|
HORT640 - Metabolic Plant Physiology
References, C4
Achard P, Lagrange T, El-Zanaty AF, Mache R 2003 Architecture and transcriptional activity of the initiator element of the TATA-less RPL21 gene. Plant J. 35: 743-752.
Achnine L, Blancaflor EB, Rasmussen S, Dixon RA 2004 Colocalization of L-phenylalanine ammonia-lyase and cinnamate 4-hydroxylase for metabolic channeling in phenylpropanoid biosynthesis. Plant Cell 16: 3098-3109.
Adhikari U, Mateu CG, Chattopadhyay K, Pujol CA, Damonte EB, Ray B 2006 Structure and antiviral activity of sulfated fucans from Stoechospermum marginatum. Phytochemistry 67: 2474-2482.
Agarie S, Kai M, Takatsuji H, Ueno O 1997 Expression of C3 and C4 photosynthetic characteristics in the amphibious plant Eleocharis vivipara: structure and analysis of the expression of isogenes for pyruvate, orthophosphate dikinase. Plant Mol. Biol. 34: 363-369.
Agostino A, Furbank RT, Hatch MD 1989 Maximising photosynthetic activity and cell integrity in isolated bundle sheath cell strands from C4 species. Aust. J. Plant Physiol. 16: 279-290.
Agostino A, Hatch MD 1993 A procedure for the purification of thioredoxin-m from leaves of the C4 plant Zea mays. Protein Expr. Purif. 4: 434-437.
Agostino A, Heldt HW, Hatch MD 1996 Mitochondrial respiration in relation to photosynthetic C4 acid decarboxylation in C4 species. Aust. J. Plant Physiol. 23: 1-7.
Agostino A, Jeffrey P, Hatch MD 1992 Amino acid sequence and molecular weight of native NADP malate dehydrogenase from the C4 plant Zea mays. Plant Physiol. 98: 1506-1510.
Aguera E, Ruano D, Cabello P, de la Haba P 2006 Impact of atmospheric CO(2) on growth, photosynthesis and nitrogen metabolism in cucumber (Cucumis sativus L.) plants. J. Plant Physiol. 163: 809-817.
Aguilar-Martinez JA, Poza-Carrion C, Cubas P 2007 Arabidopsis BRANCHED1 acts as an integrator of branching signals within axillary buds. Plant Cell 19: 458-472.
Ahmed B, Al-Howiriny TA, Mossa JS 2006 Crotalic and emarginellic acids: two triterpenes from Crotalaria emarginella and anti-inflammatory and anti-hepatotoxic activity of crotalic acid. Phytochemistry 67: 956-964.
Akhkha A, Reid I, Clarke DD, Dominy P 2001 Photosynthetic light response curves determined with the leaf oxygen electrode: minimisation of errors and significance of the convexity term. Planta 214: 135-141.
Albers D, Schaefer M, Scheu S 2006 Incorporation of plant carbon into the soil animal food web of an arable system. Ecology 87: 235-245.
Ali R, Zielinski RE, Berkowitz GA 2006 Expression of plant cyclic nucleotide-gated cation channels in yeast. J. Exp. Bot. 57: 125-138.
Ali S, Taylor WC 2001 The 3' non-coding region of a C4 photosynthesis gene increases transgene expression when combined with heterologous promoters. Plant Mol. Biol. 46: 325-333.
Alper SL 2006 Molecular physiology of SLC4 anion exchangers. Exp. Physiol. 91: 153-161.
Aluru MR, Yu F, Fu A, Rodermel S 2006 Arabidopsis variegation mutants: new insights into chloroplast biogenesis. J. Exp. Bot. 57: 1871-1881.
Alvarez R, Garcia-Maurino S, Feria AB, Vidal J, Echevarria C 2003 A conserved 19-amino acid synthetic peptide from the carboxy terminus of phosphoenolpyruvate carboxylase inhibits the in vitro phosphorylation of the enzyme by the calcium-independent phosphoenolpyruvate carboxylase kinase. Plant Physiol. 132: 1097-1106.
Annen F, Stockhaus J 1998 Characterization of a Sorghum bicolor gene family encoding putative protein kinases with a high similarity to the yeast SNF1 protein kinase. Plant Mol. Biol. 36: 529-539.
Annen F, Stockhaus J 1999 SbRLK1, a receptor-like protein kinase of Sorghum bicolor (L.) Moench that is expressed in mesophyll cells. Planta 208: 420-425.
Anterola AM, Lewis NG 2002 Trends in lignin modification: a comprehensive analysis of the effects of genetic manipulations/mutations on lignification and vascular integrity. Phytochemistry 61: 221-294.
Arfaoui A, El Hadrami A, Mabrouk Y, Sifi B, Boudabous A, El Hadrami I, Daayf F, Cherif M 2007 Treatment of chickpea with Rhizobium isolates enhances the expression of phenylpropanoid defense-related genes in response to infection by Fusarium oxysporum f. sp. ciceris. Plant Physiol. Biochem. 45: 470-479.
Arga KY, Onsan ZI, Kirdar B, Ulgen KO, Nielsen J 2007 Understanding signaling in yeast: Insights from network analysis. Biotechnol. Bioeng. 97: 1246-1258.
Arigoni D, Sagner S, Latzel C, Eisenreich W, Bacher A, Zenk MH 1997 Terpenoid biosynthesis from 1-deoxy-D-xylulose in higher plants by intramolecular skeletal rearrangement. Proc. Natl. Acad. Sci. U.S.A. 94: 10600-10605.
Armstrong AF, Logan DC, Tobin AK, O'Toole P, Atkin OK 2006 Heterogeneity of plant mitochondrial responses underpinning respiratory acclimation to the cold in Arabidopsis thaliana leaves. Plant Cell Environ. 29: 940-949.
Arriodupont M, Bakrim N, Echevarria C, Gadal P, Lemarechal P, Vidal J 1992 Compared properties of phosphoenolpyruvate carboxylase from dark-adapted and light-adapted Sorghum leaves. Use of a rapid purification technique by innumochromatography. Plant Sci. 81: 37-46.
Ashton AR, Burnell JN, Hatch MD 1984 Regulation of C4 photosynthesis: inactivation of pyruvate, Pi-dikinase by ADP-dependent phosphorylation and activation by phosphorolysis. Arch. Biochem. Biophys. 230: 492-503.
Ashton AR, Hatch MD 1983 Regulation of C4 photosynthesis: regulation of activation and inactivation of NADP-malate dehydrogenase by NADP and NADPH. Arch. Biochem. Biophys. 227: 416-424.
Ashton AR, Hatch MD 1983 Regulation of C4 photosynthesis: regulation of pyruvate, Pi-dikinase by ADP-dependent phosphorylation and dephosphorylation. Biochem. Biophys. Res. Commun. 115: 53-60.
Ashton AR, Hatch MD 1983 Regulation of C4 photosynthesis: physical and kinetic- properties of active (dithiol) and inactive (disulfide) NADP-malate dehydrogenase from Zea mays. Arch. Biochem. Biophys. 227: 406-415.
Ashton AR, Trevanion SJ, Carr PD, Verger D, Ollis DL 2000 Structural basis for the light regulation of chloroplast NADP malate dehydrogenase. Physiol. Plant. 110: 314-321.
Atanassova R, Flenet M, Gigot C, Chaubet N 1998 Functional analysis of the promoter region of a maize (Zea mays L.) H3 histone gene in transgenic Arabidopsis thaliana. Plant Mol. Biol. 37: 275-285.
Audran C, Borel C, Frey A, Sotta B, Meyer C, Simonneau T, Marion-Poll A 1998 Expression studies of the zeaxanthin epoxidase gene in Nicotiana plumbaginifolia. Plant Physiol. 118: 1021-1028.
Ayliffe MA, Pallotta M, Langridge P, Pryor AJ 2007 A barley activation tagging system. Plant Mol. Biol. 64: 329-347.
Azuma H, Toyota M, Asakawa Y, Takaso T, Tobe H 2002 Floral scent chemistry of mangrove plants. J. Plant Res. 115: 47-53.
Bailey KJ, Battistelli A, Dever LV, Lea PJ, Leegood RC 2000 Control of C4 photosynthesis: effects of reduced activities of phosphoenolpyruvate carboxylase on CO2 assimilation in Amaranthus edulis L. J. Exp. Bot. 51: 339-346.
Bailey KJ, Gray JE, Walker RP, Leegood RC 2007 Coordinate regulation of phosphoenolpyruvate carboxylase and phosphoenolpyruvate carboxykinase by light and CO2 during C4 photosynthesis. Plant Physiol. 144: 479-486.
Baker PJ, Waugh ML, Wang XG, Stillman TJ, Turnbull AP, Engel PC, Rice DW 1997 Determinants of substrate specificity in the superfamily of amino acid dehydrogenases. Biochemistry 36: 16109-16115.
Bakrim N, Brulfert J, Vidal J, Chollet R 2001 Phosphoenolpyruvate carboxylase kinase is controlled by a similar signaling cascade in CAM and C4 plants. Biochem. Biophys. Res. Commun. 286: 1158-1162.
Bakrim N, Echevarria C, Cretin C, Arriodupont M, Pierre JN, Vidal J, Chollet R, Gadal P 1992 Regulatory phosphorylation of Sorghum leaf phosphenolpyruvate carboxylase. Identification of the protein-serine kinase and some elements of the signal-transduction cascade. Eur. J. Biochem. 204: 821-830.
Bakrim N, Nhiri M, Pierre JN, Vidal J 1998 Metabolite control of Sorghum C4 phosphoenolpyruvate carboxylase catalytic activity and phosphorylation state. Photosynth. Res. 58: 153-162.
Bakrim N, Prioul JL, Deleens E, Rocher JP, Arrio-Dupont M, Vidal J, Gadal P, Chollet R 1993 Regulatory phosphorylation of C4 phosphoenolpyruvate carboxylase. A cardinal event influencing the photosynthesis rate in sorghum and maize. Plant Physiol. 101: 891-897.
Balague C, Lin B, Alcon C, Flottes G, Malmstrom S, Kohler C, Neuhaus G, Pelletier G, Gaymard F, Roby D 2003 HLM1, an essential signaling component in the hypersensitive response, is a member of the cyclic nucleotide-gated channel ion channel family. Plant Cell 15: 365-379.
Baldy P 1993 Corn phosphoglycolate phosphatase: immunodetection in Kranz cells. J. Plant Physiol. 141: 633-635.
Bao X, Pollard M, Ohlrogge J 1998 The biosynthesis of erucic acid in developing embryos of Brassica rapa. Plant Physiol. 118: 183-190.
Bartley GE, Ishida BK 2007 Ethylene-sensitive and insensitive regulation of transcription factor expression during in vitro tomato sepal ripening. J. Exp. Bot. 58: 2043-2051.
Basra AS, Dhawan AK, Goyal SS 2002 DCMU inhibits in vivo nitrate reduction in illuminated barley (C3) leaves but not in maize (C4): A new mechanism for the role of light? Planta 215: 855-861.
Batlla D, Nicoletta M, Benech-Arnold R 2007 Sensitivity of Polygonum aviculare seeds to light as affected by soil moisture conditions. Ann. Bot. (Lond.) 99: 915-924.
Baud S, Mendoza MS, To A, Harscoet E, Lepiniec L, Dubreucq B 2007 WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis. Plant J. 50: 825-838.
Bauwe H, Kolukisaoglu U 2003 Genetic manipulation of glycine decarboxylation. J. Exp. Bot. 54: 1523-1535.
Bazire A, Dheilly A, Diab F, Morin D, Jebbar M, Haras D, Dufour A 2005 Osmotic stress and phosphate limitation alter production of cell-to-cell signal molecules and rhamnolipid biosurfactant by Pseudomonas aeruginosa. FEMS Microbiol. Lett. 253: 125-131.
Becker TW, Carrayol E, Hirel B 2000 Glutamine synthetase and glutamate dehydrogenase isoforms in maize leaves: localization, relative proportion and their role in ammonium assimilation or nitrogen transport. Planta 211: 800-806.
Begna SH, Dwyer LM, Cloutier D, Assemat L, DiTommaso A, Zhou X, Prithiviraj B, Smith DL 2002 Decoupling of light intensity effects on the growth and development of C3 and C4 weed species through sucrose supplementation. J. Exp. Bot. 53: 1935-1940.
Bell-Lelong DA, Cusumano JC, Meyer K, Chapple C 1997 Cinnamate-4-hydroxylase expression in Arabidopsis. Regulation in response to development and the environment. Plant Physiol. 113: 729-738.
Bennetzen JL 2007 Patterns in grass genome evolution. Curr. Opin. Plant Biol. 10: 176-181.
Bergantino E, Sandona D, Cugini D, Bassi R 1998 The photosystem II subunit CP29 can be phosphorylated in both C3 and C4 plants as suggested by sequence analysis. Plant Mol. Biol. 36: 11-22.
Bernacchi CJ, Portis AR, Nakano H, Von Caemmerer S, Long SP 2002 Temperature response of mesophyll conductance. Implications for the determination of Rubisco enzyme kinetics and for limitations to photosynthesis in vivo. Plant Physiol. 130: 1992-1998.
Betz C, McCollum TG, Mayer RT 2001 Differential expression of two cinnamate 4-hydroxylase genes in 'Valencia' orange (Citrus sinensis Osbeck). Plant Mol. Biol. 46: 741-748.
Bi HH, Zeng RS, Su LM, An M, Luo SM 2007 Rice allelopathy induced by methyl jasmonate and methyl salicylate. J. Chem. Ecol. 33: 1089-1103.
Bird IF, Cornelius MJ, Keys AJ, Whittingham CP 1978 Intramolecular labelling of sucrose made by leaves from [14C)carbon dioxide or [3-14C]serine. Biochem. J. 172: 23-27.
Blankenship JE, Kindle KL 1992 Expression of chimeric genes by the light-regulated cabII-1 promoter in Chlamydomonas reinhardtii: a cabII-1/nit1 gene functions as a dominant selectable marker in a nit1- nit2- strain. Mol. Cell Biol. 12: 5268-5279.
Blasco F, Iobbi C, Ratouchniak J, Bonnefoy V, Chippaux M 1990 Nitrate reductases of Escherichia coli: sequence of the second nitrate reductase and comparison with that encoded by the narGHJI operon. Mol. Gen. Genet. 222: 104-111.
Blasing OE, Ernst K, Streubel M, Westhoff P, Svensson P 2002 The non-photosynthetic phosphoenolpyruvate carboxylases of the C4 dicot Flaveria trinervia - implications for the evolution of C4 photosynthesis. Planta 215: 448-456.
Blee K, Choi JW, O'Connell AP, Jupe SC, Schuch W, Lewis NG, Bolwell GP 2001 Antisense and sense expression of cDNA coding for CYP73A15, a class II cinnamate 4-hydroxylase, leads to a delayed and reduced production of lignin in tobacco. Phytochemistry 57: 1159-1166.
Blount JW, Korth KL, Masoud SA, Rasmussen S, Lamb C, Dixon RA 2000 Altering expression of cinnamic acid 4-hydroxylase in transgenic plants provides evidence for a feedback loop at the entry point into the phenylpropanoid pathway. Plant Physiol. 122: 107-116.
Blount JW, Masoud S, Sumner LW, Huhman D, Dixon RA 2002 Over-expression of cinnamate 4-hydroxylase leads to increased accumulation of acetosyringone in elicited tobacco cell-suspension cultures. Planta 214: 902-910.
Boag S, Agostino A, Furbank RT, Hatch MD 1989 Effects of external Mg2+ and pH on the photosynthetic activities and stromal pH of intact chloroplasts isolated from C4 plants. Aust. J. Plant Physiol. 16: 379-390.
Bokoch GM 2003 Biology of the p21-activated kinases. Annu. Rev. Biochem. 72: 743-781.
Bones AM, Rossiter JT 2006 The enzymic and chemically induced decomposition of glucosinolates. Phytochemistry 67: 1053-1067.
Bootten TJ, Harris PJ, Melton LD, Newman RH 2004 Solid-state 13C-NMR spectroscopy shows that the xyloglucans in the primary cell walls of mung bean (Vigna radiata L.) occur in different domains: a new model for xyloglucan-cellulose interactions in the cell wall. J. Exp. Bot. 55: 571-583.
Borland AM, Tecsi LI, Leegood RC, Walker RP 1998 Inducibility of Crassulacean acid metabolism (CAM) in Clusia species; physiological/biochemical characterisation and intercellular localization of carboxylation and decarboxylation processes in three species which exhibit different degrees of CAM. Planta 205: 342-351.
Botella JR, Schlagnhaufer CD, Arteca JM, Arteca RN, Phillips AT 1993 Identification of two new members of the 1-aminocyclopropane-1-carboxylate synthase-encoding multigene family in mung bean. Gene 123: 249-253.
Brown NJ, Parsley K, Hibberd JM 2005 The future of C4 research--maize, Flaveria or Cleome? Trends Plant Sci. 10: 215-221.
Brown RH, Byrd GT 1993 Estimation of bundle sheath cell conductance in C4 species and O2 insensitivity of photosynthesis. Plant Physiol. 103: 1183-1188.
Brown RH, Byrd GT, Bouton JH, Bassett CL 1993 Photosynthetic characteristics of segregates from hybrids between Flaveria brownii (C4 like) and Flaveria linearis (C3-C4). Plant Physiol. 101: 825-831.
Brownell PF, Bielig LM, Grof CPL 1991 Increased carbonic anhydrase activity in leaves of sodium- deficient C4 plants. Aust. J. Plant Physiol. 18: 589-592.
Buchanan CD, Lim S, Salzman RA, Kagiampakis I, Morishige DT, Weers BD, Klein RR, Pratt LH, Cordonnier-Pratt MM, Klein PE, Mullet JE 2005 Sorghum bicolor's transcriptome response to dehydration, high salinity and ABA. Plant Mol. Biol. 58: 699-720.
