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N Use By Plants
Nitrate Assimilation
Ammonia Assimilation
Glu, Gln, Asn, Gly, Ser
Aminotransferases
Asp, Ala, GABA
Val, Leu, Ileu, Thr, Lys
Pro, Arg, Orn
Polyamines
Non-protein AAs
Alkaloids
Sulfate Assimilation
Cys, Met, AdoMet, ACC
His, Phe, Tyr, Tryp
Secondary Products
Onium Compounds
Enzymes
Methods
Simulation
References
HORT640 - Metabolic Plant Physiology

References, alternative oxidase

Abe F, Saito K, Miura K, Toriyama K. A single nucleotide polymorphism in the alternative oxidase gene among rice varieties differing in low temperature tolerance. FEBS Lett. 527: 181-185 (2002).

Affourtit C, Krab K, Moore AL. Control of plant mitochondrial respiration. Biochim. Biophys. Acta 1504: 58-69 (2001).

Agostino A, Heldt HW, Hatch MD. Mitochondrial respiration in relation to photosynthetic C4 acid decarboxylation in C4 species. Aust. J. Plant Physiol. 23: 1-7 (1996).

Alamillo JM, Saenz P, Garcia JA. Salicylic acid-mediated and RNA-silencing defense mechanisms cooperate in the restriction of systemic spread of plum pox virus in tobacco. Plant J. 48: 217-227 (2006).

Almeida AM, Jarmuszkiewicz W, Khomsi H, Arruda P, Vercesi AE, Sluse FE. Cyanide-resistant, ATP-synthesis-sustained, and uncoupling-protein-sustained respiration during postharvest ripening of tomato fruit. Plant Physiol. 119: 1323-1330 (1999).

Angeles Castillejo M, Amiour N, Dumas-Gaudot E, Rubiales D, Jorrin JV. A proteomic approach to studying plant response to crenate broomrape (Orobanche crenata) in pea (Pisum sativum). Phytochemistry 65: 1817-1828 (2004).

Armstrong AF, Badger MR, Day DA, Barthet MM, Smith PM, Millar AH, Whelan J, Atkin OK. Dynamic changes in the mitochondrial electron transport chain underpinning cold acclimation of leaf respiration. Plant Cell Environ. 31: 1156-1169 (2008).

Arnholdt-Schmitt B, Costa JH, de Melo DF. AOX - a functional marker for efficient cell reprogramming under stress? Trends Plant Sci. 11: 281-287 (2006).

Barr J, White WS, Chen L, Bae H, Rodermel S. The GHOST terminal oxidase regulates developmental programming in tomato fruit. Plant Cell Environ. 27: 840-852 (2004).

Bartoli CG, Gomez F, Gergoff G, Guiamet JJ, Puntarulo S. Up-regulation of the mitochondrial alternative oxidase pathway enhances photosynthetic electron transport under drought conditions. J. Exp. Bot. 56: 1269-1276 (2005).

Bartoli CG, Yu J, Gomez F, Fernandez L, McIntosh L, Foyer CH. Inter-relationships between light and respiration in the control of ascorbic acid synthesis and accumulation in Arabidopsis thaliana leaves. J. Exp. Bot. 57: 1621-1631 (2006).

Baurain D, Dinant M, Coosemans N, Matagne RF. Regulation of the alternative oxidase Aox1 gene in Chlamydomonas reinhardtii. Role of the nitrogen source on the expression of a reporter gene under the control of the Aox1 promoter. Plant Physiol. 131: 1418-1430 (2003).

Berthold DA, Stenmark P. Membrane-bound diiron carboxylate proteins. Annu. Rev. Plant Biol. 54: 497-517 (2003).

Borecky J, Nogueira FT, de Oliveira KA, Maia IG, Vercesi AE, Arruda P. The plant energy-dissipating mitochondrial systems: depicting the genomic structure and the expression profiles of the gene families of uncoupling protein and alternative oxidase in monocots and dicots. J. Exp. Bot. 57: 849-864 (2006).

Breidenbach RW, Saxton MJ, Hansen LD, Criddle RS. Heat generation and dissipation in plants: can the alternative oxidative phosphorylation pathway serve a thermoregulatory role in plant tissues other than specialized organs? Plant Physiol. 114: 1137-1140 (1997).

