Baumgardt RL, Oliverio KA, Casal JJ, Hoecker U 2002 SPA1, a component of phytochrome A signal transduction, regulates the light signaling current. Planta 215: 745-753.

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Bekker M, Bekker R, Brandt VE 2006 Two flavonoid glycosides and a miscellaneous flavan from the bark of Guibourtia coleosperma. Phytochemistry 67: 818-823.

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Benavides A, Bassarello C, Montoro P, Vilegas W, Piacente S, Pizza C 2007 Flavonoids and isoflavonoids from Gynerium sagittatum. Phytochemistry 68: 1277-1284.

Bennett RN, Mellon FA, Rosa EA, Perkins L, Kroon PA 2004 Profiling glucosinolates, flavonoids, alkaloids, and other secondary metabolites in tissues of Azima tetracantha L. (Salvadoraceae). J. Agric. Food Chem. 52: 5856-5862.

Bennett RN, Wenke T, Freudenberg B, Mellon FA, Ludwig-Muller J 2005 The tu8 mutation of Arabidopsis thaliana encoding a heterochromatin protein 1 homolog causes defects in the induction of secondary metabolite biosynthesis. Plant Biol. (Stuttg.) 7: 348-357.

Bennett T, Sieberer T, Willett B, Booker J, Luschnig C, Leyser O 2006 The Arabidopsis MAX pathway controls shoot branching by regulating auxin transport. Curr. Biol. 16: 553-563.

Bergman M, Perelman A, Dubinsky Z, Grossman S 2003 Scavenging of reactive oxygen species by a novel glucurinated flavonoid antioxidant isolated and purified from spinach. Phytochemistry 62: 753-762.

Beritogoli I, Magel E, Abdel-Latif A, Charpentier JP, Jay-Allemand C, Breton C 2002 Expression of genes encoding chalcone synthase, flavanone 3-hydroxylase and dihydroflavonol 4-reductase correlates with flavanol accumulation during heartwood formation in Juglans nigra. Tree Physiol. 22: 291-300.

Bernhardt J, Stich K, Schwarz-Sommer Z, Saedler H, Wienand U 1998 Molecular analysis of a second functional A1 gene (dihydroflavonol 4-reductase) in Zea mays. Plant J. 14: 483-488.

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Bharti AK, Khurana JP 1997 Mutants of Arabidopsis as tools to understand the regulation of phenylpropanoid pathway and UVB protection mechanisms. Photochem. Photobiol. 65: 765-776.

Bi JL, Felton GW, Murphy JB, Howles PA, Dixon RA, Lamb CJ 1997 Do plant phenolics confer resistance to specialist and generalist insect herbivores?. J. Agric. Food Chem. 45: 4500-4504.

Bieza K, Lois R 2001 An Arabidopsis mutant tolerant to lethal ultraviolet-B levels shows constitutively elevated accumulation of flavonoids and other phenolics. Plant Physiol. 126: 1105-1115.

Bilodeau P, Udvardi MK, Peacock WJ, Dennis ES 1999 A prolonged cold treatment-induced cytochrome P450 gene from Arabidopsis thaliana. Plant Cell Environ. 22: 791-800.

Bladergroen MR, Spaink HP 1998 Genes and signal molecules involved in the Rhizobia-Leguminoseae symbiosis. Curr. Opin. Plant Biol. 1: 353-359.

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Bodeau JP, Walbot V 1996 Structure and regulation of the maize Bronze2 promoter. Plant Mol. Biol. 32: 599-609.

Bogs J, Ebadi A, McDavid D, Robinson SP 2006 Identification of the flavonoid hydroxylases from grapevine and their regulation during fruit development. Plant Physiol. 140: 279-291.

Bohm H, Boeing H, Hempel J, Raab B, Kroke A 1998 Flavonols, flavone and anthocyanins as natural antioxidants of food and their possible role in the prevention of chronic diseases. Z. Ernahrungswiss. 37: 147-163.

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Borevitz JO, Xia Y, Blount J, Dixon RA, Lamb C 2000 Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis. Plant Cell 12: 2383-2394.