Budde RJ, Holbrook GP, Chollet R 1985 Studies on the dark/light regulation of maize leaf pyruvate, orthophosphate dikinase by reversible phosphorylation. Arch. Biochem. Biophys. 242: 283-290.
Burke JR, Witmer MR, Zusi FC, Gregor KR, Davern LB, Padmanabha R, Swann RT, Smith D, Tredup JA, Micanovic R, Manly SP, Villafranca JJ, Tramposch KM 1999 Competitive, reversible inhibition of cytosolic phospholipase A2 at the lipid-water interface by choline derivatives that partially partition into the phospholipid bilayer. J. Biol. Chem. 274: 18864-18871.
Burnell JN, Hatch MD 1985 Regulation of C4 photosynthesis: purification and properties of the protein catalyzing ADP-mediated inactivation and Pi- mediated activation of pyruvate, Pi-dikinase. Arch. Biochem. Biophys. 237: 490-503.
Burnell JN, Hatch MD 1983 Dark-light regulation of pyruvate, Pi-dikinase in C4 plants: evidence that the same protein catalyzes activation and inactivation. Biochem. Biophys. Res. Commun. 111: 288-293.
Burnell JN, Hatch MD 1984 Regulation of C4 photosynthesis: catalytic phosphorylation as a prerequisite for ADP-mediated inactivation of pyruvate, Pi-dikinase. Biochem. Biophys. Res. Commun. 118: 65-72.
Burnell JN, Hatch MD 1984 Regulation of C4 photosynthesis: identification of a catalytically important histidine residue and its role in the regulation of pyruvate, Pi dikinase. Arch. Biochem. Biophys. 231: 175-182.
Burnell JN, Hatch MD 1988 Low bundle sheath carbonic anhydrase is apparently essential for effective C4 pathway operation. Plant Physiol. 86: 1252-1256.
Burnell JN, Hatch MD 1988 Photosynthesis in phosphoenolpyruvate carboxykinase-type C4 plants: photosynthetic activities of isolated bundle sheath cells from Urochloa panicoides. Arch. Biochem. Biophys. 260: 177-186.
Burnell JN, Hatch MD 1988 Photosynthesis in phosphoenolpyruvate carboxykinase-type C4 plants: pathways of C4 acid decarboxylation in bundle sheath cells of Urochloa panicoides. Arch. Biochem. Biophys. 260: 187-199.
Burnell JN, Jenkins CLD, Hatch MD 1986 Regulation of C4 photosynthesis: a role for pyruvate in regulating pyruvate, Pi-dikinase activity in vivo. Aust. J. Plant Physiol. 13: 203-210.
Cabib E, Drgonova J, Drgon T 1998 Role of small G proteins in yeast cell polarization and wall biosynthesis. Annu. Rev. Biochem. 67: 307-333.
Cai ZQ, Chen YJ, Bongers F 2007 Seasonal changes in photosynthesis and growth of Zizyphus attopensis seedlings in three contrasting microhabitats in a tropical seasonal rain forest. Tree Physiol. 27: 827-836.
Calatayud PA, Baron CH, Velasquez H, Arroyave JA, Lamaze T 2002 Wild Manihot species do not possess C4 photosynthesis. Ann. Bot. (Lond.) 89: 125-127.
Camara B, Bouvier F 2004 Oxidative remodeling of plastid carotenoids. Arch. Biochem. Biophys. 430: 16-21.
Campbell CD, Sage RF 2002 Interactions between atmospheric CO2 concentration and phosphorus nutrition on the formation of proteoid roots in white lupin (Lupinus albus L.). Plant Cell Environ. 25: 1051-1059.
Campbell WH, Black CC 1978 The relationship of CO2 assimilation pathways and photorespiration to the physiological quantum requirement of green plant photosynthesis. Biosystems 10: 253-264.
Cannon CL, Basavappa S, Strange K 1998 Intracellular ionic strength regulates the volume sensitivity of a swelling-activated anion channel. Am. J. Physiol. 275: C416-C422.
Carnal NW, Agostino A, Hatch MD 1993 Photosynthesis in phosphoenolpyruvate carboxykinase-type C4 plants: mechanism and regulation of C-4 acid decarboxylation in bundle-sheath cells. Arch. Biochem. Biophys. 306: 360-367.
Carter CJ, Thornburg RW 2004 Tobacco nectarin V is a flavin-containing berberine bridge enzyme-like protein with glucose oxidase activity. Plant Physiol. 134: 460-469.
Casati P, Lara MV, Andreo CS 2000 Induction of a C(4)-like mechanism of CO(2) fixation in Egeria densa, a submersed aquatic species. Plant Physiol. 123: 1611-1622.
Cavin JF, Dartois V, Labarre C, Divies C 1999 Cloning of branched chain amino acid biosynthesis genes and assays of alpha-acetolactate synthase activities in Leuconostoc mesenteroides subsp. cremoris. Res. Microbiol. 150: 189-198.
Chan C, Berthiaume F, Washizu J, Toner M, Yarmush ML 2002 Metabolic pre-conditioning of cultured cells in physiological levels of insulin: generating resistance to the lipid-accumulating effects of plasma in hepatocytes. Biotechnol. Bioeng. 78: 753-760.
Chapman KSR, Berry JA, Hatch MD 1980 Photosynthetic metabolism in bundle sheath cells of the C4 species Zea mays: sources of ATP and NADPH and the contribution of photosystem II. Arch. Biochem. Biophys. 202: 330-341.
Chapman KSR, Hatch MD 1983 Intracellular location of phosphoenolpyruvate carboxykinase and other C4 photosynthetic enzymes in mesophyll and bundle sheath protoplasts of Panicum maximum. Plant Sci. Lett. 29: 145-154.
Chapman KSR, Hatch MD 1981 Regulation of C4 photosynthesis: mechanism of activation and inactivation of extracted pyruvate, inorganic-phosphate dikinase in relation to dark-light regulation. Arch. Biochem. Biophys. 210: 82-89.
Chapman KSR, Hatch MD 1979 Aspartate stimulation of malate decarboxylation in Zea mays bundle sheath cells: possible role in regulation of C4 photosynthesis. Biochem. Biophys. Res. Commun. 86: 1274-1280.
Chapman KSR, Hatch MD 1977 Regulation of mitochondrial NAD-malic enzyme involved in C4 pathway photosynthesis. Arch. Biochem. Biophys. 184: 298-306.
Chapman KSR, Hatch MD 1977 Regulation of mitochondrial malate decarboxylation involved in C4 pathway photosynthesis. Proc. Aust. Biochem. Soc. 10: 39-39.
Chapman KSR, Hatch MD 1981 Aspartate decarboxylation in bundle sheath cells of Zea mays and its possible contribution to C4 photosynthesis. Aust. J. Plant Physiol. 8: 237-248.
Chastain CJ, Fries JP, Vogel JA, Randklev CL, Vossen AP, Dittmer SK, Watkins EE, Fiedler LJ, Wacker SA, Meinhover KC, Sarath G, Chollet R 2002 Pyruvate, orthophosphate dikinase in leaves and chloroplasts of C3 plants undergoes light-/dark-induced reversible phosphorylation. Plant Physiol. 128: 1368-1378.
Chastain CJ, Heck JW, Colquhoun TA, Voge DG, Gu XY 2006 Posttranslational regulation of pyruvate, orthophosphate dikinase in developing rice (Oryza sativa) seeds. Planta 224: 924-934.
Chattopadhyay K, Mateu CG, Mandal P, Pujol CA, Damonte EB, Ray B 2007 Galactan sulfate of Grateloupia indica: isolation, structural features and antiviral activity. Phytochemistry 68: 1428-1435.
Chaves MM, Oliveira MM 2004 Mechanisms underlying plant resilience to water deficits: prospects for water-saving agriculture. J. Exp. Bot. 55: 2365-2384.
Chen ZH, Walker RP, Acheson RM, Leegood RC 2002 Phosphoenolpyruvate carboxykinase assayed at physiological concentrations of metal ions has a high affinity for CO2. Plant Physiol. 128: 160-164.
Chen A, Komives EA, Schroeder JI 2006 An improved grafting technique for mature Arabidopsis plants demonstrates long-distance shoot-to-root transport of phytochelatins in Arabidopsis. Plant Physiol. 141: 108-120.
Chen DX, Coughenour MB, Knapp AK, Owensby CE 1994 Mathematical simulation of C4 grass photosynthesis in ambient and elevated CO2. Ecological Modelling 73: 63-80.
Chen LM, Li KZ, Miwa T, Izui K 2004 Overexpression of a cyanobacterial phosphoenolpyruvate carboxylase with diminished sensitivity to feedback inhibition in Arabidopsis changes amino acid metabolism. Planta 219: 440-449.
Chen W, Wright L, Li S, Cosloy SD, Russell CS 1996 Expression of glutamyl-tRNA reductase in Escherichia coli. Biochim. Biophys. Acta 1309: 109-121.
Chen YQ, Gulotta M, Cheung HT, Callender R 1999 Light activates reduction of methotrexate by NADPH in the ternary complex with Escherichia coli dihydrofolate reductase. Photochem. Photobiol. 69: 77-85.
Chhina N, Kuestermann E, Halliday J, Simpson LJ, Macdonald IA, Bachelard HS, Morris PG 2001 Measurement of human tricarboxylic acid cycle rates during visual activation by 13C magnetic resonance spectroscopy. J. Neurosci. Res. 66: 737-746.
Chikaraishi Y, Naraoka H 2003 Compound-specific deltaD-delta13C analyses of n-alkanes extracted from terrestrial and aquatic plants. Phytochemistry 63: 361-371.
Chikaraishi Y, Naraoka H, Poulson SR 2004 Hydrogen and carbon isotopic fractionations of lipid biosynthesis among terrestrial (C3, C4 and CAM) and aquatic plants. Phytochemistry 65: 1369-1381.
Chinthapalli B, Murmu J, Raghavendra AS 2003 Dramatic difference in the responses of phosphoenolpyruvate carboxylase to temperature in leaves of C3 and C4 plants. J. Exp. Bot. 54: 707-714.
Cho HJ, Brotherton JE, Widholm JM 2004 Use of the tobacco feedback-insensitive anthranilate synthase gene (ASA2) as a selectable marker for legume hairy root transformation. Plant Cell Rep. 23: 104-113.
Chuong SD, Franceschi VR, Edwards GE 2006 The cytoskeleton maintains organelle partitioning required for single-cell C4 photosynthesis in Chenopodiaceae species. Plant Cell 18: 2207-2223.
Clayton H, Ap Rees T 1992 Respiratory metabolism of the bundle sheath of maize leaves. J. Plant Physiol. 139: 350-354.
Collatz GJ, Ribascarbo M, Berry JA 1992 Coupled photosynthesis-stomatal conductance model for leaves of C4 plants. Aust. J. Plant Physiol. 19: 519-538.
Colon GE, Nguyen TT, Jetten MS, Sinskey AJ, Stephanopoulos G 1995 Production of isoleucine by overexpression of ilvA in a Corynebacterium lactofermentum threonine producer. Appl. Microbiol. Biotechnol. 43: 482-488.
Cook A, Bono F, Jinek M, Conti E 2007 Structural biology of nucleocytoplasmic transport. Annu. Rev. Biochem. 76: 647-671.
Coursol S, Giglioli-Guivarc'H N, Vidal J, Pierre JN 2000 An increase in phosphoinositide-specific phospholipase C activity precedes induction of C4 phosphoenolpyruvate carboxylase phosphorylation in illuminated and NH4Cl-treated protoplasts from Digitaria sanguinalis. Plant J. 23: 497-506.
Coursol S, Pierre JN, Vidal J, Grisvard J 2002 Cloning and characterization of a phospholipase C from the C4 plant Digitaria sanguinalis. J. Exp. Bot. 53: 1521-1524.
Cousins AB, Adam NR, Wall GW, Kimball BA, Pinter PJ Jr, Ottman MJ, Leavitt SW, Webber AN 2003 Development of C4 photosynthesis in sorghum leaves grown under free-air CO2 enrichment (FACE). J. Exp. Bot. 54: 1969-1975.
Cousins AB, Adam NR, Wall GW, Kimball BA, Pinter PJ, Ottman MJ, Leavitt SW, Webber AN 2002 Photosystem II energy use, non-photochemical quenching and the xanthophyll cycle in Sorghum bicolor grown under drought and free-air CO2 enrichment (FACE) conditions. Plant Cell Environ. 25: 1551-1559.
Cousins AB, Badger MR, von Caemmerer S 2006 A transgenic approach to understanding the influence of carbonic anhydrase on C18OO discrimination during C4 photosynthesis. Plant Physiol. 142: 662-672.
Cousins AB, Badger MR, von Caemmerer S 2006 Carbonic anhydrase and its influence on carbon isotope discrimination during C4 photosynthesis. Insights from antisense RNA in Flaveria bidentis. Plant Physiol. 141: 232-242.
Cousins AB, Bloom AJ 2004 Oxygen consumption during leaf nitrate assimilation in a C-3 and C-4 plant: the role of mitochondrial respiration. Plant Cell Environ. 27: 1537-1545.
Cousins AB, Bloom AJ 2003 Influence of elevated CO2 and nitrogen nutrition on photosynthesis and nitrate photo-assimilation in maize (Zea mays L.). Plant Cell Environ. 26: 1525-1530.
Crafts-Brandner SJ, Salvucci ME 2002 Sensitivity of photosynthesis in a C4 plant, maize, to heat stress. Plant Physiol. 129: 1773-1780.
Cretin C, Bakrim N, Keryer E, Santi S, Lepiniec L, Vidal J, Gadal P 1991 Production in Escherichia coli of active Sorghum phosphoenolpyruvate carboxylase which can be phosphorylated. Plant Mol. Biol. 17: 83-88.
Curtis PS, Drake BG, Whigham DF 1989 Nitrogen and carbon dynamics in C3 and C4 estuarine marsh plants grown under elevated CO2 in situ. Oecologia 78: 297-301.
Cutler AJ, Krochko JE 1999 Formation and breakdown of ABA. Trends Plant Sci. 4: 472-478.
da Silva JM, Arrabaca MC 2004 Photosynthesis in the water-stressed C-4 grass Setaria sphacelata is mainly limited by stomata with both rapidly and slowly imposed water deficits. Physiol. Plant. 121: 409-420.
Dai Z, Ku M, Edwards GE 1993 C4 photosynthesis. The CO2-concentrating mechanism and photorespiration. Plant Physiol. 103: 83-90.
Dall'Osto L, Cazzaniga S, North H, Marion-Poll A, Bassi R 2007 The Arabidopsis aba4-1 mutant reveals a specific function for neoxanthin in protection against photooxidative stress. Plant Cell 19: 1048-1064.
Damari-Weissler H, Ginzburg A, Gidoni D, Mett A, Krassovskaya I, Weber AP, Belausov E, Granot D 2007 Spinach SoHXK1 is a mitochondria-associated hexokinase. Planta 226: 1053-1058.
Damerval C, Nadot S 2007 Evolution of perianth and stamen characteristics with respect to floral symmetry in Ranunculales. Ann. Bot. (Lond.) 100: 631-640.
Das B, Ramu R, Rao YK, Reddy MR, Harish H, Reddy VS, Ramakrishna KV 2006 Acylated 5,7,2',6'-oxygenated flavone glycosides from Andrographis alata. Phytochemistry 67: 978-983.
Datko AH, Mudd SH 1986 Uptake of choline and ethanolamine by Lemna paucicostata Hegelm 6746. Plant Physiol. 81: 285-288.
Davies EJ, Tetlow IJ, Bowsher CG, Emes MJ 2003 Molecular and biochemical characterization of cytosolic phosphoglucomutase in wheat endosperm (Triticum aestivum L. cv. Axona). J. Exp. Bot. 54: 1351-1360.
De Santis A, Landi P, Genchi G 1999 Changes of mitochondrial properties in maize seedlings associated with selection for germination at low temperature. Fatty acid composition, cytochrome c oxidase, and adenine nucleotide translocase activities. Plant Physiol. 119: 743-754.
de Souza Filho GA, da Silva MJ, Vettore AL, Yunes JA, Leite A, Arruda P, Ottoboni LM 1999 Identification of a DNA-binding factor that recognizes an alpha-coixin promoter and interacts with a Coix Opaque-2 like protein. Plant Mol. Biol. 39: 95-104.
Desai RP, Harris LM, Welker NE, Papoutsakis ET 1999 Metabolic flux analysis elucidates the importance of the acid-formation pathways in regulating solvent production by Clostridium acetobutylicum. Metab. Eng. 1: 206-213.
Dever LV, Bailey KJ, Lacuesta M, Leegood RC, Lea PJ 1996 The isolation and characterization of mutants of the C4 plant Amaranthus edulis. Comptes Rendus Acad. Sci. Ser. III-Sci. Vie-Life Sci. 319: 951-959.
Dever LV, Bailey KJ, Leegood RC, Lea PJ 1997 Control of photosynthesis in Amaranthus edulis mutants with reduced amounts of PEP carboxylase. Aust. J. Plant Physiol. 24: 469-476.
Dever LV, Blackwell RD, Fullwood NJ, Lacuesta M, Leegood RC, Onek LA, Pearson M, Lea PJ 1995 The isolation and characterization of mutants of the C4 photosynthetic pathway. J. Exp. Bot. 46: 1363-1376.
Dever LV, Pearson M, Ireland RJ, Leegood RC, Lea PJ 1998 The isolation and characterisation of a mutant of the C4 plant Amaranthus edulis deficient in NAD-malic enzyme activity. Planta 206: 649-656.
Devi MT, Raghavendra AS 1992 Light activation of phosphoenolpyruvate carboxylase in maize mesophyll protoplasts. J. Plant Physiol. 139: 431-435.
Devi MT, Raghavendra AS 1993 Photorespiration in C3-C4, intermediate species of Alternanthera and Parthenium: reduced ammonia production and increased capacity CO2 refixation in the light. Photosynth. Res. 38: 177-184.