Bykova NV, Keerberg O, Parnik T, Bauwe H, Gardestrom P. Interaction between photorespiration and respiration in transgenic potato plants with antisense reduction in glycine decarboxylase. Planta 222: 130-140 (2005).

Camacho A, Moreno-Sanchez R, Bernal-Lugo I. Control of superoxide production in mitochondria from maize mesocotyls. FEBS Lett. 570: 52-56 (2004).

Carol P, Stevenson D, Bisanz C, Breitenbach J, Sandmann G, Mache R, Coupland G, Kuntz M. Mutations in the Arabidopsis gene IMMUTANS cause a variegated phenotype by inactivating a chloroplast terminal oxidase associated with phytoene desaturation. Plant Cell 11: 57-68 (1999).

Centeno DC, Oliver SN, Nunes-Nesi A, Geigenberger P, Machado DN, Loureiro ME, Silva MA, Fernie AR. Metabolic regulation of pathways of carbohydrate oxidation in potato (Solanum tuberosum) tubers. Physiol. Plant. 133: 744-754 (2008).

Chivasa S, Berry JO, ap Rees T, Carr JP. Changes in gene expression during development and thermogenesis in Arum. Aust. J. Plant Physiol. 26: 391-399 (1999).

Clifton R, Lister R, Parker KL, Sappl PG, Elhafez D, Millar AH, Day DA, Whelan J. Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana. Plant Mol. Biol. 58: 193-212 (2005).

Considine MJ, Daley DO, Whelan J. The expression of alternative oxidase and uncoupling protein during fruit ripening in mango. Plant Physiol. 126: 1619-1629 (2001).

Considine MJ, Holtzapffel RC, Day DA, Whelan J, Millar AH. Molecular distinction between alternative oxidase from monocots and dicots. Plant Physiol. 129: 949-953 (2002).

Crichton PG, Affourtit C, Albury MS, Carre JE, Moore AL. Constitutive activity of Sauromatum guttatum alternative oxidase in Schizosaccharomyces pombe implicates residues in addition to conserved cysteines in alpha-keto acid activation. FEBS Lett. 579: 331-336 (2005).

Cruz-Hernandez A, Gomez-Lim MA. Alternative oxidase from mango (Mangifera indica, L.) is differentially regulated during fruit ripening. Planta 197: 569-576 (1995).

Daley DO, Considine MJ, Howell KA, Millar AH, Day DA, Whelan J. Respiratory gene expression in soybean cotyledons during post-germinative development. Plant Mol. Biol. 51: 745-755 (2003).

Dessi P, Pavlov PF, Wallberg F, Rudhe C, Brack S, Whelan J, Glaser E. Investigations on the in vitro import ability of mitochondrial precursor proteins synthesized in wheat germ transcription-translation extract. Plant Mol. Biol. 52: 259-271 (2003).

Dixit V, Pandey V, Shyam R. Chromium ions inactivate electron transport and enhance superoxide generation in vivo in pea (Pisum sativum L. cv. Azad) root mitochondria. Plant Cell Environ. 25: 687-693 (2002).

Djajanegara I, Finnegan PM, Mathieu C, McCabe T, Whelan J, Day DA. Regulation of alternative oxidase gene expression in soybean. Plant Mol. Biol. 50: 735-742 (2002).

Dojcinovic D, Krosting J, Harris AJ, Wagner DJ, Rhoads DM. Identification of a region of the Arabidopsis AtAOX1a promoter necessary for mitochondrial retrograde regulation of expression. Plant Mol. Biol. 58: 159-175 (2005).

Duby F, Matagne RF. Alteration of dark respiration and reduction of phototrophic growth in a mitochondrial DNA deletion mutant of Chlamydomonas lacking cob, nd4, and the 3' end of nd5. Plant Cell 11: 115-126 (1999).

Dutilleul C, Garmier M, Noctor G, Mathieu C, Chetrit P, Foyer CH, de Paepe R. Leaf mitochondria modulate whole cell redox homeostasis, set antioxidant capacity, and determine stress resistance through altered signaling and diurnal regulation. Plant Cell 15: 1212-1226 (2003).