Boss PK, Davies C, Robinson SP 1996 Analysis of the expression of anthocyanin pathway genes in developing Vitis vinifera L. cv Shiraz grape berries and the implications for pathway regulation. Plant Physiol. 111: 1059-1066.

Boss PK, Davies C, Robinson SP 1996 Expression of anthocyanin biosynthesis pathway genes in red and white grapes. Plant Mol. Biol. 32: 565-569.

Bovy A, De Vos R, Kemper M, Schijlen E, Almenar Pertejo M, Muir S, Collins G, Robinson S, Verhoeyen M, Hughes S, Santos-Buelga C, Van Tunen A 2002 High-flavonol tomatoes resulting from the heterologous expression of the maize transcription factor genes LC and C1. Plant Cell 14: 2509-2526.

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Brand S, Holscher D, Schierhorn A, Svatos A, Schroder J, Schneider B 2006 A type III polyketide synthase from Wachendorfia thyrsiflora and its role in diarylheptanoid and phenylphenalenone biosynthesis. Planta 224: 413-428.

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Broun P 2005 Transcriptional control of flavonoid biosynthesis: a complex network of conserved regulators involved in multiple aspects of differentiation in Arabidopsis. Curr. Opin. Plant Biol. 8: 272-279.

Brown DE, Rashotte AM, Murphy AS, Normanly J, Tague BW, Peer WA, Taiz L, Muday GK 2001 Flavonoids act as negative regulators of auxin transport in vivo in Arabidopsis. Plant Physiol. 126: 524-535.

Bruce W, Folkerts O, Garnaat C, Crasta O, Roth B, Bowen B 2000 Expression profiling of the maize flavonoid pathway genes controlled by estradiol-inducible transcription factors CRC and P. Plant Cell 12: 65-80.

Brugliera F, Holton TA, Stevenson TW, Farcy E, Lu CY, Cornish EC 1994 Isolation and characterization of a cDNA clone corresponding to the Rt locus of Petunia hybrida. Plant J. 5: 81-92.

Buchholz G, Ehmann B, Wellmann E 1995 Ultraviolet light inhibition of phytochrome-induced flavonoid biosynthesis and DNA photolyase formation in mustard cotyledons (Sinapis alba L.). Plant Physiol. 108: 227-234.

Buer CS, Muday GK 2004 The transparent testa4 mutation prevents flavonoid synthesis and alters auxin transport and the response of Arabidopsis roots to gravity and light. Plant Cell 16: 1191-1205.

Buer CS, Muday GK, Djordjevic MA 2007 Flavonoids are differentially taken up and transported long distances in Arabidopsis. Plant Physiol. Aug 24 [Epub ahead of print].

Buer CS, Sukumar P, Muday GK 2006 Ethylene modulates flavonoid accumulation and gravitropic responses in roots of Arabidopsis. Plant Physiol. 140: 1384-1396.

Burbulis IE, Winkel-Shirley B 1999 Interactions among enzymes of the Arabidopsis flavonoid biosynthetic pathway. Proc. Natl. Acad. Sci. U.S.A. 96: 12929-12934.

Burchard P, Bilger W, Weissenbock G 2000 Contribution of hydroxycinnamates and flavonoids to epidermal shielding of UV-A and UV-B radiation in developing rye primary leaves as assessed by ultraviolet-induced chlorophyll fluorescence measurements. Plant Cell Environ. 23: 1373-1380.

Cain CC, Saslowsky DE, Walker RA, Shirley BW 1997 Expression of chalcone synthase and chalcone isomerase proteins in Arabidopsis seedlings. Plant Mol. Biol. 35: 377-381.

Cardenas L, Aleman E, Nava N, Santana O, Sanchez F, Quinto C 2006 Early responses to Nod factors and mycorrhizal colonization in a non-nodulating Phaseolus vulgaris mutant. Planta 223: 746-754.