Devi MT, Raghavendra AS 1994 Formation of photorespiratory glycolate and glyoxylate in leaf disks of C3-C4 intermediates: reduced sensitivity to external bicarbonate. Photosynthetica 30: 455-463.
Devi MT, Raghavendra AS 1993 Partial reduction in activities of photorespiratory enzymes in C3-C4 intermediates of Alternanthera and Parthenium. J. Exp. Bot. 44: 779-784.
Devi MT, Rajagopalan AV, Raghavendra AS 1996 Purification and properties of glycolate oxidase from plants with different photosynthetic pathways: Distinctness of C-4 enzyme from that of a C-3 species and a C-3-C-4 intermediate. Photosynth. Res. 47: 231-238.
Devi MT, Rajagopalan AV, Raghavendra AS 1995 Predominant localization of mitochondria enriched with glycine decarboxylating enzymes in bundle-sheath cells of Alternanthera tenella, a C3-C4 intermediate species. Plant Cell Environ. 18: 589-594.
Dickson RA, Houghton PJ, Hylands PJ 2007 Antibacterial and antioxidant cassane diterpenoids from Caesalpinia benthamiana. Phytochemistry 68: 1436-1441.
Dieguez SC, de la Pena ML, Gomez EF 2005 Volatile composition and sensory characters of commercial Galician orujo spirits. J. Agric. Food Chem. 53: 6759-6765.
Dijkema C, Kester HC, Visser J 1985 13C NMR studies of carbon metabolism in the hyphal fungus Aspergillus nidulans. Proc. Natl. Acad. Sci. U.S.A. 82: 14-18.
Dolfini S, Consonni G, Viotti C, Dal Pra M, Saltini G, Giulini A, Pilu R, Malgioglio A, Gavazzi G 2007 A mutational approach to the study of seed development in maize. J. Exp. Bot. 58: 1197-1205.
Domingues L, Dantas MM, Lima N, Teixeira JA 1999 Continuous ethanol fermentation of lactose by a recombinant flocculating Saccharomyces cerevisiae strain. Biotechnol. Bioeng. 64: 692-697.
Doncaster HD, Adcock MD, Leegood RC 1989 Regulation of photosynthesis in leaves of C4 plants following a transition from high to low light. Biochim. Biophys. Acta 973: 176-184.
Doncaster HD, Leegood RC 1990 Factors regulating the metabolism of oxaloacetate to malate in leaves of C4 plants. J. Plant Physiol. 136: 330-335.
Dong L, Ermolova NV, Chollet R 2001 Partial purification and biochemical characterization of a heteromeric protein phosphatase 2A holoenzyme from maize (Zea mays L.) leaves that dephosphorylates C4 phosophoenolpyruvate carboxylase. Planta 213: 379-389.
Douce R, Neuburger M 1999 Biochemical dissection of photorespiration. Curr. Opin. Plant Biol. 2: 214-222.
Dray E, Siaud N, Dubois E, Doutriaux MP 2006 Interaction between Arabidopsis Brca2 and its partners: Rad51, Dmc1 and Dss. Plant Physiol. 140: 1059-1069.
Drennan PM, Nobel PS 2000 Responses of CAM species to increasing atmospheric CO2 concentrations. Plant Cell Environ. 23: 767-781.
Drincovich MF, Casati P, Andreo CS, Chessin SJ, Franceschi VR, Edwards GE, Ku MS 1998 Evolution of C4 photosynthesis in Flaveria species. Isoforms of NADP-malic enzyme. Plant Physiol. 117: 733-744.
Drouet JL, Bonhomme R 2004 Effect of 3D nitrogen, dry mass per area and local irradiance on canopy photosynthesis within leaves of contrasted heterogeneous maize crops. Ann. Bot. (Lond.) 93: 699-710.
Drysch A, El Massaoudi M, Mack C, Takors R, de Graaf AA, Sahm H 2003 Production process monitoring by serial mapping of microbial carbon flux distributions using a novel Sensor Reactor approach: II--(13)C-labeling-based metabolic flux analysis and L-lysine production. Metab. Eng. 5: 96-107.
Duran-Patron R, O'Hagan D, Hamilton JTG, Wong CW 2000 Biosynthetic studies on the tropane ring system of the tropane alkaloids from Datura stramonium. Phytochemistry 53: 777-784.
Dutkowski J, Tiuryn J 2007 Identification of functional modules from conserved ancestral protein-protein interactions. Bioinformatics 23: i149-i158.
Dwyer SA, Ghannoum O, Nicotra A, von Caemmerer S 2007 High temperature acclimation of C4 photosynthesis is linked to changes in photosynthetic biochemistry. Plant Cell Environ. 30: 53-66.
Dyer MD, Murali TM, Sobral BW 2007 Computational prediction of host-pathogen protein-protein interactions. Bioinformatics 23: i159-i166.
Echevarria C, Garcia-Maurino S, Alvarez R, Soler A, Vidal J 2001 Salt stress increases the Ca2+-independent phosphoenolpyruvate carboxylase kinase activity in Sorghum leaves. Planta 214: 283-287.
Echevarria C, Pacquit V, Bakrim N, Osuna L, Delgado B, Arriodupont M, Vidal J 1994 The effect of pH on the covalent and metabolic control of C4 phosphoenolpyruvate carboxylase from sorghum leaf. Arch. Biochem. Biophys. 315: 425-430.
Eckardt NA 2006 Single-cell C4 photosynthesis in Chenopodiaceae species. Plant Cell 18: 2100a.
Edwards GE, Franceschi VR, Voznesenskaya EV 2004 Single-cell C4 photosynthesis versus the dual-cell (Kranz) paradigm. Annu. Rev. Plant Biol. 55: 173-196.
Edwards GE, Furbank RT, Hatch MD, Osmond CB 2001 What does it take to be C4? Lessons from the evolution of C(4) photosynthesis. Plant Physiol. 125: 46-49.
Edwards GE, Ku SB, Hatch MD 1979 Isolation of bundle sheath protoplasts from C4 species. Plant Physiol. 63: 63.
Edwards GE, Lilley RM, Craig S, Hatch MD 1979 Isolation of intact and functional chloroplasts from mesophyll and bundle sheath protoplasts of the C4 plant Panicum miliaceum. Plant Physiol. 63: 821-827.
Edwards GE, Nakamoto H, Burnell JN, Hatch MD 1985 Pyruvate, Pi-dikinase and NADP-malate dehydrogenase in C4 photosynthesis: properties and mechanism of light dark regulation. Annu. Rev. Plant Physiol. Plant Mol. Biol. 36: 255-286.
El-Din El-Assal S, Le J, Basu D, Mallery EL, Szymanski DB 2004 DISTORTED2 encodes an ARPC2 subunit of the putative Arabidopsis ARP2/3 complex. Plant J. 38: 526-538.
EL-Sharkawy MA 2003 Cassava biology and physiology. Plant Mol. Biol. 53: 621-641.
El-Sharkawy MA 2004 Cassava biology and physiology. Plant Mol. Biol. 56: 481-501.
Ellis RH, Hong TD 2006 Temperature sensitivity of the low-moisture-content limit to negative seed longevity--moisture content relationships in hermetic storage. Ann. Bot. (Lond.) 97: 785-791.
Engelmann S, Blasing OE, Gowik U, Svensson P, Westhoff P 2003 Molecular evolution of C4 phosphoenolpyruvate carboxylase in the genus Flaveria: a gradual increase from C3 to C4 characteristics. Planta 217: 717-725.
Engelmann S, Blasing OE, Westhoff P, Svensson P 2002 Serine 774 and amino acids 296 to 437 comprise the major C4 determinants of the C4 phosphoenolpyruvate carboxylase of Flaveria trinervia. FEBS Lett. 524: 11-14.
Ernst K, Westhoff P 1997 The phosphoenolpyruvate carboxylase (ppc) gene family of Flaveria trinervia (C4) and F. pringlei (C3): molecular characterization and expression analysis of the ppcB and ppcC genes. Plant Mol. Biol. 34: 427-443.
Estrada-Gil JK, Fernandez-Lopez JC, Hernandez-Lemus E, Silva-Zolezzi I, Hidalgo-Miranda A, Jimenez-Sanchez G, Vallejo-Clemente EE 2007 GPDTI: a Genetic Programming Decision Tree induction method to find epistatic effects in common complex diseases. Bioinformatics 23: i167-i174.
Ewing RM, Jenkins GI, Langdale JA 1998 Transcripts of maize RbcS genes accumulate differentially in C3 and C4 tissues. Plant Mol. Biol. 36: 593-599.
Facchini PJ, De Luca V 1994 Differential and tissue-specific expression of a gene family for tyrosine/dopa decarboxylase in opium poppy. J. Biol. Chem. 269: 26684-26690.
Facchini PJ, Penzes-Yost C, Samanani N, Kowalchuk B 1998 Expression patterns conferred by tyrosine/dihydroxyphenylalanine decarboxylase promoters from opium poppy are conserved in transgenic tobacco. Plant Physiol. 118: 69-81.
Fanutti C, Gidley MJ, Reid JS 1996 Substrate subsite recognition of the xyloglucan endo-transglycosylase or xyloglucan-specific endo-(1-->4)-beta-D-glucanase from the cotyledons of germinated nasturtium (Tropaeolum majus L.) seeds. Planta 200: 221-228.
Farquhar GD, Gan KS 2003 On the progressive enrichment of the oxygen isotopic composition of water along a leaf (Reprinted from Plant, Cell and Environment, vol 26, pg 801-819, 2003). Plant Cell Environ. 26: 1579-1597.
Farquhar GD, Gan KS 2003 On the progressive enrichment of the oxygen isotopic composition of water along a leaf. Plant Cell Environ. 26: 801-819.
Farquhar GD, von Caemmerer S, Berry JA 2001 Models of photosynthesis. Plant Physiol. 125: 42-45.
Farrant RD, Walker V, Mills GA, Mellor JM, Langley GJ 2001 Pyridoxal phosphate de-activation by pyrroline-5-carboxylic acid. Increased risk of vitamin B6 deficiency and seizures in hyperprolinemia type II. J. Biol. Chem. 276: 15107-15116.
Feng L, Geck MK, Eliot AC, Kirsch JF 2000 Aminotransferase activity and bioinformatic analysis of 1-aminocyclopropane-1-carboxylate synthase. Biochemistry 39: 15242-15249.
Fereres E, Soriano MA 2007 Deficit irrigation for reducing agricultural water use. J. Exp. Bot. 58: 147-159.
Finnegan PM, Suzuki S, Ludwig M, Burnell JN 1999 Phosphoenolpyruvate carboxykinase in the C4 monocot Urochloa panicoides is encoded by four differentially expressed genes. Plant Physiol. 120: 1033-1042.
Fisslthaler B, Meyer G, Bohnert HJ, Schmitt JM 1995 Age-dependent induction of pyruvate, orthophosphate dikinase in Mesembryanthemum crystallinum L. Planta 196: 492-500.
Fowler JE, Vejlupkova Z, Goodner BW, Lu G, Quatrano RS 2004 Localization to the rhizoid tip implicates a Fucus distichus Rho family GTPase in a conserved cell polarity pathway. Planta 219: 856-866.
Franke R, McMichael CM, Meyer K, Shirley AM, Cusumano JC, Chapple C 2000 Modified lignin in tobacco and poplar plants over-expressing the Arabidopsis gene encoding ferulate 5-hydroxylase. Plant J. 22: 223-234.
Fravolini A, Williams DG, Thompson TL 2002 Carbon isotope discrimination and bundle sheath leakiness in three C4 subtypes grown under variable nitrogen, water and atmospheric CO2 supply. J. Exp. Bot. 53: 2261-2269.
Fujii H, Verslues PE, Zhu JK 2007 Identification of two protein kinases required for abscisic acid regulation of seed germination, root growth, and gene expression in Arabidopsis. Plant Cell 19: 485-494.
Fujio T, Maruyama A 1997 Enzymatic production of pyrimidine nucleotides using Corynebacterium ammoniagenes cells and recombinant Escherichia coli cells: enzymatic production of CDP-choline from orotic acid and choline chloride (Part I). Biosci. Biotechnol. Biochem. 61: 956-959.
Fukayama H, Tsuchida H, Agarie S, Nomura M, Onodera H, Ono K, Lee BH, Hirose S, Toki S, Ku MS, Makino A, Matsuoka M, Miyao M 2001 Significant accumulation of C4-specific pyruvate, orthophosphate dikinase in a C3 plant, rice. Plant Physiol. 127: 1136-1146.
Fuller DQ 2007 Contrasting patterns in crop domestication and domestication rates: recent archaeobotanical insights from the old world. Ann. Bot. (Lond.) May 10 [Epub ahead of print].
Furbank RT, Agostiino A, Hatch MD 1990 C4 acid decarboxylation and photosynthesis in bundle sheath cells of NAD-malic enzyme-type-C-4 plants: mechanism and the role of malate and orthophosphate. Arch. Biochem. Biophys. 276: 374-381.
Furbank RT, Agostino A, Hatch MD 1991 Regulation of C4 photosynthesis: modulation of mitochondrial NAD-malic enzyme by adenylates. Arch. Biochem. Biophys. 289: 376-381.
Furbank RT, Badger MR 1983 Photorespiratory characteristics of isolated bundle sheath strands of C4 monocotyldedons. Aust. J. Plant Physiol. 10: 451-458.
Furbank RT, Hatch MD 1987 Mechanism of C4 photosynthesis: the size and composition of the inorganic carbon pool in bundle sheath cells. Plant Physiol. 85: 958-964.
Furbank RT, Jenkins CLD, Hatch MD 1990 C4 photosynthesis: quantum requirement, C4 acid overcycling and Q-cycle involvement. Aust. J. Plant Physiol. 17: 1-7.
Furbank RT, Jenkins CLD, Hatch MD 1989 CO2 concentrating mechanism of C4 photosynthesis: permeability of isolated bundle sheath cells to inorganic carbon. Plant Physiol. 91: 1364-1371.
Furbank RT, Taylor WC 1995 Regulation of photosynthesis in C3 and C4 plants: a molecular approach. Plant Cell 7: 797-807.
Furukawa T, Ishibashi T, Kimura S, Tanaka H, Hashimoto J, Sakaguchi K 2003 Characterization of all the subunits of replication factor C from a higher plant, rice (Oryza sativa L.), and their relation to development. Plant Mol. Biol. 53: 15-25.
Furumoto T, Hata S, Izui K 1999 cDNA cloning and characterization of maize phosphoenolpyruvate carboxykinase, a bundle sheath cell-specific enzyme. Plant Mol. Biol. 41: 301-311.
Gallardo F, Miginiac-Maslow M, Sangwan RS, Decottignies P, Keryer E, Dubois F, Bismuth E, Galvez S, Sangwan-Norreel B, Gadal P, et al 1995 Monocotyledonous C4 NADP(+)-malate dehydrogenase is efficiently synthesized, targeted to chloroplasts and processed to an active form in transgenic plants of the C3 dicotyledon tobacco. Planta 197: 324-332.
Gallusci P, Varotto S, Matsuoko M, Maddaloni M, Thompson RD 1996 Regulation of cytosolic pyruvate, orthophosphate dikinase expression in developing maize endosperm. Plant Mol. Biol. 31: 45-55.
Galmes J, Pou A, Alsina MM, Tomas M, Medrano H, Flexas J 2007 Aquaporin expression in response to different water stress intensities and recovery in Richter-110 (Vitis sp.): relationship with ecophysiological status. Planta 226: 671-681.
Gan KS, Wong SC, Yong JWH, Farquhar GD 2003 Evaluation of models of leaf water O-18 enrichment using measurements of spatial patterns of vein xylem water, leaf water and dry matter in maize leaves. Plant Cell Environ. 26: 1479-1495.
Gao Q, Zhao P, Zeng X, Cai X, Shen W 2002 A model of stomatal conductance to quantify the relationship between leaf transpiration, microclimate and soil water stress. Plant Cell Environ. 25: 1373-1381.
Garcia-Espinosa MA, Rodrigues TB, Sierra A, Benito M, Fonseca C, Gray HL, Bartnik BL, Garcia-Martin ML, Ballesteros P, Cerdan S 2004 Cerebral glucose metabolism and the glutamine cycle as detected by in vivo and in vitro NMR spectroscopy. Neurochem. Int. 45: 297-303.
Garcia-Maurino S, Monreal JA, Alvarez R, Vidal J, Echevarria C 2003 Characterization of salt stress-enhanced phosphoenolpyruvate carboxylase kinase activity in leaves of Sorghum vulgare: independence from osmotic stress, involvement of ion toxicity and significance of dark phosphorylation. Planta 216: 648-655.
Gastal F, Lemaire G 2002 N uptake and distribution in crops: an agronomical and ecophysiological perspective. J. Exp. Bot. 53: 789-799.
Geffers R, Cerff R, Hehl R 2000 Anaerobiosis-specific interaction of tobacco nuclear factors with cis-regulatory sequences in the maize GapC4 promoter. Plant Mol. Biol. 43: 11-21.
Gerhardt B, Fischer K, Deittert M, Wenzel B 1999 Substrate inhibition and affinities of the glyoxysomal beta-oxidation of sunflower cotyledons. Planta 209: 355-363.
Ghannoum O, Evans JR, Chow WS, Andrews TJ, Conroy JP, von Caemmerer S 2005 Faster Rubisco is the key to superior nitrogen-use efficiency in NADP-malic enzyme relative to NAD-malic enzyme C4 grasses. Plant Physiol. 137: 638-650.
Ghannoum O, Siebke K, von Caemmerer S, Conroy JP 1998 The photosynthesis of young Panicum C-4 leaves is not C-3-like. Plant Cell Environ. 21: 1123-1131.
Ghannoum O, von Caemmerer S, Conroy JP 2001 Carbon and water economy of Australian NAD-ME and NADP-ME C4 grasses. Aust. J. Plant Physiol. 28: 213-223.