Ederli L, Morettini R, Borgogni A, Wasternack C, Miersch O, Reale L, Ferranti F, Tosti N, Pasqualini S. Interaction between nitric oxide and ethylene in the induction of alternative oxidase in ozone-treated tobacco plants. Plant Physiol. 142: 595-608 (2006).

Escobar MA, Franklin KA, Svensson AS, Salter MG, Whitelam GC, Rasmusson AG. Lght regulation of the Arabidopsis respiratory chain. Multiple discrete photoreceptor responses contribute to induction of type II NAD(P)H dehydrogenase genes. Plant Physiol. 136: 2710-2721 (2004).

Escobar MA, Geisler DA, Rasmusson AG. Reorganization of the alternative pathways of the Arabidopsis respiratory chain by nitrogen supply: opposing effects of ammonium and nitrate. Plant J. 45: 775-788 (2006).

Eubel H, Jansch L, Braun HP. New insights into the respiratory chain of plant mitochondria. Supercomplexes and a unique composition of complex II. Plant Physiol. 133: 274-286 (2003).

Finnegan PM, Whelan J, Millar AH, Zhang Q, Smith MK, Wiskich JT, Day DA. Differential expression of the multigene family encoding the soybean mitochondrial alternative oxidase. Plant Physiol. 114: 455-466 (1997).

Fiorani F, Umbach AL, Siedow JN. The alternative oxidase of plant mitochondria is involved in the acclimation of shoot growth at low temperature. A study of Arabidopsis AOX1a transgenic plants. Plant Physiol. 139: 1795-1805 (2005).

Fujii S, Komatsu S, Toriyama K. Retrograde regulation of nuclear gene expression in CW-CMS of rice. Plant Mol. Biol. 63: 405-417 (2007).

Fujii S, Toriyama K. DCW11, down-regulated gene 11 in CW-type cytoplasmic male sterile rice, encoding mitochondrial protein phosphatase 2c is related to cytoplasmic male sterility. Plant Cell Physiol. 49: 633-640 (2008).

Gaston S, Ribas-Carbo M, Busquets S, Berry JA, Zabalza A, Royuela M. Changes in mitochondrial electron partitioning in response to herbicides inhibiting branched-chain amino acid biosynthesis in soybean. Plant Physiol. 133: 1351-1359 (2003).

Gelhaye E, Rouhier N, Gerard J, Jolivet Y, Gualberto J, Navrot N, Ohlsson PI, Wingsle G, Hirasawa M, Knaff DB, Wang H, Dizengremel P, Meyer Y, Jacquot JP. A specific form of thioredoxin h occurs in plant mitochondria and regulates the alternative oxidase. Proc. Natl. Acad. Sci. U.S.A. 101: 14545–14550 (2004).

Gilliland A, Singh DP, Hayward JM, Moore CA, Murphy AM, York CJ, Slator J, Carr JP. Genetic modification of alternative respiration has differential effects on antimycin A-induced versus salicylic acid-induced resistance to tobacco mosaic virus. Plant Physiol. 132: 1518-1528 (2003).

Gonzalez-Meler MA, Giles L, Thomas RB, Siedow JN. Metabolic regulation of leaf respiration and alternative pathway activity in response to phosphate supply. Plant Cell Environ. 24: 205-215 (2001).

Gonzalez-Meler MA, Ribas-Carbo M, Giles L, Siedow JN. The effect of growth and measurement temperature on the activity of the alternative respiratory pathway. Plant Physiol. 120: 765-772 (1999).

Grant N, Onda Y, Kakizaki Y, Ito K, Watling J, Robinson S. Two cys or not two cys? That is the question; alternative oxidase in the thermogenic plant sacred Lotus. Plant Physiol. 150: 987-995 (2009).

Grant NM, Miller RE, Watling JR, Robinson SA. Synchronicity of thermogenic activity, alternative pathway respiratory flux, AOX protein content, and carbohydrates in receptacle tissues of sacred lotus during floral development. J. Exp. Bot. 59: 705-714 (2008).

Guo S, Schinner K, Sattelmacher B, Hansen UP. Different apparent CO2 compensation points in nitrate- and ammonium-grown Phaseolus vulgaris and the relationship to non-photorespiratory CO2 evolution. Physiol. Plant. 123: 288-301 (2005).