Carey CC, Strahle JT, Selinger DA, Chandler VL 2004 Mutations in the pale aleurone color1 regulatory gene of the Zea mays anthocyanin pathway have distinct phenotypes relative to the functionally similar TRANSPARENT TESTA GLABRA1 gene in Arabidopsis thaliana. Plant Cell 16: 450-464.

Carrera E, Holman T, Medhurst A, Peer W, Schmuths H, Footitt S, Theodoulou FL, Holdsworth MJ 2007 Gene expression profiling reveals defined functions of the ABC transporter COMATOSE late in phase II of germination. Plant Physiol. 143: 1669-1679.

Carrie C, Murcha MW, Millar AH, Smith SM, Whelan J 2007 Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are targeted either to peroxisomes or cytosol but not to mitochondria. Plant Mol. Biol. 63: 97-108.

Carson CB, Hattori T, Rosenkrans L, Vasil V, Vasil IK, Peterson PA, McCarty DR 1997 The quiescent/colorless alleles of viviparous1 show that the conserved B3 domain of VP1 is not essential for ABA-regulated gene expression in the seed. Plant J. 12: 1231-1240.

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Casati P, Walbot V 2005 Differential accumulation of maysin and rhamnosylisoorientin in leaves of high-altitude landraces of maize after UV-B exposure. Plant Cell Environ. 28: 788-799.

Chalker-Scott L 1999 Environmental significance of anthocyanins in plant stress responses. Photochem. Photobiol. 70: 1-9.

Chandler VL, Radicella JP, Robbins TP, Chen J, Turks D 1989 Two regulatory genes of the maize anthocyanin pathway are homologous: isolation of B utilizing R genomic sequences. Plant Cell 1: 1175-1183.

Chang-Quan W, Ye-Feng Z, Tao L 2005 Activity changes of calmodulin and Ca2+-ATPase during low-temperature-induced anthocyanin accumulation in Alternanthera bettzickiana. Physiol. Plant. 124: 260-266.

Chatterjee M, Sharma P, Khurana JP 2006 Cryptochrome 1 from Brassica napus is up-regulated by blue light and controls hypocotyl/stem growth and anthocyanin accumulation. Plant Physiol. 141: 61-74.

Chen F, Srinivasa Reddy MS, Temple S, Jackson L, Shadle G, Dixon RA 2006 Multi-site genetic modulation of monolignol biosynthesis suggests new routes for formation of syringyl lignin and wall-bound ferulic acid in alfalfa (Medicago sativa L.). Plant J. 48: 113-124.

Chen JC, Jiang CZ, Gookin TE, Hunter DA, Clark DG, Reid MS 2004 Chalcone synthase as a reporter in virus-induced gene silencing studies of flower senescence. Plant Mol. Biol. 55: 521-530.

Chen SM, Coe EH Jr 1977 Control of anthocyanin synthesis by the C locus in maize. Biochem. Genet. 15: 333-346.

Chimphango SB, Musil CF, Dakora FD 2003 Response of purely symbiotic and NO3-fed nodulated plants of Lupinus luteus and Vicia atropurpurea to ultraviolet-B radiation. J. Exp. Bot. 54: 1771-1784.

Choi JD, Hoshino A, Park KI, Park IS, Iida S 2007 Spontaneous mutations caused by a Helitron transposon, Hel-It1, in morning glory, Ipomoea tricolor. Plant J. 49: 924-934.

Chopra S, Athma P, Peterson T 1996 Alleles of the maize P gene with distinct tissue specificities encode Myb-homologous proteins with C-terminal replacements. Plant Cell 8: 1149-1158.

Christensen AB, Gregersen PL, Olsen CE, Collinge DB 1998 A flavonoid 7-O-methyltransferase is expressed in barley leaves in response to pathogen attack. Plant Mol. Biol. 36: 219-227.

Christensen AB, Gregersen PL, Schroder J, Collinge DB 1998 A chalcone synthase with an unusual substrate preference is expressed in barley leaves in response to UV light and pathogen attack. Plant Mol. Biol. 37: 849-857.