Ghannoum O, von Caemmerer S, Conroy JP 2001 Plant water use efficiency of 17 Australian NAD-ME and NADP-ME C4 grasses at ambient and elevated CO2 partial pressure. Aust. J. Plant Physiol. 28: 1207-1217.
Ghannoum O, von Caemmerer S, Ziska LH, Conroy JP 2000 The growth response of C4 plants to rising atmospheric CO2 partial pressure: a reassessment. Plant Cell Environ. 23: 931-942.
Gibson KM, Sweetman L, Nyhan WL, Lenoir G, Divry P 1984 Defective succinic semialdehyde dehydrogenase activity in 4-hydroxybutyric aciduria. Eur. J. Pediatr. 142: 257-259.
Gillon JS, Yakir D 2000 Naturally low carbonic anhydrase activity in C4 and C3 plants limits discrimination against C18OO during photosynthesis. Plant Cell Environ. 23: 903-915.
Glackin CA, Grula JW 1990 Organ-specific transcripts of different size and abundance derive from the same pyruvate, orthophosphate dikinase gene in maize. Proc. Natl. Acad. Sci. U.S.A. 87: 3004-3008.
Glawischnig E, Gierl A, Tomas A, Bacher A, Eisenreich W 2002 Starch biosynthesis and intermediary metabolism in maize kernels. Quantitative analysis of metabolite flux by nuclear magnetic resonance. Plant Physiol. 130: 1717-1727.
Glenn EP, Watson MC, O'Leary JW, Axelson RD 1992 Comparison of salt tolerance and osmotic adjustment of low-sodium and high-sodium subspecies of the C4 halophyte, Atriplex canescens. Plant Cell Environ. 15: 711-718.
Gobert A, Park G, Amtmann A, Sanders D, Maathuis FJ 2006 Arabidopsis thaliana cyclic nucleotide gated channel 3 forms a non-selective ion transporter involved in germination and cation transport. J. Exp. Bot. 57: 791-800.
Gonzalez E, Danehower D, Daub ME 2007 Vitamer levels, stress response, enzyme activity and gene regulation of Arabidopsis lines mutant in the pyridoxine/pyridoxamine 5'-phosphate oxidase (PDX3) and the pyridoxal kinase (SOS4) genes involved in the vitamin B6 salvage pathway. Plant Physiol. Sep 14 [Epub ahead of print].
Gonzalez MC, Sanchez R, Cejudo FJ 2003 Abiotic stresses affecting water balance induce phosphoenolpyruvate carboxylase expression in roots of wheat seedlings. Planta 216: 985-992.
Gonzalez-Moro B, Mena-Petite A, Lacuesta M, Gonzalez-Murua C, Munoz-Rueda A 2000 Glutamine synthetase from mesophyll and bundle sheath maize cells: isoenzyme complements and different sensitivities to phosphinothricin. Plant Cell Rep. 19: 1127-1134.
Gonzalez-Moro MB, Loureiro-Beldarrain I, Estavillo JM, Dunabeitia MK, Munoz-Rueda A, Gonzalez-Murua C 2003 Effect of photorespiratory C2 acids on CO2 assimilation, PSII photochemistry and the xanthophyll cycle in maize. Photosynth. Res. 78: 161-173.
Gonzalez-Segura L, Velasco-Garcia R, Rudino-Pinera E, Mujica-Jimenez C, Munoz-Clares RA 2005 Site-directed mutagenesis and homology modeling indicate an important role of cysteine 439 in the stability of betaine aldehyde dehydrogenase from Pseudomonas aeruginosa. Biochimie 87: 1056-1064.
Gowik U, Burscheidt J, Akyildiz M, Schlue U, Koczor M, Streubel M, Westhoff P 2004 cis-Regulatory elements for mesophyll-specific gene expression in the C4 plant Flaveria trinervia, the promoter of the C4 phosphoenolpyruvate carboxylase gene. Plant Cell 16: 1077-1090.
Gowik U, Engelmann S, Blasing OE, Raghavendra AS, Westhoff P 2006 Evolution of C4 phosphoenolpyruvate carboxylase in the genus Alternanthera: gene families and the enzymatic characteristics of the C(4) isozyme and its orthologues in C(3) and C(3)/C(4) Alternantheras. Planta 223: 359-368.
Graf S, Nielsen FG, Kurtz S, Huynen MA, Birney E, Stunnenberg H, Flicek P 2007 Optimized design and assessment of whole genome tiling arrays. Bioinformatics 23: i195-i204.
Grodzinski B, Jiao J, Leonardos ED 1998 Estimating photosynthesis and concurrent export rates in C3 and C4 species at ambient and elevated CO2. Plant Physiol. 117: 207-215.
Grossman AR, Croft M, Gladyshev VN, Merchant SS, Posewitz MC, Prochnik S, Spalding MH 2007 Novel metabolism in Chlamydomonas through the lens of genomics. Curr. Opin. Plant Biol. 10: 190-198.
Gruetter R, Seaquist ER, Ugurbil K 2001 A mathematical model of compartmentalized neurotransmitter metabolism in the human brain. Am. J. Physiol. Endocrinol. Metab. 281: E100-E112.
Gulias J, Flexas J, Mus M, Cifre J, Lefi E, Medrano H 2003 Relationship between maximum leaf photosynthesis, nitrogen content and specific leaf area in Balearic endemic and non-endemic Mediterranean species. Ann. Bot. (Lond.) 92: 215-222.
Gutierrez-Marcos JF, Dal Pra M, Giulini A, Costa LM, Gavazzi G, Cordelier S, Sellam O, Tatout C, Paul W, Perez P, Dickinson HG, Consonni G 2007 empty pericarp4 encodes a mitochondrion-targeted pentatricopeptide repeat protein necessary for seed development and plant growth in maize. Plant Cell 19: 196-210.
Hall LN, Rossini L, Cribb L, Langdale JA 1998 GOLDEN 2: a novel transcriptional regulator of cellular differentiation in the maize leaf. Plant Cell 10: 925-936.
Hanba YT, Moriya A, Kimura K 2004 Effect of leaf surface wetness and wettability on photosynthesis in bean and pea. Plant Cell Environ. 27: 413-421.
Hansch R, Kurz T, Schulze J, Mendel RR, Cerff R, Hehl R 2003 Anaerobic induction of the maize GapC4 promoter in poplar leaves requires light and high CO2. Planta 218: 79-86.
Hansch R, Mendel RR, Cerff R, Hehl R 2003 Light-dependent anaerobic induction of the maize glyceraldehyde-3-phosphate dehydrogenase 4 (GapC4) promoter in Arabidopsis thaliana and Nicotiana tabacum. Ann. Bot. (Lond.) 91: 149-154.
Harada H, Nakajima K, Sakaue K, Matsuda Y 2006 CO2 sensing at ocean surface mediated by cAMP in a marine diatom. Plant Physiol. 142: 1318-1328.
Harris LM, Desai RP, Welker NE, Papoutsakis ET 2000 Characterization of recombinant strains of the Clostridium acetobutylicum butyrate kinase inactivation mutant: need for new phenomenological models for solventogenesis and butanol inhibition? Biotechnol. Bioeng. 67: 1-11.
Hassel B, Johannessen CU, Sonnewald U, Fonnum F 1998 Quantification of the GABA shunt and the importance of the GABA shunt versus the 2-oxoglutarate dehydrogenase pathway in GABAergic neurons. J. Neurochem. 71: 1511-1518.
Hatch MD 1992 C4 photosynthesis: an unlikely process full of surprises. Plant Cell Physiol. 33: 333-342.
Hatch MD 1997 Resolving C4 photosynthesis: Trials, tribulations and other unpublished stories. Aust. J. Plant Physiol. 24: 413-422.
Hatch MD 1992 C4 photosynthesis: evolution, key features, function, advantages. Photosynth. Res. 34: 81-81.
Hatch MD 1992 I cant believe my luck. Photosynth. Res. 33: 1-14.
Hatch MD 1987 C4 photosynthesis: a unique blend of modified biochemistry, anatomy and ultrastructure. Biochim. Biophys. Acta 895: 81-106.
Hatch MD 1982 Properties and regulation of adenylate kinase from Zea mays leaf operating in C4 pathway photosynthesis. Aust. J. Plant Physiol. 9: 287-296.
Hatch MD 1981 Regulation of pyruvate, Pi-dikinase involved in C4 photosynthesis. Indian J. Biochem. Biophys. 18: 17-18.
Hatch MD 1979 Regulation of C4 photosynthesis: factors affecting cold-mediated inactivation and reactivation of pyruvate, Pi-dikinase. Aust. J. Plant Physiol. 6: 607-619.
Hatch MD 1979 Mechanism of C4 photosynthesis in Chloris gayana: pool sizes and kinetics of CO2-C-14 incorporation into 4-carbon and 3-carbon intermediates. Arch. Biochem. Biophys. 194: 117-127.
Hatch MD 1977 C4 pathway photosynthesis: mechanism and physiological function. Trends Biochem. Sci. 2: 199-202.
Hatch MD, Agostino A 1992 Bilevel disulfide group reduction in the activation of C4 leaf nicotinamide adenine dinucleotide phosphate-malate dehydrogenase. Plant Physiol. 100: 360-366.
Hatch MD, Agostino A, Burnell JN 1988 Photosynthesis in phosphoenolpyruvate carboxykinase-type C4 plants: activity and role of mitochondria in bundle sheath cells. Arch. Biochem. Biophys. 261: 357-367.
Hatch MD, Agostino A, Jenkins CLD 1995 Measurement of the leakage of CO2 from bundle-sheath cells of leaves during C4 photosynthesis. Plant Physiol. 108: 173-181.
Hatch MD, Burnell JN 1990 Carbonic anhydrase activity in leaves and its role in the first step of C4 photosynthesis. Plant Physiol. 93: 825-828.
Hatch MD, Burnell JN 1983 Regulation of C4 photosynthesis: stability and other characteristics of the ADP/ATP-dependent inactivation of pyruvate, Pi-dikinase in maize chloroplast extracts. Aust. J. Plant Physiol. 10: 179-186.
Hatch MD, Mau SL 1977 Properties of phosphoenolpyruvate carboxykinase operative in C4 pathway photosynthesis. Aust. J. Plant Physiol. 4: 207-216.
Hatch MD, Mau SL 1977 Association of NADP-linked and NAD-linked malic enzyme activities in Zea mays: relation to C4 pathway photosynthesis. Arch. Biochem. Biophys. 179: 361-369.
Hatch MD, Oliver IR 1978 Activation and inactivation of phosphoenolpyruvate carboxylase in leaf extracts from C4 species. Aust. J. Plant Physiol. 5: 571-580.
Hatch MD, Tsuzuki M, Edwards GE 1982 Determination of NAD-malic enzyme in leaves of C4 plants: effects of malate dehydrogenase and other factors. Plant Physiol. 69: 483-491.
Hausler RE, Hirsch HJ, Kreuzaler F, Peterhansel C 2002 Overexpression of C4-cycle enzymes in transgenic C3 plants: a biotechnological approach to improve C3 photosynthesis. J. Exp. Bot. 53: 591-607.
Hausler RE, Rademacher T, Li J, Lipka V, Fischer KL, Schubert S, Kreuzaler F, Hirsch HJ 2001 Single and double overexpression of C4-cycle genes had differential effects on the pattern of endogenous enzymes, attenuation of photorespiration and on contents of UV protectants in transgenic potato and tobacco plants. J. Exp. Bot. 52: 1785-1803.
Hausler RE, Schlieben NH, Nicolay P, Fischer K, Fischer KL, Flugge UI 2000 Control of carbon partitioning and photosynthesis by the triose phosphate/phosphate translocator in transgenic tobacco plants (Nicotiana tabacumL.). I. Comparative · Planta 210: 371-382.
He DX, Edwards GE 1996 Estimation of diffusive resistance of bundle sheath cells to CO2 from modeling of C-4 photosynthesis. Photosynth. Res. 49: 195-208.
He XM, Liu HW 2002 Formation of unusual sugars: mechanistic studies and biosynthetic applications. Annu. Rev. Biochem. 71: 701-754.
He Y, Fukushige H, Hildebrand DF, Gan S 2002 Evidence supporting a role of jasmonic acid in Arabidopsis leaf senescence. Plant Physiol. 128: 876-884.
He Z, Toney MD 2006 Direct detection and kinetic analysis of covalent intermediate formation in the 4-amino-4-deoxychorismate synthase catalyzed reaction. Biochemistry 45: 5019-5028.
Hegedus D, Yu M, Baldwin D, Gruber M, Sharpe A, Parkin I, Whitwill S, Lydiate D 2003 Molecular characterization of Brassica napus NAC domain transcriptional activators induced in response to biotic and abiotic stress. Plant Mol. Biol. 53: 383-397.
Hemm MR, Herrmann KM, Chapple C 2001 AtMYB4: a transcription factor general in the battle against UV. Trends Plant Sci. 6: 135-136.
Henderson SA, von Caemmerer S, Farquhar GD 1992 Short-term measurement of carbon isotope discrimination in several C4 species. Aust. J. Plant Physiol. 19: 263-285.
Henz SR, Cumbie JS, Kasschau KD, Lohmann JU, Carrington JC, Weigel D, Schmid M 2007 Distinct expression patterns of natural antisense transcripts in Arabidopsis. Plant Physiol. 144: 1247-1255.
Herman EM, Rotter K, Premakumar R, Elwinger G, Bae R, Ehler-King L, Chen S, Livingston DP 3rd 2007 Additional freeze hardiness in wheat acquired by exposure to -3 {degrees}C is associated with extensive physiological, morphological, and molecular changes. J. Exp. Bot. 58: 1557.
Hernandez-Blanco C, Feng DX, Hu J, Sanchez-Vallet A, Deslandes L, Llorente F, Berrocal-Lobo M, Keller H, Barlet X, Sanchez-Rodriguez C, Anderson LK, Somerville S, Marco Y, Molina A 2007 Impairment of cellulose synthases required for Arabidopsis secondary cell wall formation enhances disease resistance. Plant Cell 19: 890-903.
Hersh BM, Farooq FT, Barstad DN, Blankenhorn DL, Slonczewski JL 1996 A glutamate-dependent acid resistance gene in Escherichia coli. J. Bacteriol. 178: 3978-3981.
Hidalgo O, Garcia-Jacas N, Garnatje T, Susanna A 2006 Phylogeny of Rhaponticum (Asteraceae, Cardueae-Centaureinae) and related genera inferred from nuclear and chloroplast DNA sequence data: taxonomic and biogeographic implications. Ann. Bot. (Lond.) 97: 705-714.
Hidema J, Taguchi T, Ono T, Teranishi M, Yamamoto K, Kumagai T 2007 Increase in CPD photolyase activity functions effectively to prevent growth inhibition caused by UVB radiation. Plant J. 50: 70-79.
Hioki Y, Ogasahara K, Lee SJ, Ma J, Ishida M, Yamagata Y, Matsuura Y, Ota M, Ikeguchi M, Kuramitsu S, Yutani K 2004 The crystal structure of the tryptophan synthase beta subunit from the hyperthermophile Pyrococcus furiosus. Investigation of stabilization factors. Eur. J. Biochem. 271: 2624-2635.
Hirel B, Lavergne D, McNally SF, Gadal P 1983 Some regulatory properties of glutamine synthetase isoforms in a C4 plant: Pennisetum americanum (L.) Leeke. Plant Sci. Lett. 32: 169-175.
Hirel B, Layzell DB, McCashin B, McNally SF, Canvin DT 1983 Isoforms of glutamine synthetase in Panicum species having C3, C4, and intermediate photosynthetic pathways. Can. J. Bot. 61: 2257-2259.
Hirel B, Martin A, Terce-Laforgue T, Gonzalez-Moro MB, Estavillo JM 2005 Physiology of maize I: A comprehensive and integrated view of nitrogen metabolism in a C4 plant. Physiol. Plant. 124: 167-177.
Hjersted JL, Henson MA, Mahadevan R 2007 Genome-scale analysis of Saccharomyces cerevisiae metabolism and ethanol production in fed-batch culture. Biotechnol. Bioeng. 97: 1190-1204.
Ho LH, Giraud E, Lister R, Thirkettle-Watts D, Low J, Clifton R, Howell KA, Carrie C, Donald T, Whelan J 2007 Characterization of the regulatory and expression context of an alternative oxidase gene provides insights into cyanide-insensitive respiration during growth and development. Plant Physiol. 143: 1519-1533.
Hofius D, Hajirezaei MR, Geiger M, Tschiersch H, Melzer M, Sonnewald U 2004 RNAi-mediated tocopherol deficiency impairs photoassimilate export in transgenic potato plants. Plant Physiol. 135: 1256-1268.
Hofmann J, Wieczorek K, Blochl A, Grundler FM 2007 Sucrose supply to nematode-induced syncytia depends on the apoplasmic and symplasmic pathways. J. Exp. Bot. 58: 1591-1601.
Holaday AS, Martindale W, Alred R, Brooks AL, Leegood RC 1992 Changes in activities of enzymes of carbon metabolism in leaves during exposure of plants to low temperature. Plant Physiol. 98: 1105-1114.
Holmberg N, Harker M, Wallace AD, Clayton JC, Gibbard CL, Safford R 2003 Co-expression of N-terminal truncated 3-hydroxy-3-methylglutaryl CoA reductase and C24-sterol methyltransferase type 1 in transgenic tobacco enhances carbon flux towards end-product sterols. Plant J. 36: 12-20.
Hong SH, Park SJ, Moon SY, Park JP, Lee SY 2003 In silico prediction and validation of the importance of the Entner-Doudoroff pathway in poly(3-hydroxybutyrate) production by metabolically engineered Escherichia coli. Biotechnol. Bioeng. 83: 854-863.