Guy RD, Vanlerberghe GC. Partitioning of respiratory electrons in the dark in leaves of transgenic tobacco with modified levels of alternative oxidase. Physiol. Plant. 125: 171-180 (2005).

Hanikenne M, Motte P, Wu MCS, Wang T, Loppes R, Matagne RF. A mitochondrial half-size ABC transporter is involved in cadmium tolerance in Chlamydomonas reinhardtii. Plant Cell Environ. 28: 863-873 (2005).

Hilal M, Castagnaro A, Moreno H, Massa EM. Specific localization of the respiratory alternative oxidase in meristematic and xylematic tissues from developing soybean roots and hypocotyls. Plant Physiol. 115: 1499-1503 (1997).

Hilal M, Zenoff AM, Ponessa G, Moreno H, Massa EM. Saline stress alters the temporal patterns of xylem differentiation and alternative oxidase expression in developing soybean roots. Plant Physiol. 117: 695-701 (1998).

Hiser C, Kapranov P, McIntosh L. Genetic modification of respiratory capacity in potato. Plant Physiol. 110: 277-286 (1996).

Ho LH, Giraud E, Lister R, Thirkettle-Watts D, Low J, Clifton R, Howell KA, Carrie C, Donald T, Whelan J. Characterization of the regulatory and expression context of an alternative oxidase gene provides insights into cyanide-insensitive respiration during growth and development. Plant Physiol. 143: 1519-1533 (2007).

Ho LH, Giraud E, Uggalla V, Lister R, Clifton R, Glen A, Thirkettle-Watts D, Van Aken O, Whelan J. Identification of regulatory pathways controlling gene expression of stress responsive mitochondrial proteins in Arabidopsis. Plant Physiol. 147: 1858-1873 (2008).

Huang X, Von Rad U, Durner J. Nitric oxide induces transcriptional activation of the nitric oxide-tolerant alternative oxidase in Arabidopsis suspension cells. Planta 215: 914-923 (2002).

Igamberdiev AU, Bykova NV, Gardestrom P. Involvement of cyanide-resistant and rotenone-insensitive pathways of mitochondrial electron transport during oxidation of glycine in higher plants. FEBS Lett. 412: 265-269 (1997).

Igamberdiev AU, Bykova NV, Lea PJ, Gardestrom P. The role of photorespiration in redox and energy balance of photosynthetic plant cells: A study with a barley mutant deficient in glycine decarboxylase. Physiol. Plant. 111: 427-438 (2001).

Igamberdiev AU, Hill RD. Plant mitochondrial function during anaerobiosis. Ann. Bot. (Lond.) 103: 259-268 (2009).

Ito K, Onda Y, Sato T, Abe Y, Uemura M. Structural requirements for the perception of ambient temperature signals in homeothermic heat production of skunk cabbage (Symlocarpus foetidus). Plant Cell Environ. 26: 783-788 (2003).

Josse EM, Simkin AJ, Gaffe J, Laboure AM, Kuntz M, Carol P. A plastid terminal oxidase associated with carotenoid desaturation during chromoplast differentiation. Plant Physiol. 123: 1427-1436 (2000).

Juszczuk IM, Flexas J, Szal B, Dabrowska Z, Ribas-Carbo M, Rychter AM. Effect of mitochondrial genome rearrangement on respiratory activity, photosynthesis, photorespiration and energy status of MSC16 cucumber (Cucumis sativus) mutant. Physiol. Plant. 131: 527-541 (2007).

Karpova OV, Kuzmin EV, Elthon TE, Newton KJ. Differential expression of alternative oxidase genes in maize mitochondrial mutants. Plant Cell 14: 3271-3284 (2002).

Kolesnichenko AV, Grabelnych OI, Pobezhimova TP, Voinikov VK. Non-phosphorylating bypass of the plant mitochondrial respiratory chain by stress protein CSP 310. Planta 221: 113-122 (2005).

Kolesnichenko AV, Pobezhimova TP, Grabelnych OI, Voinikov VK. Stress-induced protein CSP 310: a third uncoupling system in plants. Planta 215: 279-286 (2002).