Christinet L, Burdet FX, Zaiko M, Hinz U, Zryd JP 2004 Characterization and functional identification of a novel plant 4,5-extradiol dioxygenase involved in betalain pigment biosynthesis in Portulaca grandiflora. Plant Physiol. 134: 265-274.

Chuck G, Robbins T, Nijjar C, Ralston E, Courtney-Gutterson N, Dooner HK 1993 Tagging and cloning of a petunia flower color gene with the maize transposable element activator. Plant Cell 5: 371-378.

Claudot AC, Ernst D, Sandermann H, Drouet A 1997 Chalcone synthase activity and polyphenolic compounds of shoot tissues from adult and rejuvenated walnut trees. Planta 203: 275-282.

Close DC, Davies NW, Beadle CL 2001 Temporal variation of tannins (galloylglucoses), flavonols and anthocyanins in leaves of Eucalyptus nitens seedlings: implications for light attenuation and antioxidant activities. Aust. J. Plant Physiol. 28: 269-278.

Cocciolone SM, Cone KC 1993 Pl-Bh, an anthocyanin regulatory gene of maize that leads to variegated pigmentation. Genetics 135: 575-588.

Coiner H, Schroder G, Wehinger E, Liu CJ, Noel JP, Schwab W, Schroder J 2006 Methylation of sulfhydryl groups: a new function for a family of small molecule plant O-methyltransferases. Plant J. 46: 193-205.

Collette VE, Jameson PE, Schwinn KE, Umaharan P, Davies KM 2004 Temporal and spatial expression of flavonoid biosynthetic genes in flowers of Anthurium andraeanum. Physiol. Plant. 122: 297-304.

Colliver SP, Morris P, Robbins MP 1997 Differential modification of flavonoid and isoflavonoid biosynthesis with an antisense chalcone synthase construct in transgenic Lotus corniculatus. Plant Mol. Biol. 35: 509-522.

Cone KC, Burr FA, Burr B 1986 Molecular analysis of the maize anthocyanin regulatory locus C1. Proc. Natl. Acad. Sci. U.S.A. 83: 9631-9635.

Cone KC, Cocciolone SM, Burr FA, Burr B 1993 Maize anthocyanin regulatory gene pl is a duplicate of c1 that functions in the plant. Plant Cell 5: 1795-1805.

Cone KC, Cocciolone SM, Moehlenkamp CA, Weber T, Drummond BJ, Tagliani LA, Bowen BA, Perrot GH 1993 Role of the regulatory gene pl in the photocontrol of maize anthocyanin pigmentation. Plant Cell 5: 1807-1816.

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Consonni G, Ronchi A, Pilu R, Gavazzi G, Dellaporta SL, Tonelli C 1997 Ectopic anthocyanin pigmentation in maize as a tool for defining interactions between homologous regulatory factors. Mol. Gen. Genet. 256: 265-276.

Cooper JE, Rao JR 1992 Localized changes in flavonoid biosynthesis in roots of Lotus pedunculatus after infection by Rhizobium loti. Plant Physiol. 100: 444-450.

Cooper-Driver GA 2001 Contributions of Jeffrey Harborne and co-workers to the study of anthocyanins. Phytochemistry 56: 229-236.

Cornwell T, Cohick W, Raskin I 2004 Dietary phytoestrogens and health. Phytochemistry 65: 995-1016.

Cortes-Cruz M, Snook M, McMullen MD 2003 The genetic basis of C-glycosyl flavone B-ring modification in maize (Zea mays L.) silks. Genome 46: 182-94.

Croft K, Juttner F, Slusarenko AJ 1993 Volatile products of the lipoxygenase pathway evolved from Phaseolus vulgaris (L.) leaves inoculated with Pseudomonas syringae pv phaseolicola. Plant Physiol. 101: 13-24.

Cummins I, Brazier-Hicks M, Stobiecki M, Franski R, Edwards R 2006 Selective disruption of wheat secondary metabolism by herbicide safeners. Phytochemistry 67: 1722-1730.