Hooker TS, Lam P, Zheng H, Kunst L 2007 A core subunit of the RNA-processing/degrading exosome specifically influences cuticular wax biosynthesis in Arabidopsis. Plant Cell 19: 904-913.
Hoon Yang T, Wittmann C, Heinzle E 2006 Respirometric (13)C flux analysis. Part II: in vivo flux estimation of lysine-producing Corynebacterium glutamicum. Metab. Eng. 8: 432-446.
Howard JB, Rees DC 2006 How many metals does it take to fix N2? A mechanistic overview of biological nitrogen fixation. Proc. Natl. Acad. Sci. U.S.A. 103: 17088-17093.
Hsieh K, Huang AH 2007 Tapetosomes in Brassica tapetum accumulate endoplasmic reticulum-derived flavonoids and alkanes for delivery to the pollen surface. Plant Cell 19: 582-596.
Hu WW, Gong HB, Pua EC 2005 Identification of stress-induced mitochondrial proteins in cultured tobacco cells. Physiol. Plant. 124: 25-40.
Huang EJ, Reichardt LF 2003 Trk receptors: roles in neuronal signal transduction. Annu. Rev. Biochem. 72: 609-642.
Hughes EH, Hong SB, Gibson SI, Shanks JV, San KY 2004 Expression of a feedback-resistant anthranilate synthase in Catharanthus roseus hairy roots provides evidence for tight regulation of terpenoid indole alkaloid levels. Biotechnol. Bioeng. 86: 718-727.
Hunt R, Colasanti RL 2007 Self-assembling plants and integration across ecological scales. Ann. Bot. (Lond.) 99: 1023-1034.
Huxman TE, Monson RK 2003 Stomatal responses of C-3, C-3-C-4 and C-4 Flaveria species to light and intercellular CO2 concentration: implications for the evolution of stomatal behaviour. Plant Cell Environ. 26: 313-322.
Iglesias AA, Plaxton WC, Podesta FE 1993 The role of inorganic phosphate in the regulation of C4 photosynthesis. Photosynth. Res. 35: 205-211.
Imaizumi N, Ku MS, Ishihara K, Samejima M, Kaneko S, Matsuoka M 1997 Characterization of the gene for pyruvate, orthophosphate dikinase from rice, a C3 plant, and a comparison of structure and expression between C3 and C4 genes for this protein. Plant Mol. Biol. 34: 701-716.
Inomata M, Hirai N, Takeda N, Ohigashi H 2005 Mechanism of the formation of a dehydrated ion by an unusual loss of oxygen at the 4'-carbonyl group of abscisic acid methyl ester in electron ionization mass spectrometry. J. Mass Spectrom. 40: 1035-1043.
Inoue F, Terada N, Nakajima H, Okochi M, Kodo N, Kizaki Z, Kinugasa A, Sawada T 1999 Effect of sports activity on carnitine metabolism. Measurement of free carnitine, gamma-butyrobetaine and acylcarnitines by tandem mass spectrometry. J. Chromatogr. B. Biomed. Sci. Appl. 731: 83-88.
Ishijima J, Nakai T, Kawaguchi S, Hirotsu K, Kuramitsu S 2000 Free energy requirement for domain movement of an enzyme. J. Biol. Chem. 275: 18939-18945.
Iwano M, Shiba H, Matoba K, Miwa T, Funato M, Entani T, Nakayama P, Shimosato H, Takaoka A, Isogai A, Takayama S 2007 Actin dynamics in papilla cells of Brassica rapa during self- and cross-pollination. Plant Physiol. 144: 72-81.
Jakobsson PJ, Mancini JA, Riendeau D, Ford-Hutchinson AW 1997 Identification and characterization of a novel microsomal enzyme with glutathione-dependent transferase and peroxidase activities. J. Biol. Chem. 272: 22934-22939.
Jeanneau M, Vidal J, Gousset-Dupont A, Lebouteiller B, Hodges M, Gerentes D, Perez P 2002 Manipulating PEPC levels in plants. J. Exp. Bot. 53: 1837-1845.
Jelesko JG, Lara JC, Leigh JA 1993 Rhizobium meliloti mutants with decreased DAHP synthase activity are sensitive to exogenous tryptophan and phenylalanine and form ineffective nodules. Mol. Plant Microbe Interact. 6: 135-143.
Jenkins BD, Zehr JP, Gibson A, Campbell L 2006 Cyanobacterial assimilatory nitrate reductase gene diversity in coastal and oligotrophic marine environments. Environ. Microbiol. 8: 2083-2095.
Jenkins CLD, Burnell JN, Hatch MD 1987 Form of inorganic carbon involved as a product and as an inhibitor of C4 acid decarboxylases operating in C4 photosynthesis. Plant Physiol. 85: 952-957.
Jenkins CLD, Furbank RT, Hatch MD 1989 Inorganic carbon diffusion between C4 mesophyll and bundle sheath cells: direct bundle sheath CO2 assimilation in intact leaves in the presence of an inhibitor of the C4 pathway. Plant Physiol. 91: 1356-1363.
Jenkins CLD, Furbank RT, Hatch MD 1989 Mechanism of C4 photosynthesis: a model describing the inorganic carbon pool in bundle sheath cells. Plant Physiol. 91: 1372-1381.
Jenkins CLD, Hatch MD 1985 Properties and reaction mechanism of C4 leaf pyruvate, Pi-dikinase. Arch. Biochem. Biophys. 239: 53-62.
Jenkins CLD, Russ VJ 1984 Large scale, rapid preparation of functional mesophyll chloroplasts from Zea mays and other C4 species. Plant Sci. Lett. 35: 19-24.
Jeong YM, Mun JH, Kim H, Lee SY, Kim SG 2007 An upstream region in the first intron of petunia actin-depolymerizing factor 1 affects tissue-specific expression in transgenic Arabidopsis (Arabidopsis thaliana). Plant J. 50: 230-239.
Jhee KH, Yoshimura T, Miles EW, Takeda S, Miyahara I, Hirotsu K, Soda K, Kawata Y, Esaki N 2000 Stereochemistry of the transamination reaction catalyzed by aminodeoxychorismate lyase from Escherichia coli: close relationship between fold type and stereochemistry. J. Biochem. (Tokyo) 128: 679-686.
Jiao D, Huang X, Li X, Chi W, Kuang T, Zhang Q, Ku MS, Cho D 2002 Photosynthetic characteristics and tolerance to photo-oxidation of transgenic rice expressing C(4) photosynthesis enzymes. Photosynth. Res. 72: 85-93.
Jiao JA, Chollet R 1990 Regulatory phosphorylation of serine-15 in maize phosphoenolpyruvate carboxylase by a C4-leaf protein-serine kinase. Arch. Biochem. Biophys. 283: 300-305.
Jiao JA, Chollet R 1989 Regulatory seryl-phosphorylation of C4 phosphoenolpyruvate carboxylase by a soluble protein kinase from maize leaves. Arch. Biochem. Biophys. 269: 526-535.
Jiao JA, Chollet R 1991 Posttranslational regulation of phosphoenolpyruvate carboxylase in C4 and Crassulacean acid metabolism plants. Plant Physiol. 95: 981-985.
Jiao JA, Chollet R 1992 Light activation of maize phosphoenolpyruvate carboxylase protein serine kinase activity is inhibited by mesophyll and bundle-sheath-directed photosynthesis inhibitors. Plant Physiol. 98: 152-156.
Jiao JA, Echevarria C, Vidal J, Chollet R 1991 Protein turnover as a component in the light dark regulation of phosphoenolpyruvate carboxylase protein serine kinase activity in C4 plants. Proc. Natl. Acad. Sci. U.S.A. 88: 2712-2715.
Jiao JA, Podesta FE, Chollet R, OLeary MH, Andreo CS 1990 Isolation and sequence of an active site peptide from maize leaf phosphoenolpyruvate carboxylase inactivated by pyridoxal 5'-phosphate. Biochim. Biophys. Acta 1041: 291-295.
Jiao JA, Vidal J, Echevarria C, Chollet R 1991 In vivo regulatory phosphorylation site in C4-leaf phosphoenolpyruvate carboxylase from maize and sorghum. Plant Physiol. 96: 297-301.
Joet T, Cournac L, Peltier G, Havaux M 2002 Cyclic electron flow around photosystem I in C(3) plants. In vivo control by the redox state of chloroplasts and involvement of the NADH-dehydrogenase complex. Plant Physiol. 128: 760-769.
Kagawa T, Hatch MD 1977 Regulation of C4 photosynthesis: characterization of a protein factor mediating activation and inactivation of NADP-malate dehydrogenase. Arch. Biochem. Biophys. 184: 290-297.
Kaibuchi K, Kuroda S, Amano M 1999 Regulation of the cytoskeleton and cell adhesion by the Rho family GTPases in mammalian cells. Annu. Rev. Biochem. 68: 459-486.
Kalamajka R, Hahnen S, Cavalar M, Topsch S, Weier D, Peterhansel C 2003 Restriction accessibility in isolated nuclei reveals light-induced chromatin reorganization at the PEPC promoter in maize. Plant Mol. Biol. 52: 669-678.
Kaneyasu T, Kobayashi A, Nakayama M, Fujii N, Takahashi H, Miyazawa Y 2007 Auxin response, but not its polar transport, plays a role in hydrotropism of Arabidopsis roots. J. Exp. Bot. 58: 1143-1150.
Kang JH, Wang L, Giri A, Baldwin IT 2006 Silencing threonine deaminase and JAR4 in Nicotiana attenuata impairs jasmonic acid-isoleucine-mediated defenses against Manduca sexta. Plant Cell 18: 3303-3320.
Karlova R, Boeren S, Russinova E, Aker J, Vervoort J, de Vries S 2006 The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE1 protein complex includes BRASSINOSTEROID-INSENSITIVE1. Plant Cell 18: 626-638.
Kato A, Hayashi M, Nishimura M 1999 Oligomeric proteins containing N-terminal targeting signals are imported into peroxisomes in transgenic Arabidopsis. Plant Cell Physiol. 40: 586-591.
Katz J, Wals P, Lee WNP 1993 Isotopomer studies of gluconeogenesis and the Krebs cycle with 13C-labeled lactate. J. Biol. Chem. 268: 25509-25521.
Kausch AP, Owen TP Jr, Zachwieja SJ, Flynn AR, Sheen J 2001 Mesophyll-specific, light and metabolic regulation of the C4 PPCZm1 promoter in transgenic maize. Plant Mol. Biol. 45: 1-15.
Kawamura T, Shigesada K, Toh H, Okumura S, Yanagisawa S, Izui K 1992 Molecular evolution of phosphoenolpyruvate carboxylase for C4 photosynthesis in maize: comparison of its cDNA sequence with a newly isolated cDNA encoding an isozyme involved in the anaplerotic function. J. Biochem. (Tokyo) 112: 147-154.
Khristoforov RR, Sukhareva BS, Dixon HB, Sparkes MJ, Krasnov VP, Bukrina IM 1995 The interaction of glutamate decarboxylase from Escherichia coli with substrate analogues modified at C-3 and C-4. Biochem. Mol. Biol. Int. 36: 77-85.
Kiirats O, Lea PJ, Franceschi VR, Edwards GE 2002 Bundle sheath diffusive resistance to CO2 and effectiveness of C(4) photosynthesis and refixation of photorespired CO(2) in a C(4) cycle mutant and wild-type Amaranthus edulis. Plant Physiol. 130: 964-976.
Kilian J, Whitehead D, Horak J, Wanke D, Weinl S, Batistic O, D'Angelo C, Bornberg-Bauer E, Kudla J, Harter K 2007 The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. Plant J. 50: 347-363.
Kim EJ, Sampathkumar SG, Jones MB, Rhee JK, Baskaran G, Goon S, Yarema KJ 2004 Characterization of the metabolic flux and apoptotic effects of O-hydroxyl- and N-acyl-modified N-acetylmannosamine analogs in Jurkat cells. J. Biol. Chem. 279: 18342-18352.
Kim K, Portis AR Jr 2005 Temperature dependence of photosynthesis in Arabidopsis plants with modifications in Rubisco activase and membrane fluidity. Plant Cell Physiol. 46: 522-530.
Kim YH, Lim S, Han SH, Lee JC, Song WK, Bang JW, Kwon SY, Lee HS, Kwak SS 2007 Differential expression of 10 sweetpotato peroxidases in response to sulfur dioxide, ozone, and ultraviolet radiation. Plant Physiol. Biochem. Jul 31 [Epub ahead of print].
King A, Nam JW, Han J, Hilliard J, Jaworski JG 2007 Cuticular wax biosynthesis in petunia petals: cloning and characterization of an alcohol-acyltransferase that synthesizes wax-esters. Planta 226: 381-394.
Klahre U, Kost B 2006 Tobacco RhoGTPase ACTIVATING PROTEIN1 spatially restricts signaling of RAC/Rop to the apex of pollen tubes. Plant Cell 18: 3033-3046.
Klipp E, Nordlander B, Kruger R, Gennemark P, Hohmann S 2005 Integrative model of the response of yeast to osmotic shock. Nature Biotechnol. 23: 975-982.
Kobayashi M, Rodriguez R, Lara C, Omata T 1997 Involvement of the C-terminal domain of an ATP-binding subunit in the regulation of the ABC-type nitrate/nitrite transporter of the Cyanobacterium synechococcus sp. strain PCC 7942. J. Biol. Chem. 272: 27197-27201.
Kocacinar F, Sage RF 2003 Photosynthetic pathway alters xylem structure and hydraulic function in herbaceous plants. Plant Cell Environ. 26: 2015-2026.
Kohler U, Liaud MF, Mendel RR, Cerff R, Hehl R 1995 The maize GapC4 promoter confers anaerobic reporter gene expression and shows homology to the maize anthocyanin regulatory locus C1. Plant Mol. Biol. 29: 1293-1298.
Komoto J, Yamada T, Takata Y, Markham GD, Takusagawa F 2004 Crystal structure of the S-adenosylmethionine synthetase ternary complex: a novel catalytic mechanism of S-adenosylmethionine synthesis from ATP and Met. Biochemistry 43: 1821-1831.
Koopmann E, Logemann E, Hahlbrock K 1999 Regulation and functional expression of cinnamate 4-hydroxylase from parsley. Plant Physiol. 119: 49-56.
Kopriva S 2006 Regulation of sulfate assimilation in Arabidopsis and beyond. Ann. Bot. (Lond.) 97: 479-495.
Koprivova A, Melzer M, von Ballmoos P, Mandel T, Brunold C, Kopriva S 2001 Assimilatory sulfate reduction in C3, C3-C4, and C4 species of Flaveria. Plant Physiol. 127: 543-550.
Kovacheva S, Bedard J, Patel R, Dudley P, Twell D, Rios G, Koncz C, Jarvis P 2005 In vivo studies on the roles of Tic110, Tic40 and Hsp93 during chloroplast protein import. Plant J. 41: 412-428.
Kovacheva S, Bedard J, Wardle A, Patel R, Jarvis P 2007 Further in vivo studies on the role of the molecular chaperone, Hsp93, in plastid protein import. Plant J. 50: 364-379.
Krall JP, Edwards GE 1993 PEP carboxylases from two C4 species of Panicum with markedly different susceptibilities to cold inactivation. Plant Cell Physiol. 34: 1-11.
Krall JP, Pearcy RW 1993 Concurrent measurements of oxygen and carbon dioxide exchange during lightflecks in maize (Zea mays L.). Plant Physiol. 103: 823-828.
Krinke O, Ruelland E, Valentova O, Vergnolle C, Renou JP, Taconnat L, Flemr M, Burketova L, Zachowski A 2007 Phosphatidylinositol 4-kinase activation is an early response to salicylic acid in Arabidopsis suspension cells. Plant Physiol. 144: 1347-1359.
Kroumova AB, Xie Z, Wagner GJ 1994 A pathway for the biosynthesis of straight and branched, odd- and even-length, medium-chain fatty acids in plants. Proc. Natl. Acad. Sci. U.S.A. 91: 11437-11441.
Ku MS, Kano-Murakami Y, Matsuoka M 1996 Evolution and expression of C4 photosynthesis genes. Plant Physiol. 111: 949-957.
Kubien DS, Sage RF 2004 Low-temperature photosynthetic performance of a C-4 grass and a co-occurring C-3 grass native to high latitudes. Plant Cell Environ. 27: 907-916.
Kubien DS, Sage RF 2004 Dynamic photo-inhibition and carbon gain in a C-4 and a C-3 grass native to high latitudes. Plant Cell Environ. 27: 1424-1435.
Kubien DS, Von Caemmerer S, Furbank RT, Sage RF 2003 C4 photosynthesis at low temperature. A study using transgenic plants with reduced amounts of Rubisco. Plant Physiol. 132: 1577-1585.
Kyparissis A, Grammatikopoulos G, Manetas Y 2007 Leaf morphological and physiological adjustments to the spectrally selective shade imposed by anthocyanins in Prunus cerasifera. Tree Physiol. 27: 849-857.
Lai C, Kunst L, Jetter R 2007 Composition of alkyl esters in the cuticular wax on inflorescence stems of Arabidopsis thaliana cer mutants. Plant J. 50: 189-196.
Lai LB, Tausta SL, Nelson TM 2002 Differential regulation of transcripts encoding cytosolic NADP-malic enzyme in C3 and C4 Flaveria species. Plant Physiol. 128: 140-149.
Lai LB, Wang L, Nelson TM 2002 Distinct but conserved functions for two chloroplastic NADP-malic enzyme isoforms in C3 and C4 Flaveria species. Plant Physiol. 128: 125-139.
Lamb JC, Yu W, Han F, Birchler JA 2007 Plant chromosomes from end to end: telomeres, heterochromatin and centromeres. Curr. Opin. Plant Biol. 10: 116-122.
Lange BM, Ghassemian M 2003 Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. Plant Mol. Biol. 51: 925-948.