Krab K. Kinetic and regulatory aspects of the function of the alternative oxidase in plant respiration. J. Bioenerg. Biomembr. 27: 387-396 (1995).

Krause M, Durner J. Harpin inactivates mitochondria in Arabidopsis suspension cells. Mol. Plant-Microbe Interact. 17: 131-139 (2004).

Kumar AM, Soll D. Arabidopsis alternative oxidase sustains Escherichia coli respiration. Proc. Natl. Acad. Sci. U.S.A. 89: 10842-10846 (1992).

Lee MN, Whelan J. Identification of signals required for import of the soybean F(A)d subunit of ATP synthase into mitochondria. Plant Mol. Biol. 54: 193-203 (2004).

Lennon AM, Prommeenate P, Nixon PJ. Location, expression and orientation of the putative chlororespiratory enzymes, Ndh and IMMUTANS, in higher-plant plastids. Planta 218: 254-260 (2003).

Lewis CE, Noctor G, Causton D, Foyer CH. Regulation of assimilate partitioning in leaves. Aust. J. Plant Physiol. 27: 507-519 (2000).

Liu YJ, Norberg FE, Szilágyi A, De Paepe R, Akerlund HE, Rasmusson AG. The mitochondrial external NADPH dehydrogenase modulates the leaf NADPH/NADP+ ratio in transgenic Nicotiana sylvestris. Plant Cell Physiol. 49: 251-263 (2008).

Lopez-Millan AF, Morales F, Gogorcena Y, Abadia A, Abadia J. Iron resupply-mediated deactivation of Fe-deficiency stress responses in roots of sugar beet. Aust. J. Plant Physiol. 28: 171-180 (2001).

Macfarlane C, Hansen LD, Florez-Sarasa I, Ribas-Carbo M. Plant mitochondria electron partitioning is independent of short-term temperature changes. Plant Cell Environ. 32: 585-591 (2009).

Manabe Y, Tinker N, Colville A, Miki B. CSR1, the sole target of imidazolinone herbicide in Arabidopsis thaliana. Plant Cell Physiol. 48: 1340-1358 (2007).

Manzano D, Fernandez-Busquets X, Schaller H, Gonzalez V, Boronat A, Arro M, Ferrer A. The metabolic imbalance underlying lesion formation in Arabidopsis thaliana overexpressing farnesyl diphosphate synthase (isoform 1S) leads to oxidative stress and is triggered by the developmental decline of endogenous HMGR activity. Planta 219: 982-992 (2004).

Martí MC, Olmos E, Calvete JJ, Diaz I, Barranco-Medina S, Whelan J, Lazaro JJ, Sevilla F, Jimenez A. Mitochondrial and nuclear localization of a novel pea thioredoxin: identification of its mitochondrial target proteins. Plant Physiol. 150: 646-657 (2009).

Maxwell DP, Wang Y, McIntosh L. The alternative oxidase lowers mitochondrial reactive oxygen production in plant cells. Proc. Natl. Acad. Sci. U.S.A. 96: 8271-8276 (1999).

McCabe TC, Finnegan PM, Harvey Millar A, Day DA, Whelan J. Differential expression of alternative oxidase genes in soybean cotyledons during postgerminative development. Plant Physiol. 118: 675-682 (1998).

McDonald AE, Amirsadeghi S, Vanlerberghe GC. Prokaryotic orthologues of mitochondrial alternative oxidase and plastid terminal oxidase. Plant Mol. Biol. 53: 865-876 (2003).

McDonald AE, Amirsadeghi S, Vanlerberghe GC. Prokaryotic orthologues of mitochondrial alternative oxidase and plastid terminal oxidase. Plant Mol.Biol. 53: 865-876 (2003).

McIntosh L. Molecular biology of the alternative oxidase. Plant Physiol. 105: 781-786 (1994).

Michalecka AM, Agius SC, Moller IM, Rasmusson AG. Identification of a mitochondrial external NADPH dehydrogenase by overexpression in transgenic Nicotiana sylvestris. Plant J. 37: 415-425 (2004).

Millar AH, Atkin OK, Ian Menz R, Henry B, Farquhar G, Day DA. Analysis of respiratory chain regulation in roots of soybean seedlings. Plant Physiol. 117: 1083-1093 (1998).