Cummins I, O'Hagan D, Jablonkai I, Cole DJ, Hehn A, Werck-Reichhart D, Edwards R 2003 Cloning, characterization and regulation of a family of phi class glutathione transferases from wheat. Plant Mol. Biol. 52: 591-603.

Curir P, Lanzotti V, Dolci M, Dolci P, Pasini C, Tollin G 2003 Purification and properties of a new S-adenosyl-L-methionine:flavonoid 4'-O-methyltransferase from carnation (Dianthus caryophyllus L.). Eur. J. Biochem. 270: 3422-3431.

Cuyckens F, Claeys M 2004 Mass spectrometry in the structural analysis of flavonoids. J. Mass Spectrom. 39: 1-15.

D'Auria JC 2006 Acyltransferases in plants: a good time to be BAHD. Curr. Opin. Plant Biol. 9: 331-340.

Dakora FD, Joseph CM, Phillips DA 1993 Alfalfa (Medicago sativa L.) root exudates contain isoflavonoids in the presence of Rhizobium meliloti. Plant Physiol. 101: 819-824.

Datta S, Hettiarachchi GH, Deng XW, Holm M 2006 Arabidopsis CONSTANS-LIKE3 is a positive regulator of red light signaling and root growth. Plant Cell 18: 70-84.

Davies GJ, Sheikh MA, Ratcliffe OJ, Coupland G, Furner IJ 1997 Genetics of homology-dependent gene silencing in Arabidopsis; a role for methylation. Plant J. 12: 791-804.

Davison PA, Hunter CN, Horton P 2002 Overexpression of beta-carotene hydroxylase enhances stress tolerance in Arabidopsis. Nature 418: 203-206.

de Lange P, van Blokland R, Kooter JM, Mol JN 1995 Suppression of flavonoid flower pigmentation genes in Petunia hybrida by the introduction of antisense and sense genes. Curr. Top. Microbiol. Immunol. 197: 57-75.

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De Luca V, St Pierre B 2000 The cell and developmental biology of alkaloid biosynthesis. Trends Plant Sci. 5: 168-173.

de Pater S, Pham K, Memelink J, Kijne J 1997 RAP-1 is an Arabidopsis MYC-like R protein homologue, that binds to G-box sequence motifs. Plant Mol. Biol. 34: 169-174.

De Schepper S, Leus L, Mertens M, Debergh P, Van Bockstaele E, De Loose M 2001 Somatic polyploidy and its consequences for flower coloration and flower morphology in azalea. Plant Cell Rep. 20: 583-590.

de Vetten N, Quattrocchio F, Mol J, Koes R 1997 The an11 locus controlling flower pigmentation in petunia encodes a novel WD-repeat protein conserved in yeast, plants, and animals. Genes Dev. 11: 1422-1434.

de Vetten N, ter Horst J, van Schaik HP, de Boer A, Mol J, Koes R 1999 A cytochrome b5 is required for full activity of flavonoid 3', 5'-hydroxylase, a cytochrome P450 involved in the formation of blue flower colors. Proc. Natl. Acad. Sci. U.S.A. 96: 778-783.

Deavours BE, Dixon RA 2005 Metabolic engineering of isoflavonoid biosynthesis in alfalfa. Plant Physiol. 138: 2245-2259.

Deavours BE, Liu CJ, Naoumkina MA, Tang Y, Farag MA, Sumner LW, Noel JP, Dixon RA 2006 Functional analysis of members of the isoflavone and isoflavanone O-methyltransferase enzyme families from the model legume Medicago truncatula. Plant Mol. Biol. 62: 715-733.

Debeaujon I, Peeters AJ, Leon-Kloosterziel KM, Koornneef M 2001 The transparent testa12 gene of Arabidopsis encodes a multidrug secondary transporter-like protein required for flavonoid sequestration in vacuoles of the seed coat endothelium. Plant Cell 13: 853-872.

Deboo GB, Albertsen MC, Taylor LP 1995 Flavanone 3-hydroxylase transcripts and flavonol accumulation are temporally coordinate in maize anthers. Plant J. 7: 703-713.

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