Langhans M, Ratajczak R, Lutzelschwab M, Michalke W, Wachter R, Fischer-Schliebs E, Ullrich CI 2001 Immunolocalization of plasma-membrane H+-ATPase and tonoplast-type pyrophosphatase in the plasma membrane of the sieve element-companion cell complex in the stem of Ricinus communis L. Planta 213: 11-19.
Lara MV, Choung SD, Akhani H, Andreo CS, Edwards GE 2006 Species having C4 single-cell-type photosynthesis in the Chenopodiaceae family evolved a photosynthetic phosphoenolpyruvate carboxylase like that of Kranz-type C4 species. Plant Physiol. 142: 673-684.
Large PJ 1992 Enzymes and pathways of polyamine breakdown in microorganisms. FEMS Microbiol. Rev. 88: 249-262.
Larson TR, Graham IA 2001 A novel technique for the sensitive quantification of acyl CoA esters from plant tissues. Plant J. 25: 115-125.
Larsson MC, Stensmyr MC, Bice SB, Hansson BS 2003 Attractiveness of fruit and flower odorants detected by olfactory receptor neurons in the fruit chafer Pachnoda marginata. J. Chem. Ecol. 29: 1253-1268.
Lattanzi FA, Schnyder H, Thornton B 2005 The sources of carbon and nitrogen supplying leaf growth. Assessment of the role of stores with compartmental models. Plant Physiol. 137: 383-395.
Lattanzi FA, Schnyder H, Thornton B 2004 Defoliation effects on carbon and nitrogen substrate import and tissue-bound efflux in leaf growth zones of grasses. Plant Cell Environ. 27: 347-356.
Lawson T, Oxborough K, Morison JI, Baker NR 2003 The responses of guard and mesophyll cell photosynthesis to CO2, O2, light, and water stress in a range of species are similar. J. Exp. Bot. 54: 1743-1752.
Lea PJ, Chen ZH, Leegood RC, Walker RP 2001 Does phosphoenolpyruvate carboxykinase have a role in both amino acid and carbohydrate metabolism? Amino Acids 20: 225-241.
Lee PC, Petri R, Mijts BN, Watts KT, Schmidt-Dannert C 2005 Directed evolution of Escherichia coli farnesyl diphosphate synthase (IspA) reveals novel structural determinants of chain length specificity. Metab. Eng. 7: 18-26.
Lee SJ, Ogasahara K, Ma J, Nishio K, Ishida M, Yamagata Y, Tsukihara T, Yutani K 2005 Conformational changes in the tryptophan synthase from a hyperthermophile upon alpha2beta2 complex formation: crystal structure of the complex. Biochemistry 44: 11417-11427.
Leegood RC 1997 The regulation of C4 photosynthesis. Adv. Bot. Res. 26: 251-316.
Leegood RC 2002 C4 photosynthesis: principles of CO2 concentration and prospects for its introduction into C3 plants. J. Exp. Bot. 53: 581-590.
Leegood RC, Adcock MD, Doncaster HD 1989 Analysis of the control of photosynthesis in C4 plants by changes in light and carbon dioxide. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 323: 339-355.
Leegood RC, von Caemmerer S 1994 Regulation of photosynthetic carbon assimilation in leaves of C3-C4 intermediate species of Moricandia and Flaveria. Planta 192: 232-238.
Leonardos ED, Grodzinski B 2000 Photosynthesis, immediate export and carbon partitioning in source leaves of C3, C3-C4 intermediate, and C4Panicum and Flaveria species at ambient and elevated CO2 levels Plant Cell Environ. 23: 839-851.
Leonardos ED, Micallef BJ, Micallef MC, Grodzinski B 2006 Diel patterns of leaf C export and of main shoot growth for Flaveria linearis with altered leaf sucrose-starch partitioning. J. Exp. Bot. 57: 801-814.
Lewsey M, Robertson FC, Canto T, Palukaitis P, Carr JP 2007 Selective targeting of miRNA-regulated plant development by a viral counter-silencing protein. Plant J. 50: 240-252.
Li B, Pacquit V, Jiao JA, Duff SMG, Maralihalli GB, Sarath G, Condon SA, Vidal J, Chollet R 1997 Structural requirements for phosphorylation of C4-leaf phosphoenolpyruvate carboxylase by its highly regulated protein-serine kinase. A comparative study with synthetic-peptide substrates and mutant target proteins. Aust. J. Plant Physiol. 24: 443-449.
Li B, Zhang XQ, Chollet R 1996 Phosphoenolpyruvate carboxylase kinase in tobacco leaves is activated by light in a similar but not identical way as in maize. Plant Physiol. 111: 497-505.
Li F, Murillo C, Wurtzel ET 2007 Maize Y9 encodes a product essential for 15-cis-zeta-carotene isomerization. Plant Physiol. 144: 1181-1189.
Li FX, Jin ZP, Zhao DX, Cheng LQ, Fu CX, Ma F 2006 Overexpression of the Saussurea medusa chalcone isomerase gene in S. involucrata hairy root cultures enhances their biosynthesis of apigenin. Phytochemistry 67: 553-560.
Li G, Xue HW 2007 Arabidopsis PLDzeta2 regulates vesicle trafficking and is required for auxin response. Plant Cell 19: 281-295.
Li L, Cheng H, Gai J, Yu D 2007 Genome-wide identification and characterization of putative cytochrome P450 genes in the model legume Medicago truncatula. Planta 226: 109-123.
Li Y, Beisson F, Ohlrogge J, Pollard M 2007 Monoacylglycerols are components of root waxes and can be produced in the aerial cuticle by ectopic expression of a suberin-associated acyltransferase. Plant Physiol. 144: 1267-1277.
Li Y, Dhankher OP, Carreira L, Lee D, Chen A, Schroeder JI, Balish RS, Meagher RB 2004 Overexpression of phytochelatin synthase in Arabidopsis leads to enhanced arsenic tolerance and cadmium hypersensitivity. Plant Cell Physiol. 45: 1787-1797.
Liang X, Abel S, Keller JA, Shen NF, Theologis A 1992 The 1-aminocyclopropane-1-carboxylate synthase gene family of Arabidopsis thaliana. Proc. Natl. Acad. Sci. U.S.A. 89: 11046-11050.
Lim LS, Shen P, Gong YH, Yong EL 2006 Dimeric progestins from rhizomes of Ligusticum chuanxiong. Phytochemistry 67: 728-74.
Lim YH, Yoshimura T, Kurokawa Y, Esaki N, Soda K 1998 Nonstereospecific transamination catalyzed by pyridoxal phosphate-dependent amino acid racemases of broad substrate specificity. J. Biol. Chem. 273: 4001-4005.
Lin SI, Wang JG, Poon SY, Su CL, Wang SS, Chiou TJ 2005 Differential regulation of FLOWERING LOCUS C expression by vernalization in cabbage and Arabidopsis. Plant Physiol. 137: 1037-1048.
Liu CZ, Cheng XY 2007 Enhancement of phenylethanoid glycosides biosynthesis in cell cultures of Cistanche deserticola by osmotic stress. Plant Cell Rep. Sep 14 [Epub ahead of print].
Liu H, Reynolds KA 2001 Precursor supply for polyketide biosynthesis: the role of crotonyl-CoA reductase. Metab. Eng. 3: 40-48.
Liu Y, Koornneef M, Soppe WJ 2007 The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy. Plant Cell 19: 433-444.
Livingstone D, Beilinson V, Kalyaeva M, Schmidt MA, Herman EM, Nielsen NC 2007 Reduction of protease inhibitor activity by expression of a mutant Bowman-Birk gene in soybean seed. Plant Mol. Biol. 64: 397-408.
Lu S, Zhou Y, Li L, Chiang VL 2006 Distinct roles of cinnamate 4-hydroxylase genes in Populus. Plant Cell Physiol. 47: 905-914.
Lu YK, Stemler AJ 2002 Extrinsic photosystem II carbonic anhydrase in maize mesophyll chloroplasts. Plant Physiol. 128: 643-649.
Lubken T, Schmidt J, Porzel A, Arnold N, Wessjohann L 2004 Hygrophorones A-G: fungicidal cyclopentenones from Hygrophorus species (Basidiomycetes). Phytochemistry 65: 1061-1071.
Lucena C, Waters BM, Romera FJ, Garcia MJ, Morales M, Alcantara E, Perez-Vicente R 2006 Ethylene could influence ferric reductase, iron transporter, and H+-ATPase gene expression by affecting FER (or FER-like) gene activity. J. Exp. Bot. 57: 4145-4154.
Ludwig M, von Caemmerer S, Dean Price G, Badger MR, Furbank RT 1998 Expression of tobacco carbonic anhydrase in the C4 dicot flaveria bidentis leads to increased leakiness of the bundle sheath and a defective CO2-concentrating mechanism. Plant Physiol. 117: 1071-1081.
Luethy MH, Gemel J, Johnston ML, Mooney BP, Miernyk JA, Randall DD 2001 Developmental expression of the mitochondrial pyruvate dehydrogenase complex in pea (Pisum sativum) seedlings. Physiol. Plant. 112: 559-566.
Lunn JE, Agostino A, Hatch MD 1995 Regulation of NADP-malate dehydrogenase in C4 plants: activity and properties of maize thioredoxin m and the significance of non-active site thiol groups. Aust. J. Plant Physiol. 22: 577-584.
Lunn JE, Furbank RT 1997 Localisation of sucrose-phosphate synthase and starch in leaves of C4 plants. Planta 202: 106-111.
Lunn JE, Furbank RT, Hatch MD 1997 Adenosine 5'-triphosphate-mediated activation of sucrose- phosphate synthase in bundle sheath cells of C4 plants. Planta 202: 249-256.
Lunn JE, Hatch MD 1997 The role of sucrose-phosphate synthase in the control of photosynthate partitioning in Zea mays leaves. Aust. J. Plant Physiol. 24: 1-8.
Lunn JE, Hatch MD 1995 Primary partitioning and storage of photosynthate in sucrose and starch in leaves of C4 plants. Planta 197: 385-391.
Luo J, Shen G, Yan J, He C, Zhang H 2006 AtCHIP functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment. Plant J. 46: 649-657.
Ma H, Zhang S, Ji L, Zhu H, Yang S, Fang X, Yang R 2006 Fine mapping and in silico isolation of the EUI1 gene controlling upper internode elongation in rice. Plant Mol. Biol. 60: 87-94.
Macdonald FD, Chou Q, Buchanan BB 1987 Ion-exchange chromatography separates activities synthesizing and degrading fructose 2,6-bisphosphate from C3 and C4 leaves but not from rat liver. Plant Physiol. 85: 13-16.
MacKintosh C, Coggins J, Cohen P 1991 Plant protein phosphatases: subcellular distribution, detection of protein phosphatase 2C and identification of protein phosphatase 2A as the major quinate dehydrogenase phosphatase. Biochem. J. 273: 733-738.
MacMillan J, Ward DA, Phillips AL, Sanchez-Beltran MJ, Gaskin P, Lange T, Hedden P 1997 Gibberellin biosynthesis from gibberellin A12-aldehyde in endosperm and embryos of Marah macrocarpus. Plant Physiol. 113: 1369-1377.
Maherali H, Johnson HB, Jackson RB 2003 Stomatal sensitivity to vapour pressure difference over a subambient to elevated CO2 gradient in a C-3/C-4 grassland. Plant Cell Environ. 26: 1297-1306.
Maherali H, Reid CD, Polley HW, Johnson HB, Jackson RB 2002 Stomatal acclimation over a subambient to elevated CO2 gradient in a C-3/C-4 grassland. Plant Cell Environ. 25: 557-566.
Mahroug S, Courdavault V, Thiersault M, St-Pierre B, Burlat V 2006 Epidermis is a pivotal site of at least four secondary metabolic pathways in Catharanthus roseus aerial organs. Planta 223: 1191-1200.
Majeran W, Cai Y, Sun Q, van Wijk KJ 2005 Functional differentiation of bundle sheath and mesophyll maize chloroplasts determined by comparative proteomics. Plant Cell 17: 3111-3140.
Majeran W, Olive J, Drapier D, Vallon O, Wollman FA 2001 The light sensitivity of ATP synthase mutants of Chlamydomonas reinhardtii. Plant Physiol. 126: 421-433.
Majumdar A, Sonawat HM 1998 A two-dimensional 1H detected 13C NMR investigation of pyruvate metabolism in Halobacterium salinarium. J. Biochem. (Tokyo) 123: 115-119.
Malashkevich VN, Jager J, Ziak M, Sauder U, Gehring H, Christen P, Jansonius JN 1995 Structural basis for the catalytic activity of aspartate aminotransferase K258H lacking the pyridoxal 5'-phosphate-binding lysine residue. Biochemistry 34: 405-414.
Malatrasi M, Close TJ, Marmiroli N 2002 Identification and mapping of a putative stress response regulator gene in barley. Plant Mol. Biol. 50: 143-152.
Malmstrom J, Lee H, Aebersold R 2007 Advances in proteomic workflows for systems biology. Curr. Opin. Biotechnol. Aug 13 [Epub ahead of print].
Mandaci S, Dobres MS 1997 A promoter directing epidermal expression in transgenic alfalfa. Plant Mol. Biol. 34: 961-965.
Manetas Y, Petropoulou Y, Karabourniotis G 1986 Compatible solutes and their effects on phosphoenolpyruvate carboxylase of C4-halophytes. Plant Cell Environ. 9: 145-151.
Manetas Y, Stamatakis K, Samaras Y 1986 Mg2+-regulation of C4 and CAM adenylate kinase. J. Plant Physiol. 124: 165-170.
Mant J, Bower CC, Weston PH, Peakall R 2005 Phylogeography of pollinator-specific sexually deceptive Chiloglottis taxa (Orchidaceae): evidence for sympatric divergence? Mol. Ecol. 14: 3067-3076.
Manuell AL, Beligni MV, Elder JH, Siefker DT, Tran M, Weber A, McDonald TL, Mayfield SP 2007 Robust expression of a bioactive mammalian protein in Chlamydomonas chloroplast. Plant Biotechnol. J. 5: 402-412.
Marin-Navarro J, Moreno J 2006 Cysteines 449 and 459 modulate the reduction-oxidation conformational changes of ribulose 1,5-bisphosphate carboxylase/oxygenase and the translocation of the enzyme to membranes during stress. Plant Cell Environ. 29: 898-908.
Markelz NH, Costich DE, Brutnell TP 2003 Photomorphogenic responses in maize seedling development. Plant Physiol. 133: 1578-1591.
Maroco JP, Ku MSB, Edwards GE 2000 Utilization of O2 in the metabolic optimization of C4 photosynthesis. Plant Cell Environ. 23: 115-121.
Maroco JP, Ku MSB, Furbank RT, Lea PJ, Leegood RC, Edwards GE 1998 CO2 and O2 dependence of PS II activity in C4 plants having genetically produced deficiencies in the C3 or C4 cycle. Photosynth. Res. 58: 91-101.
Maroco JP, Ku MSB, Lea PJ, Dever LV, Leegood RC, Furbank RT, Edwards GE 1998 Oxygen requirement and inhibition of C4 photosynthesis. An analysis of C4 plants deficient in the C3 and C4 cycles. Plant Physiol. 116: 823-832.
Marsch-Martinez N, Greco R, Becker JD, Dixit S, Bergervoet JH, Karaba A, de Folter S, Pereira A 2006 BOLITA, an Arabidopsis AP2/ERF-like transcription factor that affects cell expansion and proliferation/differentiation pathways. Plant Mol. Biol. 62: 825-843.
Marshall DM, Muhaidat R, Brown NJ, Liu Z, Stanley S, Griffiths H, Sage RF, Hibberd JM 2007 Cleome, a genus closely related to Arabidopsis, contains species spanning a developmental progression from C(3) to C(4) photosynthesis. Plant J. 51: 886-896.
Marshall JS, Stubbs JD, Taylor WC 1996 Two genes encode highly similar chloroplastic NADP-malic enzymes in Flaveria. Implications for the evolution of C4 photosynthesis. Plant Physiol. 111: 1251-1261.
Martin F, Boiffin V, Pfeffer PE 1998 Carbohydrate and amino acid metabolism in the Eucalyptus globulus-pisolithus tinctorius ectomycorrhiza during glucose utilization. Plant Physiol. 118: 627-635.
Martin F, Winspear MJ, MacFarlane JD, Oaks A 1983 Effect of methionine sulfoximine on the accumulation of ammonia in C3 and C4 leaves: The relationship between NH3 accumulation and photorespiratory activity. Plant Physiol. 71: 177-181.
Martinez JP, Kinet JM, Bajji M, Lutts S 2005 NaCl alleviates polyethylene glycol-induced water stress in the halophyte species Atriplex halimus L. J. Exp. Bot. 56: 2421-2431.
Mashego MR, van Gulik WM, Vinke JL, Visser D, Heijnen JJ 2006 In vivo kinetics with rapid perturbation experiments in Saccharomyces cerevisiae using a second-generation BioScope. Metab. Eng. 8: 370-383.
Massonneau A, Condamine P, Wisniewski JP, Zivy M, Rogowsky PM 2005 Maize cystatins respond to developmental cues, cold stress and drought. Biochim. Biophys. Acta 1729: 186-199.
Masuda HP, Ramos GB, de Almeida-Engler J, Cabral LM, Coqueiro VM, Macrini CM, Ferreira PC, Hemerly AS 2004 Genome based identification and analysis of the pre-replicative complex of Arabidopsis thaliana. FEBS Lett. 574: 192-202.
Matsumura T, Kimata-Ariga Y, Sakakibara H, Sugiyama T, Murata H, Takao T, Shimonishi Y, Hase T 1999 Complementary DNA cloning and characterization of ferredoxin localized in bundle-sheath cells of maize leaves. Plant Physiol. 119: 481-488.
Matsuoka M 1995 The gene for pyruvate, orthophosphate dikinase in C4 plants: structure, regulation and evolution. Plant Cell Physiol. 36: 937-943.