Millenaar FF, Benschop JJ, Wagner AM, Lambers H. The role of the alternative oxidase in stabilizing the in vivo reduction state of the ubiquinone pool and the activation state of the alternative oxidase. Plant Physiol. 118: 599-607 (1998).

Millenaar FF, Gonzalez-Meler MA, Fiorani F, Welschen R, Ribas-Carbo M, Siedow JN, Wagner AM, Lambers H. Regulation of alternative oxidase activity in six wild monocotyledonous species. An in vivo study at the whole root level. Plant Physiol. 126: 376-387 (2001).

Millenaar FF, Gonzalez-Meler MA, Siedow JN, Wagner AM, Lambers H. Role of sugars and organic acids in regulating the concentration and activity of the alternative oxidase in Poa annua roots. J. Exp. Bot. 53: 1081-1088 (2002).

Mizuno M, Tada Y, Uchii K, Kawakami S, Mayama S. Catalase and alternative oxidase cooperatively regulate programmed cell death induced by beta-glucan elicitor in potato suspension cultures. Planta 220: 849-853 (2005).

Moller IM. Plant mitochondra and oxidative stress: electron transport, NADPH turnover, and metabolism of reactive oxygen species. Annu. Rev. Plant Physiol. Plant Mol. Biol. 52: 561-591 (2001).

Moller IM, Kristensen BK. Protein oxidation in plant mitochondria as a stress indicator. Photochem. Photobiol. Sci. 3: 730-735 (2004).

Munro KD, Hodges DM, DeLong JM, Forney CF, Kristie DN. Low temperature effects on ubiquinone content, respiration rates and lipid peroxidation levels of etiolated seedlings of two differentially chilling-sensitive species. Physiol. Plant. 121: 488-497 (2004).

Murphy AM, Chivasa S, Singh DP, Carr JP. Salicylic acid-induced resistance to viruses and other pathogens: a parting of the ways? Trends Plant Sci. 4: 155-160 (1999).

Nagel OW, Waldron S, Jones HG. An off-line implementation of the stable isotope technique for measurements of alternative respiratory pathway activities. Plant Physiol. 127: 1279-1286 (2001).

Netting AG. pH, abscisic acid and the integration of metabolism in plants under stressed and non-stressed conditions. II. Modifications in modes of metabolism induced by variation in the tension on the water column and by stress. J. Exp. Bot. 53: 151-173 (2002).

Nihei C, Fukai Y, Kawai K, Osanai A, Yabu Y, Suzuki T, Ohta N, Minagawa N, Nagai K, Kita K. Purification of active recombinant trypanosome alternative oxidase. FEBS Lett. 538: 35-40 (2003).

Noguchi K, Go CS, Miyazawa SI, Terashima I, Ueda S, Yoshinari T. Costs of protein turnover and carbohydrate export in leaves of sun and shade species. Aust. J. Plant Physiol. 28: 37-47 (2001).

Noguchi K, Go CS, Terashima I, Ueda S, Yoshinari T. Activities of the cyanide-resistant respiratory pathway in leaves of sun and shade species. Aust. J. Plant Physiol. 28: 27-35 (2001).

Noguchi K, Taylor NL, Millar AH, Lambers H, Day DA. Response of mitochondria to light intensity in the leaves of sun and shade species. Plant Cell Environ. 28: 760-771 (2005).

Ordog SH, Higgins VJ, Vanlerberghe GC. Mitochondrial alternative oxidase is not a critical component of plant viral resistance but may play a role in the hypersensitive response. Plant Physiol. 129: 1858-1865 (2002).

Ottow EA, Brinker M, Teichmann T, Fritz E, Kaiser W, Brosche M, Kangasjarvi J, Jiang X, Polle A. Populus euphratica displays apoplastic sodium accumulation, osmotic adjustment by decreases in calcium and soluble carbohydrates, and develops leaf succulence under salt stress. Plant Physiol. 139: 1762-1772 (2005).

Parsons HL, Yip JY, Vanlerberghe GC. Increased respiratory restriction during phosphate-limited growth in transgenic tobacco cells lacking alternative oxidase. Plant Physiol. 121: 1309-1320 (1999).