Matsuoka M 1990 Structure, genetic mapping, and expression of the gene for pyruvate, orthophosphate dikinase from maize. J. Biol. Chem. 265: 16772-16777.
Matsuoka M, Furbank RT, Fukayama H, Miyao M 2001 Molecular engineering of C4 photosynthesis. Annu. Rev. Plant Physiol. Plant Mol. Biol. 52: 297-314.
Maurino VG, Saigo M, Andreo CS, Drincovich MF 2001 Non-photosynthetic 'malic enzyme' from maize: a constituvely expressed enzyme that responds to plant defence inducers. Plant Mol. Biol. 45: 409-420.
Mazzitelli L, Hancock RD, Haupt S, Walker PG, Pont SD, McNicol J, Cardle L, Morris J, Viola R, Brennan R, Hedley PE, Taylor MA 2007 Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds. J. Exp. Bot. 58: 1035-1045.
McGonigle B, Nelson T 1995 C4 isoform of NADP-malate dehydrogenase. cDNA cloning and expression in leaves of C4, C3, and C3-C4 intermediate species of Flaveria. Plant Physiol. 108: 1119-1126.
Meister M, Agostino A, Hatch MD 1996 The roles of malate and aspartate in C4 photosynthetic metabolism of Flaveria bidentis (L). Planta 199: 262-269.
Milborrow BV 2001 The pathway of biosynthesis of abscisic acid in vascular plants: a review of the present state of knowledge of ABA biosynthesis. J. Exp. Bot. 52: 1145-1164.
Miller SS, Driscoll BT, Gregerson RG, Gantt JS, Vance CP 1998 Alfalfa malate dehydrogenase (MDH): molecular cloning and characterization of five different forms reveals a unique nodule-enhanced MDH. Plant J. 15: 173-184.
Mitra RM, Long SR 2004 Plant and bacterial symbiotic mutants define three transcriptionally distinct stages in the development of the Medicago truncatula/Sinorhizobium meliloti symbiosis. Plant Physiol. 134: 595-604.
Miyao M 2003 Molecular evolution and genetic engineering of C4 photosynthetic enzymes. J. Exp. Bot. 54: 179-189.
Mizutani M, Ohta D, Sato R 1997 Isolation of a cDNA and a genomic clone encoding cinnamate 4-hydroxylase from Arabidopsis and its expression manner in planta. Plant Physiol. 113: 755-763.
Monreal JA, Lopez-Baena FJ, Vidal J, Echevarria C, Garcia-Maurino S 2007 Effect of LiCl on phosphoenolpyruvate carboxylase kinase and the phosphorylation of phosphoenolpyruvate carboxylase in leaf disks and leaves of Sorghum vulgare. Planta 225: 801-812.
Moons A, Valcke R, Van Montagu M 1998 Low-oxygen stress and water deficit induce cytosolic pyruvate orthophosphate dikinase (PPDK) expression in roots of rice, a C3 plant. Plant J. 15: 89-98.
Mori M, Tomita C, Sugimoto K, Hasegawa M, Hayashi N, Dubouzet JG, Ochiai H, Sekimoto H, Hirochika H, Kikuchi S 2007 Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice. Plant Mol. Biol. 63: 847-860.
Morin X, Ameglio T, Ahas R, Kurz-Besson C, Lanta V, Lebourgeois F, Miglietta F, Chuine I 2007 Variation in cold hardiness and carbohydrate concentration from dormancy induction to bud burst among provenances of three European oak species. Tree Physiol. 27: 817-825.
Morishima A 1998 Identification of preferred binding sites of a light-inducible DNA-binding factor (MNF1) within 5'-upstream sequence of C4-type phosphoenolpyruvate carboxylase gene in maize. Plant Mol. Biol. 38: 633-646.
Mudd SH, Datko AH 1986 Methionine methyl-group metabolism in Lemna. Plant Physiol. 81: 103-114.
Muller J, Piffanelli P, Devoto A, Miklis M, Elliott C, Ortmann B, Schulze-Lefert P, Panstruga R 2005 Conserved ERAD-like quality control of a plant polytopic membrane protein. Plant Cell 17: 149-163.
Murata S, Kobayashi M, Matoh T, Sekiya J 1992 Sodium stimulates regeneration of phosphoenolpyruvate in mesophyll chloroplasts of Amaranthus tricolor. Plant Cell Physiol. 33: 1247-1250.
Murata S, Sekiya J 1992 Effects of sodium on photosynthesis in Panicum coloratum. Plant Cell Physiol. 33: 1239-1242.
Murchie EH, Ferrario-Mery S, Valadier MH, Foyer CH 2000 Short-term nitrogen-induced modulation of phosphoenolpyruvate carboxylase in tobacco and maize leaves. J. Exp. Bot. 51: 1349-1356.
Murmu J, Chinthapalli B, Raghavendra AS 2003 Marked modulation by phosphate of phosphoenolpyruvate carboxylase in leaves of Amaranthus hypochondriacus, a NAD-ME type C4 plant: decrease in malate sensitivity but no change in the phosphorylation status. J. Exp. Bot. 54: 2661-2668.
Nable RO, Brownell PF 1984 Effects of sodium nutrition and light upon the concentrations of alanine in leaves of C4 plants. Aust. J. Plant Physiol. 11: 319-324.
Nagata S, Wang YQ, Oshima A, Zhang L, Miyake H, Sasaki H, Ishida A 2007 Efficient cyclic system to yield ectoine using Brevibacterium sp. JCM 6894 subjected to osmotic downshock. Biotechnol. Bioeng. Aug 15 [Epub ahead of print].
Naidoo G 2006 Factors contributing to dwarfing in the mangrove Avicennia marina. Ann. Bot. (Lond.) 97: 1095-1101.
Naidu SL, Long SP 2004 Potential mechanisms of low-temperature tolerance of C4 photosynthesis in Miscanthus x giganteus: an in vivo analysis. Planta 220: 145-155.
Naidu SL, Moose SP, AL-Shoaibi AK, Raines CA, Long SP 2003 Cold tolerance of C4 photosynthesis in Miscanthus x giganteus: adaptation in amounts and sequence of C4 photosynthetic enzymes. Plant Physiol. 132: 1688-1697.
Nair RB, Xia Q, Kartha CJ, Kurylo E, Hirji RN, Datla R, Selvaraj G 2002 Arabidopsis CYP98A3 mediating aromatic 3-hydroxylation. Developmental regulation of the gene, and expression in yeast. Plant Physiol. 130: 210-220.
Naqvi SM, Harper A, Carter C, Ren G, Guirgis A, York WS, Thornburg RW 2005 Nectarin IV, a potent endoglucanase inhibitor secreted into the nectar of ornamental tobacco plants. Isolation, cloning, and characterization. Plant Physiol. 139: 1389-1400.
Nasution U, van Gulik WM, Proell A, van Winden WA, Heijnen JJ 2006 Generating short-term kinetic responses of primary metabolism of Penicillium chrysogenum through glucose perturbation in the bioscope mini reactor. Metab. Eng. 8: 395-405.
Neiman AM 1998 Prospore membrane formation defines a developmentally regulated branch of the secretory pathway in yeast. J. Cell Biol. 140: 29-37.
Nhiri M, Bakrim N, Bakrim N, El Hachimi-Messouak Z, Echevarria C, Vidal J 2000 Posttranslational regulation of phosphoenolpyruvate carboxylase during germination of Sorghum seeds: influence of NaCl and L-malate. Plant Sci. 151: 29-37.
Nhiri M, Bakrim N, Pacquit V, El Hachimi-Messouak Z, Osuna L, Vidal J 1998 Calcium-dependent and -independent phosphoenolpyruvate carboxylase kinases in Sorghum leaves. Plant Cell Physiol. 39: 241-246.
Nickell LG 1993 A tribute to Hugo P. Kortschak: The man, the scientist and the discoverer of C4 photosynthesis. Photosynth. Res. 35: 201-204.
Niklas KJ 2006 Plant allometry, leaf nitrogen and phosphorus stoichiometry, and interspecific trends in annual growth rates. Ann. Bot. (Lond.) 97: 155-163.
Nikovics K, Blein T, Peaucelle A, Ishida T, Morin H, Aida M, Laufs P 2006 The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis. Plant Cell 18: 2929-2945.
Nimmo GA, Wilkins MB, Nimmo HG 2001 Partial purification and characterization of a protein inhibitor of phosphoenolpyruvate carboxylase kinase. Planta 213: 250-257.
Niu S, Yuan Z, Zhang Y, Liu W, Zhang L, Huang J, Wan S 2005 Photosynthetic responses of C3 and C4 species to seasonal water variability and competition. J. Exp. Bot. 56: 2867-2876.
Niu X, Zheng W, Lu BR, Ren G, Huang W, Wang S, Liu J, Tang Z, Luo D, Wang Y, Liu Y 2007 An unusual posttranscriptional processing in two betaine aldehyde dehydrogenase loci of cereal crops directed by short, direct repeats in response to stress conditions. Plant Physiol. 143: 1929-1942.
No authors listed 2007 Proceedings of the 2nd International Conference on Integrated Approaches to Sustain and Improve Plant Production under Drought Stress, Rome, Italy, 24-28 September 2005. J. Exp. Bot. 58: 113-360.
Nomura M, Katayama K, Nishimura A, Ishida Y, Ohta S, Komari T, Miyao-Tokutomi M, Tajima S, Matsuoka M 2000 The promoter of rbcS in a C3 plant (rice) directs organ-specific, light-dependent expression in a C4 plant (maize), but does not confer bundle sheath cell-specific expression. Plant Mol. Biol. 44: 99-106.
Noriega X, Burgos B, Perez FJ 2007 Short day-photoperiod triggers and low temperatures increase expression of peroxidase RNA transcripts and basic peroxidase isoenzyme activity in grapevine buds. Phytochemistry 68: 1376-1383.
Norris SR, Barrette TR, DellaPenna D 1995 Genetic dissection of carotenoid synthesis in Arabidopsis defines plastoquinone as an essential component of phytoene desaturation. Plant Cell 7: 2139-2149.
Noy K, Fasulo D 2007 Improved model-based, platform-independent feature extraction for mass spectrometry. Bioinformatics Aug 13 [Epub ahead of print].
Oagawa N, Okumura S, Izui K 1992 A Ca2+-dependent protein kinase phosphorylates phosphoenolpyruvate carboxylase in maize. FEBS Lett. 302: 86-88.
Oberhuber W, Edwards GE 1993 Temperature dependence of the linkage of quantum yield of photosystem II to CO2 fixation in C4 and C3 plants. Plant Physiol. 101: 507-512.
Offermann S, Danker T, Dreymuller D, Kalamajka R, Topsch S, Weyand K, Peterhansel C 2006 Illumination is necessary and sufficient to induce histone acetylation independent of transcriptional activity at the c4-specific phosphoenolpyruvate carboxylase promoter in maize. Plant Physiol. 141: 1078-1088.
Ogee J, Cuntz M, Peylin P, Bariac T 2007 Non-steady-state, non-uniform transpiration rate and leaf anatomy effects on the progressive stable isotope enrichment of leaf water along monocot leaves. Plant Cell Environ. 30: 367-387.
Oh MK, Liao JC 2000 DNA microarray detection of metabolic responses to protein overproduction in Escherichia coli. Metab. Eng. 2: 201-209.
Okushima Y, Fukaki H, Onoda M, Theologis A, Tasaka M 2007 ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis. Plant Cell 19: 118-130.
Op de Beeck M, Low M, Verbeeck H, Deckmyn G 2007 Suitability of a combined stomatal conductance and photosynthesis model for calculation of leaf-level ozone fluxes. Plant Biol. (Stuttg.) 9: 331-341.
Osuna L, Pierre JN, Gonzalez MC, Alvarez R, Cejudo FJ, Echevarria C, Vidal J 1999 Evidence for a slow-turnover form of the Ca2+-independent phosphoenolpyruvate carboxylase kinase in the aleurone-endosperm tissue of germinating barley seeds. Plant Physiol. 119: 511-520.
Oue S, Okamoto A, Yano T, Kagamiyama H 2000 Cocrystallization of a mutant aspartate aminotransferase with a C5-dicarboxylic substrate analog: structural comparison with the enzyme-C4-dicarboxylic analog complex. J. Biochem. (Tokyo) 127: 337-343.
Ow DW 2007 GM maize from site-specific recombination technology, what next? Curr. Opin. Biotechnol. 18: 115-120.
Pail M, Peterbauer T, Seiboth B, Hametner C, Druzhinina I, Kubicek CP 2004 The metabolic role and evolution of L-arabinitol 4-dehydrogenase of Hypocrea jecorina. Eur. J. Biochem. 271: 1864-1872.
Park EJ, Jekncic Z, Chen TH, Murata N 2007 The codA transgene for glycinebetaine synthesis increases the size of flowers and fruits in tomato. Plant Biotechnol. J. 5: 422-430.
Park G, Xue C, Zhao X, Kim Y, Orbach M, Xu JR 2006 Multiple upstream signals converge on the adaptor protein Mst50 in Magnaporthe grisea. Plant Cell 18: 2822-2835.
Parsley K, Hibberd JM 2006 The Arabidopsis PPDK gene is transcribed from two promoters to produce differentially expressed transcripts responsible for cytosolic and plastidic proteins. Plant Mol. Biol. 62: 339-349.
Patel M, Corey AC, Yin LP, Ali S, Taylor WC, Berry JO 2004 Untranslated regions from C4 Amaranth AhRbcS1 mRNAs confer translational enhancement and preferential bundle sheath cell expression in transgenic C4 Flaveria bidentis. Plant Physiol. 136: 3550-3561.
Pawlik-Skowronska B 2001 Phytochelatin production in freshwater algae Stigeoclonium in response to heavy metals contained in mining water; effects of some environmental factors. Aquat. Toxicol. 52: 241-249.
Payne RJ, Bulloch EM, Abell AD, Abell C 2005 Design and synthesis of aromatic inhibitors of anthranilate synthase. Org. Biomol. Chem. 3: 3629-3635.
Pesci P, Reggiani R 1992 The process of abscisic acid-induced proline accumulation and the levels of polyamines and quaternary ammonium compounds in hydrated barley leaves. Physiol. Plant. 84: 134-139.
Peters-Wendisch PG, Wendisch VF, de Graaf AA, Eikmanns BJ, Sahm H 1996 C3-carboxylation as an anaplerotic reaction in phosphoenolpyruvate carboxylase-deficient Corynebacterium glutamicum. Arch. Microbiol. 165: 387-396.
Petersen S, de Graaf AA, Eggeling L, Mollney M, Wiechert W, Sahm H 2000 In vivo quantification of parallel and bidirectional fluxes in the anaplerosis of Corynebacterium glutamicum. J. Biol. Chem. 275: 35932-35941.
Petropoulou Y, Manetas Y, Gavalas NA 1990 Intact mesophyll protoplasts from Zea mays as a source of phosphoenolpyruvate carboxylase unaffected by extraction: Advantages and limitations. Physiol. Plant. 80: 605-611.
Pettersson G, Ryde-Pettersson U 1990 Model studies of the regulation of the Calvin photosynthesis cycle by cytosolic metabolites. Biomed. Biochim. Acta 49: 723-732.
Pfefferle W, Mockel B, Bathe B, Marx A 2003 Biotechnological manufacture of lysine. Adv. Biochem. Eng. Biotechnol. 79: 59-112.
Pfundel E, Nagel E, Meister A 1996 Analyzing the light energy distribution in the photosynthetic apparatus of C4 plants using highly purified mesophyll and bundle-sheath thylakoids. Plant Physiol. 112: 1055-1070.
Philippe H, Forterre P 1999 The rooting of the universal tree of life is not reliable. J. Mol. Evol. 49: 509-523.
Pichersky E, Lewinsohn E, Croteau R 1995 Purification and characterization of S-linalool synthase, an enzyme involved in the production of floral scent in Clarkia breweri. Arch. Biochem. Biophys. 316: 803-807.
Piermarini PM, Kim EY, Boron WF 2007 Evidence against a direct interaction between intracellular carbonic anhydrase II and pure C-terminal domains of SLC4 bicarbonate transporters. J. Biol. Chem. 282: 1409-1421.
Pinelli P, Loreto F 2003 12CO2 emission from different metabolic pathways measured in illuminated and darkened C3 and C4 leaves at low, atmospheric and elevated CO2 concentration. J. Exp. Bot. 54: 1761-1769.
Pinho PM, Naengchomnong W, Kijjoa A, Nazareth N, Silva AM, Eaton G, Herz W 2006 An unusual glucoside from Cleistanthus gracilis. Phytochemistry 67: 1789-1792.
Platt SG, Bassham JA 1978 Photosynthesis and increased production of protein. Adv. Exp. Med. Biol. 105: 195-247.
Podesta FE, Iglesias AA, Andreo CS 1990 Oligomeric enzymes in the C4 pathway of photosynthesis. Photosynth. Res. 26: 161-170.
Poole P, Allaway D 2000 Carbon and nitrogen metabolism in Rhizobium. Adv. Microb. Physiol. 43: 117-163.
Pracharoenwattana I, Cornah JE, Smith SM 2007 Arabidopsis peroxisomal malate dehydrogenase functions in beta-oxidation but not in the glyoxylate cycle. Plant J. 50: 381-390.
Prachyawarakorn V, Mahidol C, Ruchirawat S 2006 Pyranocoumarins from the twigs of Mammea siamensis. Phytochemistry 67: 924-928.
Prakash AP, Kush A, Lakshmanan P, Kumar PP 2003 Cytosine methylation occurs in a CDC48 homologue and a MADS-box gene during adventitious shoot induction in Petunia leaf explants. J. Exp. Bot. 54: 1361-1371.
Qin X, Soulard J, Laublin G, Morse D, Cappadocia M 2005 Molecular analysis of the conserved C4 region of the S11-RNase of Solanum chacoense. Planta 221: 531-537.
Rademacher T, Hausler RE, Hirsch HJ, Zhang L, Lipka V, Weier D, Kreuzaler F, Peterhansel C 2002 An engineered phosphoenolpyruvate carboxylase redirects carbon and nitrogen flow in transgenic potato plants. Plant J. 32: 25-39.
Raghavendra AS, Yin ZH, Heber U 1993 Liight-dependent pH changes in leaves of C4 plants. Comparison of the pH response to carbon dioxide and oxygen with that of C3 plants. Planta 189: 278-287.
Rajagopalan AV, Devi MT, Raghavendra AS 1994 Molecular biology of C4 phosphoenolpyruvate carboxylase: structure, regulation and genetic engineering. Photosynth. Res. 39: 115-135.
Rajagopalan AV, Gayathri J, Raghavendra AS 1998 Modulation by weak bases or weak acids of the pH of cell sap and phosphoenolpyruvate carboxylase activity in leaf discs of C4 plants. Physiol. Plant. 104: 456-462.
Rajagoplan AV, Devi MT, Raghavendra AS 1993 Patterns of phosphoenolpyruvate carboxylase activity and cytosolic pH during light activation and dark deactivation in C3 and C4 plants. Photosynth. Res. 38: 51-60.
Ramos RLB, Tovar FJ, Junqueira RM, Lino FB, Sachetto-Martins G 2001 Sugarcane expressed sequences tags (ESTs) encoding enzymes involved in lignin biosynthesis pathways. Genet. Mol. Biol. 24: 235-241.
Rancour DM, Dickey CE, Park S, Bednarek SY 2002 Characterization of AtCDC48. Evidence for multiple membrane fusion mechanisms at the plane of cell division in plants. Plant Physiol. 130: 1241-1253.
Randolph-Anderson BL, Sato R, Johnson AM, Harris EH, Hauser CR, Oeda K, Ishige F, Nishio S, Gillham NW, Boynton JE 1998 Isolation and characterization of a mutant protoporphyrinogen oxidase gene from Chlamydomonas reinhardtii conferring resistance to porphyric herbicides. Plant Mol. Biol. 38: 839-859.
Rao SK, Magnin NC, Reiskind JB, Bowes G 2002 Photosynthetic and other phosphoenolpyruvate carboxylase isoforms in the single-cell, facultative C(4) system of Hydrilla verticillata. Plant Physiol. 130: 876-886.
Rasmussen S, Dixon RA 1999 Transgene-mediated and elicitor-induced perturbation of metabolic channeling at the entry point into the phenylpropanoid pathway. Plant Cell 11: 1537-1552.
Ratcliffe RG 1994 In vivo NMR studies of higher plants and algae. Adv. Bot. Res. 20: 43-123.
Rathnam CK, Chollet R 1979 Photosynthetic carbon metabolism in Panicum milioides, a C3-C4 intermediate species: evidence for a limited C4 dicarboxylic acid pathway of photosynthesis. Biochim. Biophys. Acta 548: 500-519.
Rathnam CKM, Edwards GE 1976 Distribution of nitrate-assimilating enzymes between mesophyll protoplasts and bundle sheath cells in leaves of three groups of C4 plants. Plant Physiol. 57: 881-885.
Rebeille F, Hatch MD 1986 Regulation of NADP-malate dehydrogenase in C4 plants: relationship among enzyme activity, NADPH to NADP ratios, and thioredoxin redox states in intact maize mesophyll chloroplasts. Arch. Biochem. Biophys. 249: 171-179.
Rebeille F, Hatch MD 1986 Regulation of NADP-malate dehydrogenase in C4 plants: effect of varying NADPH to NADP ratios and thioredoxin redox state on enzyme activity in reconstituted systems. Arch. Biochem. Biophys. 249: 164-170.
Reed JL, Patel TR, Chen KH, Joyce AR, Applebee MK, Herring CD, Bui OT, Knight EM, Fong SS, Palsson BO 2006 Systems approach to refining genome annotation. Proc. Natl. Acad. Sci. U.S.A. 103: 17480-17484.
Reggiani R, Aurisano N, Mattana M, Bertani A 1993 ABA induces 4-aminobutyrate accumulation in wheat seedlings. Phytochemistry 34: 605-609.
Reinfelder JR, Milligan AJ, Morel FM 2004 The role of the C4 pathway in carbon accumulation and fixation in a marine diatom. Plant Physiol. 135: 2106-2111.
Reis VM, dos Reis FB, Quesada DM, de Oliveira OCA, Alves BJR, Urquiaga S, Boddey RM 2001 Biological nitrogen fixation associated with tropical pasture grasses. Aust. J. Plant Physiol. 28: 837-844.
Renne P, Dressen U, Hebbeker U, Hille D, Flugge UI, Westhoff P, Weber AP 2003 The Arabidopsis mutant dct is deficient in the plastidic glutamate/malate translocator DiT2. Plant J. 35: 316-331.
Reyes-Prieto A, Weber AP, Bhattacharya D 2007 The origin and establishment of the plastid in algae and plants. Annu. Rev. Genet. Jun 28 [Epub ahead of print].
Rezanka T, Sigler K 2006 Identification of very long chain fatty acids from sugar cane wax by atmospheric pressure chemical ionization liquid chromatography-mass spectroscopy. Phytochemistry 67: 916-923.
Richardt S, Lang D, Reski R, Frank W, Rensing SA 2007 PlanTAPDB, a phylogeny-based resource of plant transcription-associated proteins. Plant Physiol. 143: 1452-1466.
Richman A, Swanson A, Humphrey T, Chapman R, McGarvey B, Pocs R, Brandle J 2005 Functional genomics uncovers three glucosyltransferases involved in the synthesis of the major sweet glucosides of Stevia rebaudiana. Plant J. 41: 56-67.
Rieder C, Eisenreich W, O'Brien J, Richter G, Gotze E, Boyle P, Blanchard S, Bacher A, Simon H 1998 Rearrangement reactions in the biosynthesis of molybdopterin--an NMR study with multiply 13C/15N labelled precursors. Eur. J. Biochem. 255: 24-36.
Rienties IM, Vink J, Borst JW, Russinova E, de Vries SC 2005 The Arabidopsis SERK1 protein interacts with the AAA-ATPase AtCDC48, the 14-3-3 protein GF14lambda and the PP2C phosphatase KAPP. Planta 221: 394-405.
Ripley BS, Gilbert ME, Ibrahim DG, Osborne CP 2007 Drought constraints on C4 photosynthesis: stomatal and metabolic limitations in C3 and C4 subspecies of Alloteropsis semialata. J. Exp. Bot. 58: 1351-1363.
Rivero-Cruz B, Rivero-Cruz I, Rodriguez-Sotres R, Mata R 2007 Effect of natural and synthetic benzyl benzoates on calmodulin. Phytochemistry 68: 1147-1155.
Ro DK, Ehlting J, Douglas CJ 2002 Cloning, functional expression, and subcellular localization of multiple NADPH-cytochrome P450 reductases from hybrid poplar. Plant Physiol. 130: 1837-1851.
Ro DK, Mah N, Ellis BE, Douglas CJ 2001 Functional characterization and subcellular localization of poplar (Populus trichocarpa x Populus deltoides) cinnamate 4-hydroxylase. Plant Physiol. 126: 317-329.
Roberts K, Granum E, Leegood RC, Raven JA 2007 C3 and C4 pathways of photosynthetic carbon assimilation in marine diatoms are under genetic, not environmental, control. Plant Physiol. 145: 230-235.
Rodrigues FD, de Souza SR, Rodrigues FD, Fernandes MS 2004 Nitrogen metabolism in rice cultivated under seasonal flush of nitrate. J. Plant Nutr. 27: 395-409.
Rojas MC, Urrutia O, Cruz C, Gaskin P, Tudzynski B, Hedden P 2004 Kaurenolides and fujenoic acids are side products of the gibberellin P450-1 monooxygenase in Gibberella fujikuroi. Phytochemistry 65: 821-830.
Romanowska E, Igamberdiev AU, Parys E, Gardestrom P 2002 Stimulation of respiration by Pb2+ in detached leaves and mitochondria of C3 and C4 plants. Physiol. Plant. 116: 148-154.
Rondeau P, Rouch C, Besnard G 2005 NADP-malate dehydrogenase gene evolution in Andropogoneae (Poaceae): gene duplication followed by sub-functionalization. Ann. Bot. (Lond.) 96: 1307-1314.
Rosche E, Chitty J, Westhoff P, Taylor WC 1998 Analysis of promoter activity for the gene encoding pyruvate orthophosphate dikinase in stably transformed C4 Flaveria species. Plant Physiol. 117: 821-829.
Rossini L, Cribb L, Martin DJ, Langdale JA 2001 The maize golden2 gene defines a novel class of transcriptional regulators in plants. Plant Cell 13: 1231-1244.
Roth R, Sawers RJ, Munn HL, Langdale JA 2001 Plastids undifferentiated, a nuclear mutation that disrupts plastid differentiation in Zea mays L. Planta 213: 647-658.
Rouhier N, Kauffmann B, Tete-Favier F, Paladino P, Gans P, Branlant G, Jacquot JP, Boschi-Muller S 2007 Functional and structural aspects of poplar cytosolic and plastidial type a methionine sulfoxide reductases. J. Biol. Chem. 282: 3367-3378.
Ruelland E, Miginiac-Maslow M 1999 Regulation of chloroplast enzyme activities by thioredoxins: activation or relief from inhibition? Trends Plant Sci. 4: 136-141.
Rylott EL, Metzlaff K, Rawsthorne S 1998 Developmental and environmental effects on the expression of the C3-C4 intermediate phenotype in Moricandia arvensis. Plant Physiol. 118: 1277-1284.
Sage RF 2002 Variation in the k(cat) of Rubisco in C3 and C4 plants and some implications for photosynthetic performance at high and low temperature. J. Exp. Bot. 53: 609-620.
Sage RF, Kubien DS 2007 The temperature response of C(3) and C(4) photosynthesis. Plant Cell Environ. 30: 1086-1106.
Sage RF, McKown AD 2006 Is C4 photosynthesis less phenotypically plastic than C3 photosynthesis? J. Exp. Bot. 57: 303-317.
Sage RF, Seemann JR 1993 Regulation of ribulose-1,5-bisphosphate carboxylase/oxygenase activity in response to reduced light intensity in C4 plants. Plant Physiol. 102: 21-28.
Sahm H, Eggeling L, de Graaf AA 2000 Pathway analysis and metabolic engineering in Corynebacterium glutamicum. Biol. Chem. 381: 899-910.
Saigo M, Bologna FP, Maurino VG, Detarsio E, Andreo CS, Drincovich MF 2004 Maize recombinant non-C4 NADP-malic enzyme: a novel dimeric malic enzyme with high specific activity. Plant Mol. Biol. 55: 97-107.
Saltveit ME, Choi YJ, Tomas-Barberan FA 2005 Mono-carboxylic acids and their salts inhibit wound-induced phenolic accumulation in excised lettuce (Lactuca sativa) leaf tissue. Physiol. Plant. 125: 454-463.
Salvucci ME, Crafts-Brandner SJ 2004 Inhibition of photosynthesis by heat stress: the activation state of Rubisco as a limiting factor in photosynthesis. Physiol. Plant. 120: 179-186.
Salzman RA, Brady JA, Finlayson SA, Buchanan CD, Summer EJ, Sun F, Klein PE, Klein RR, Pratt LH, Cordonnier-Pratt MM, Mullet JE 2005 Transcriptional profiling of sorghum induced by methyl jasmonate, salicylic acid, and aminocyclopropane carboxylic acid reveals cooperative regulation and novel gene responses. Plant Physiol. 138: 352-368.
Samaras Y, Manetas Y 1988 Regulation of C4-phosphoenolpyruvate carboxylase activity by ambient CO2. Photosynth. Res. 18: 299-305.
Sanchez R, Cejudo FJ 2003 Identification and expression analysis of a gene encoding a bacterial-type phosphoenolpyruvate carboxylase from Arabidopsis and rice. Plant Physiol. 132: 949-957.
Sanchez R, Flores A, Cejudo FJ 2006 Arabidopsis phosphoenolpyruvate carboxylase genes encode immunologically unrelated polypeptides and are differentially expressed in response to drought and salt stress. Planta 223: 901-909.
Santos PM, Thornton B, Corsi M 2002 Nitrogen dynamics in the intact grasses Poa trivialis and Panicum maximum receiving contrasting supplies of nitrogen. J. Exp. Bot. 53: 2167-2176.
Sarath G, Hou G, Baird LM, Mitchell RB 2007 Reactive oxygen species, ABA and nitric oxide interactions on the germination of warm-season C4-grasses. Planta 226: 697-708.
Scapin G, Reddy SG, Blanchard JS 1996 Three-dimensional structure of meso-diaminopimelic acid dehydrogenase from Corynebacterium glutamicum. Biochemistry 35: 13540-13551.
Schaffner AR, Sheen J 1992 Maize C4 photosynthesis involves differential regulation of phosphoenolpyruvate carboxylase genes. Plant J. 2: 221-232.
Schmidt K, Heberle B, Kurrasch J, Nehls R, Stahl DJ 2004 Suppression of phenylalanine ammonia lyase expression in sugar beet by the fungal pathogen Cercospora beticola is mediated at the core promoter of the gene. Plant Mol. Biol. 55: 835-852.
Schoch GA, Nikov GN, Alworth WL, Werck-Reichhart D 2002 Chemical inactivation of the cinnamate 4-hydroxylase allows for the accumulation of salicylic acid in elicited cells. Plant Physiol. 130: 1022-1031.
Schrock RR 2006 Reduction of dinitrogen. Proc. Natl. Acad. Sci. U.S.A. 103: 17087.
Schutt BS, Abbadi A, Loddenkotter B, Brummel M, Spener F 2002 beta-Ketoacyl-acyl carrier protein synthase IV: a key enzyme for regulation of medium-chain fatty acid synthesis in Cuphea lanceolata seeds. Planta 215: 847-854.
Schwalbe RA, Dahlback B, Coe JE, Nelsestuen GL 1992 Pentraxin family of proteins interact specifically with phosphorylcholine and or phosphorylethanolamine. Biochemistry 31: 4907-4915.
Sebastian RL, Kearsey MJ, King GJ 2002 Identification of quantitative trait loci controlling developmental characteristics of Brassica oleracea L.. Theor. Appl. Genet. 104: 601-609.
Sebela M, Frebort I, Lemr K, Brauner F, Pec P 2000 A study on the reactions of plant copper amine oxidase with C3 and C4 aliphatic diamines. Arch. Biochem. Biophys. 384: 88-99.
Seibt U, Wingate L, Berry JA, Lloyd J 2006 Non-steady state effects in diurnal 180 discrimination by Picea sitchensis branches in the field. Plant Cell Environ. 29: 928-939.
Seneweera S, Ghannoum O, Conroy JP 2001 Root and shoot factors contribute to the effect of drought on photosynthesis and growth of the C4 grass Panicum coloratum at elevated CO2 partial pressures. Aust. J. Plant Physiol. 28: 451-460.
Sewalt VJH, Ni WT, Blount JW, Jung HG, Masoud SA, Howles PA, Lamb C, Dixon RA 1997 Reduced lignin content and altered lignin composition in transgenic tobacco down-regulated in expression of L-phenylalanine ammonia-lyase or cinnamate 4-hydroxylase. Plant Physiol. 115: 41-50.
Shahollari B, Vadassery J, Varma A, Oelmuller R 2007 A leucine-rich repeat protein is required for growth promotion and enhanced seed production mediated by the endophytic fungus Piriformospora indica in Arabidopsis thaliana. Plant J. 50: 1-13.
Sharath AN, Weinhold E, Bhagwat AS 2000 Reviving a dead enzyme: cytosine deaminations promoted by an inactive DNA methyltransferase and an S-adenosylmethionine analogue. Biochemistry 39: 14611-14616.
Sharma PK, Hall DO 1991 Interaction of salt stress and photoinhibition on photosynthesis in barley and sorghum. J. Plant Physiol. 138: 614-619.
Sheen J 1999 C4 gene expression. Annu. Rev. Plant Physiol. Plant Mol. Biol. 50: 187-217.
Sheen J 1991 Molecular mechanisms underlying the differential expression of maize pyruvate, orthophosphate dikinase genes. Plant Cell 3: 225-245.
Shenton M, Fontaine V, Hartwell J, Marsh JT, Jenkins GI, Nimmo HG 2006 Distinct patterns of control and expression amongst members of the PEP carboxylase kinase gene family in C plants. Plant J. 48: 45-53.
Shimada H, Ohno R, Shibata M, Ikegami I, Onai K, Ohto MA, Takamiya K 2005 Inactivation and deficiency of core proteins of photosystems I and II caused by genetical phylloquinone and plastoquinone deficiency but retained lamellar structure in a T-DNA mutant of Arabidopsis. Plant J. 41: 627-637.
Shimura H, Matsuura M, Takada N, Koda Y 2007 An antifungal compound involved in symbiotic germination of Cypripedium macranthos var. rebunense (Orchidaceae). Phytochemistry 68: 1442-1447.
Shin HC, Shim HO, Ahn SC, Cho JH, Chung MK, Han SS, Roh JK 1998 Pharmacokinetic analysis for assessing developmental toxicity of a new synthetic acetolactate synthase inhibitor, LGC-40863, in rats. J. Pharmacol. Exp. Ther. 285: 795-799.
Shin HJ, Chong CK, Chang SI, Choi JD 2000 Structural and functional role of cysteinyl residues in tobacco acetolactate synthase. Biochem. Biophys. Res. Commun. 271: 801-806.
Shipley B 2007 Comparative plant ecology as a tool for integrating across scales. Ann. Bot. (Lond.) 99: 965-966.
Shu G, Pontieri V, Dengler NG, Mets LJ 1999 Light induction of cell type differentiation and cell-type-specific gene expression in cotyledo |