Pastore D, Trono D, Laus MN, Di Fonzo N, Flagella Z. Possible plant mitochondria involvement in cell adaptation to drought stress. A case study: durum wheat mitochondria. J. Exp. Bot. 58: 195-210 (2007).

Pastore D, Trono D, Laus MN, Di Fonzo N, Passarella S. Alternative oxidase in durum wheat mitochondria. Activation by pyruvate, hydroxypyruvate and glyoxylate and physiological role. Plant Cell Physiol. 42: 1373-1382 (2001).

Peltier G, Cournac L. Chlororespiration. Annu. Rev. Plant Biol. 53: 523-550 (2002).

Rasmusson AG, Soole KL, Elthon TE. Alternative NAD(P)H dehydrogenases of plant mitochondria. Annu. Rev. Plant Biol. 55: 23-39 (2004).

Rhoads DM, McIntosh L. Cytochrome and alternative pathway respiration in tobacco. Effects of salicylic acid. Plant Physiol. 103: 877-883 (1993).

Rhoads DM, McIntosh L. Salicylic acid regulation of respiration in higher plants: alternative oxidase expression. Plant Cell 4: 1131-1139 (1992).

Rhoads DM, White SJ, Zhou Y, Muralidharan M, Elthon TE. Altered gene expression in plants with constitutive expression of a mitochondrial small heat shock protein suggests the involvement of retrograde regulation in the heat stress response. Physiol. Plant. 123: 435-444 (2005).

Ribas-Carbo M, Robinson SA, Gonzalez-Meler MA, Lennon AM, Giles L, Siedow JN, Berry JA. Effects of light on respiration and oxygen isotope fractionation in soybean cotyledons. Plant Cell Environ. 23: 983-989 (2000).

Rizhsky L, Hallak-Herr E, Van Breusegem F, Rachmilevitch S, Barr JE, Rodermel S, Inze D, Mittler R. Double antisense plants lacking ascorbate peroxidase and catalase are less sensitive to oxidative stress than single antisense plants lacking ascorbate peroxidase or catalase. Plant J. 32: 329-342 (2002).

Rizhsky L, Liang H, Mittler R. The combined effect of drought stress and heat shock on gene expression in tobacco. Plant Physiol. 130: 1143-1151 (2002).

Robson CA, Vanlerberghe GC. Transgenic plant cells lacking mitochondrial alternative oxidase have increased susceptibility to mitochondria-dependent and -independent pathways of programmed cell death. Plant Physiol. 129: 1908-1920 (2002).

Rosso D, Ivanov AG, Fu A, Geisler-Lee J, Hendrickson L, Geisler M, Stewart G, Krol M, Hurry V, Rodermel SR, Maxwell DP, Huner NP. IMMUTANS does not act as a stress-induced safety valve in the protection of the photosynthetic apparatus of Arabidopsis during steady-state photosynthesis. Plant Physiol. 142: 574-585 (2006).

Saisho D, Nambara E, Naito S, Tsutsumi N, Hirai A, Nakazono M. Characterization of the gene family for alternative oxidase from Arabidopsis thaliana. Plant Mol. Biol. 35: 585-596 (1997).

Seymour RS. Dynamics and precision of thermoregulatory responses of eastern skunk cabbage Symplocarpus foetidus. Plant Cell Environ. 27: 1014-1022 (2004).

Shane MW, Cramer MD, Funayama-Noguchi S, Cawthray GR, Millar AH, Day DA, Lambers H. Developmental physiology of cluster-root carboxylate synthesis and exudation in Harsh hakea. Expression of phosphoenolpyruvate carboxylase and the alternative oxidase. Plant Physiol. 135: 549-560 (2004).

Shen W, Wei Y, Dauk M, Tan Y, Taylor DC, Selvaraj G, Zou J. Involvement of a glycerol-3-phosphate dehydrogenase in modulating the NADH/NAD+ ratio provides evidence of a mitochondrial glycerol-3-phosphate shuttle in Arabidopsis. Plant Cell 18: 422-441 (2006).

Sieger SM, Kristensen BK, Robson CA, Amirsadeghi S, Eng EW, Abdel-Mesih A, Moller IM, Vanlerberghe GC. The role of alternative oxidase in modulating carbon use efficiency and growth during macronutrient stress in tobacco cells. J. Exp. Bot. 56: 1499-1515 (2005).

Sigyarto C, Hugosson M, Moberg P, Andreu D, Glaser E. L and D presequence peptides derived from the precursor of F1beta subunit of the ATP synthase inhibit mitochondrial protein import by interaction with import machinery. Plant Mol. Biol. 47: 815-826 (2001).

Simons BH, Millenaar FF, Mulder L, Van Loon LC, Lambers H. Enhanced expression and activation of the alternative oxidase during infection of Arabidopsis with Pseudomonas syringae pv tomato. Plant Physiol. 120: 529-538 (1999).

Stepien P, Johnson GN. Contrasting responses of photosynthesis to salt stress in the glycophyte Arabidopsis and the halophyte thellungiella: role of the plastid terminal oxidase as an alternative electron sink. Plant Physiol. 149: 1154-1165 (2009).

Svensson AS AS, Rasmusson AG. Light-dependent gene expression for proteins in the respiratory chain of potato leaves. Plant J. 28: 73-82 (2001).

Sweetlove LJ, Heazlewood JL, Herald V, Holtzapffel R, Day DA, Leaver CJ, Millar AH. The impact of oxidative stress on Arabidopsis mitochondria. Plant J. 32: 891-904 (2002).

Szigyarto C, Dessi P, Smith MK, Knorpp C, Harmey MA, Day DA, Glaser E, Whelan J. A matrix-located processing peptidase of plant mitochondria. Plant Mol. Biol. 36: 171-181 (1998).

Takahashi Y, Berberich T, Miyazaki A, Seo S, Ohashi Y, Kusano T. Spermine signalling in tobacco: activation of mitogen-activated protein kinases by spermine is mediated through mitochondrial dysfunction. Plant J. 36: 820-829 (2003).

Tanudji M, Dessi P, Murcha M, Whelan J. Protein import into plant mitochondria: precursor proteins differ in ATP and membrane potential requirements. Plant Mol. Biol. 45: 317-325 (2001).

Taylor NJ, Cowan AK. Xanthine dehydrogenase and aldehyde oxidase impact plant hormone homeostasis and affect fruit size in 'Hass' avocado. J. Plant Res. 117: 121-130 (2004).

Thirkettle-Watts D, McCabe TC, Clifton R, Moore C, Finnegan PM, Day DA, Whelan J. Analysis of the alternative oxidase promoters from soybean. Plant Physiol. 133: 1158-1169 (2003).

Thompson P, Bowsher CG, Tobin AK. Heterogeneity of mitochondrial protein biogenesis during primary leaf development in barley. Plant Physiol. 118: 1089-1099 (1998).

Tischner R, Planchet E, Kaiser WM. Mitochondrial electron transport as a source for nitric oxide in the unicellular green alga Chlorella sorokiniana. FEBS Lett. 576: 151-155 (2004).

Trono D, Flagella Z, Laus MN, Di Fonzo N, Pastore D. The uncoupling protein and the potassium channel are activated by hyperosmotic stress in mitochondria from durum wheat seedlings. Plant Cell Environ. 27: 437-448 (2004).

Umbach AL, Fiorani F, Siedow JN. Characterization of transformed Arabidopsis with altered alternative oxidase levels and analysis of effects on reactive oxygen species in tissue. Plant Physiol. 139: 1806-1820 (2005).

Umbach AL, Siedow JN. Covalent and noncovalent dimers of the cyanide-resistant alternative oxidase protein in higher plant mitochondria and their relationship to enzyme activity. Plant Physiol. 103: 845-854 (1993).

Van Lis R, Atteia A, Mendoza-Hernandez G, Gonzalez-Halphen D. Identification of novel mitochondrial protein components of Chlamydomonas reinhardtii. A proteomic approach. Plant Physiol. 132: 318-330 (2003).

Vanlerberghe GC, McIntosh L. Alternative oxidase: from gene to function. Annu. Rev. Plant Physiol. Plant Mol. Biol. 48: 703-734 (1997).

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David Rhodes
Department of Horticulture & Landscape Architecture
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Last Update: 10/01/09